FC869090

Overview
NameFC869090
Unique NameFC869090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMM (Chaperone protein dnaK2 OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 9.301e-63
Identity = 109/180 (60.56%), Postives = 145/180 (80.56%), Query Frame = 3
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVS+LE+ +GVFEV +T+GDT LGG+DFD  +++ L + FK  EGIDL +D+ ALQRL EAAEKAKIELSS TQ++INLPFITA + G KHL++TLTR+KFE L + LI+R R P +  LKDA +++ ++DE+++VGG +R+P VQE+V  + GK P++ VNPDE VA+GAAIQ
Sbjct:  193 LGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKVIVDHLAATFKANEGIDLRQDKQALQRLTEAAEKAKIELSSATQSEINLPFITATSEGPKHLDLTLTRAKFEELASKLIDRCRVPVEQALKDAKLSSGELDEIVMVGGSSRMPAVQELVKRVTGKDPNQTVNPDEVVAVGAAIQ 372          

HSP 2 Score: 34.2686 bits (77), Expect = 9.301e-63
Identity = 14/19 (73.68%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L G+VK++LLLDVTPL
Sbjct:  373 GGVLAGEVKDILLLDVTPL 391          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_PASMU (Chaperone protein dnaK OS=Pasteurella multocida GN=dnaK PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.301e-63
Identity = 112/184 (60.87%), Postives = 141/184 (76.63%), Query Frame = 3
Query:    3 LGGGTFDVSILEISN----GVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFD+SI+EI        FEV +TNGDT LGGEDFDN ++ +LV EFK+ +G+DL  D LA+QRL+EA EKAKIELSS  QTD+NLP+ITADA+G KHLNI LTR+K E+LV +L+ R+  P K  L DA ++   +D+V+LVGG TR+P VQ+ V   FGK+P K VNPDEAVA+GAA+Q
Sbjct:  195 LGGGTFDLSIIEIDEVGGEKTFEVLSTNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNLPYITADATGPKHLNIKLTRAKLESLVEDLVSRSLEPVKIALADAGLSVSQIDDVILVGGQTRMPLVQQKVEAFFGKAPRKDVNPDEAVAIGAAVQ 378          

HSP 2 Score: 35.4242 bits (80), Expect = 9.301e-63
Identity = 15/19 (78.95%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L GDVK++LLLDVTPL
Sbjct:  379 GGVLAGDVKDVLLLDVTPL 397          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK1_VIBF1 (Chaperone protein dnaK 1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.301e-63
Identity = 113/184 (61.41%), Postives = 141/184 (76.63%), Query Frame = 3
Query:    3 LGGGTFDVSILEISN----GVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFD+SI+EI N      FEV ATNGDT LGGEDFDN L+ FLV EFK+ +G DL  D LA+QR++EAAEKAKIELSS  QTD+NLP++TADA+G KH+NI +TR+K E+LV +L+ RT  P K  L DA++T   + +V+LVGG TR+P VQ  V+E FGK   + VNPDEAVA+GAA+Q
Sbjct:  194 LGGGTFDISIIEIDNVDGEQTFEVLATNGDTHLGGEDFDNRLINFLVDEFKKEQGFDLKNDPLAMQRVKEAAEKAKIELSSAQQTDVNLPYVTADATGPKHMNIKVTRAKLESLVEDLVVRTLEPLKVALADADLTIDGITDVILVGGQTRMPMVQAKVAEFFGKEARRDVNPDEAVAMGAAVQ 377          

HSP 2 Score: 35.4242 bits (80), Expect = 9.301e-63
Identity = 15/19 (78.95%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L GDVK++LLLDVTPL
Sbjct:  378 GGVLAGDVKDVLLLDVTPL 396          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_PROMT (Chaperone protein dnaK OS=Prochlorococcus marinus (strain NATL2A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 9.302e-63
Identity = 110/180 (61.11%), Postives = 143/180 (79.44%), Query Frame = 3
Query:    3 LGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVS+LE+ +GVFEV +T+GDT LGG+DFD  +++ L S FK  EGIDL +D+ ALQRL EAAEKAKIELS+ TQ++INLPFITA   G KHL++TLTR KFE L +NLI+R R P +  LKDA ++T ++DE+++VGG TR+P V+E+V  +  K P++ VNPDE VA+GAAIQ
Sbjct:  193 LGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDRVIVDHLASTFKGNEGIDLRQDKQALQRLTEAAEKAKIELSNATQSEINLPFITATPEGPKHLDLTLTRGKFEELASNLIDRCRVPVEQALKDAKLSTGEIDEIVMVGGSTRMPAVKELVKRVTTKDPNQTVNPDEVVAVGAAIQ 372          

HSP 2 Score: 34.2686 bits (77), Expect = 9.302e-63
Identity = 14/19 (73.68%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L G+VK++LLLDVTPL
Sbjct:  373 GGVLAGEVKDILLLDVTPL 391          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_PSEP1 (Chaperone protein dnaK OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=dnaK PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 9.304e-63
Identity = 115/184 (62.50%), Postives = 144/184 (78.26%), Query Frame = 3
Query:    3 LGGGTFDVSILEISN----GVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFDVS++EI+       FEV ATNGDTFLGGEDFD  L+++LV EFK+  G+DL  D LALQRL+EAAEKAKIELSS   TD+NLP+ITADA+G KHLN+ ++R+K E+LV +L++RT  PC+  LKDA I    +D+V+LVGG TR+P VQ+ V++ FGK   K VNPDEAVA+GAAIQ
Sbjct:  195 LGGGTFDVSVIEIAEVDGEHQFEVLATNGDTFLGGEDFDMRLIDYLVDEFKKESGMDLKNDPLALQRLKEAAEKAKIELSSAQSTDVNLPYITADATGPKHLNVKISRAKLESLVEDLVKRTIEPCRIALKDAGIDASKIDDVILVGGQTRMPLVQKEVADFFGKEARKDVNPDEAVAMGAAIQ 378          

HSP 2 Score: 31.5722 bits (70), Expect = 9.304e-63
Identity = 13/19 (68.42%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  542 GGILRGDVKELLLLDVTPL 598
            G +L GDVK++LLLDV+PL
Sbjct:  379 GAVLAGDVKDVLLLDVSPL 397          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_ERWCT (Chaperone protein dnaK OS=Erwinia carotovora subsp. atroseptica GN=dnaK PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.213e-62
Identity = 112/184 (60.87%), Postives = 142/184 (77.17%), Query Frame = 3
Query:    3 LGGGTFDVSILEISN----GVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFD+SI+EI        FEV ATNGDT LGGEDFDN ++ +LV EFK+ +G DL  D LA+QRL+EAAEKAKIELSS  QTD+NLP+ITADA+G KHLNI +TR+K E+LV  L+ R+  P K  L+DA ++  ++ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+Q
Sbjct:  195 LGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDNRMINYLVDEFKKEQGFDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHLNIKVTRAKLESLVEELVNRSLEPLKVALQDAGLSVSEIQDVILVGGQTRMPLVQKKVADFFGKEPRKDVNPDEAVAIGAAVQ 378          

HSP 2 Score: 33.8834 bits (76), Expect = 1.213e-62
Identity = 14/19 (73.68%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L GDVK++LLLDV+PL
Sbjct:  379 GGVLSGDVKDVLLLDVSPL 397          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK1_COLP3 (Chaperone protein dnaK 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.549e-62
Identity = 119/184 (64.67%), Postives = 146/184 (79.35%), Query Frame = 3
Query:    3 LGGGTFDVSILEISN----GVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFD+SI+EISN      FEV ATNGDTFLGGEDFD  L+ +L  EFK+  GID+ +D LALQR++EAAEKAKIELSS  QT++NLP++TADASG KHLN+ +TR+K E+LV++L++ T APC+  LKDA ++  DV EV+LVGG TR+PKVQE V   F K P K VNPDEAVA+GAAIQ
Sbjct:  195 LGGGTFDLSIIEISNVDGEKQFEVLATNGDTFLGGEDFDLRLINYLADEFKKESGIDIHQDTLALQRIKEAAEKAKIELSSALQTEVNLPYVTADASGPKHLNVKVTRAKLESLVDDLVKSTIAPCEQALKDAGLSKADVSEVILVGGQTRMPKVQEAVKTFFSKEPRKDVNPDEAVAMGAAIQ 378          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPA (Chaperone protein dnaK OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.581e-62
Identity = 113/184 (61.41%), Postives = 147/184 (79.89%), Query Frame = 3
Query:    3 LGGGTFDVSILEISN----GVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFD+SI+EI +      FEV ATNGDT LGGEDFDN ++++L  EFK+ +G+DL  D LA+QRL+EAAEKAKIELSSTTQT++NLP+ITADA+G KHL + +TR+K E+LV +LI+R+  P K  L DA+++  D++EV+LVGG TR+PKV+E VS  FGK   + VNPDEAVA+GAA+Q
Sbjct:  194 LGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRMIKYLADEFKKEQGLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNLPYITADATGPKHLVVKITRAKLESLVEDLIKRSLEPLKVALADADLSVSDINEVILVGGQTRMPKVREEVSAFFGKELRQDVNPDEAVAIGAAVQ 377          

HSP 2 Score: 33.113 bits (74), Expect = 1.581e-62
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 2
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L GDVK++LLLDVTPL
Sbjct:  379 GVLSGDVKDVLLLDVTPL 396          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_SHEHH (Chaperone protein dnaK OS=Shewanella halifaxensis (strain HAW-EB4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.581e-62
Identity = 113/184 (61.41%), Postives = 147/184 (79.89%), Query Frame = 3
Query:    3 LGGGTFDVSILEISN----GVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFD+SI+EI +      FEV ATNGDT LGGEDFDN ++++L  EFK+ +G+DL  D LA+QRL+EAAEKAKIELSSTTQT++NLP+ITADA+G KHL + +TR+K E+LV +LI+R+  P K  L DA+++  D++EV+LVGG TR+PKV+E VS  FGK   + VNPDEAVA+GAA+Q
Sbjct:  194 LGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRMIKYLADEFKKEQGLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNLPYITADATGPKHLVVKITRAKLESLVEDLIKRSLEPLKVALADADLSVSDINEVILVGGQTRMPKVREEVSAFFGKELRQDVNPDEAVAIGAAVQ 377          

HSP 2 Score: 33.113 bits (74), Expect = 1.581e-62
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 2
Query:  545 GILRGDVKELLLLDVTPL 598
            G+L GDVK++LLLDVTPL
Sbjct:  379 GVLSGDVKDVLLLDVTPL 396          
BLAST of FC869090 vs. ExPASy Swiss-Prot
Match: DNAK_YERPY (Chaperone protein dnaK OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=dnaK PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.581e-62
Identity = 112/184 (60.87%), Postives = 143/184 (77.72%), Query Frame = 3
Query:    3 LGGGTFDVSILEISN----GVFEVKATNGDTFLGGEDFDNTLLEFLVSEFKRTEGIDLSKDRLALQRLREAAEKAKIELSSTTQTDINLPFITADASGAKHLNITLTRSKFETLVNNLIERTRAPCKNCLKDANITTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQ 542
            LGGGTFD+SI+EI        FEV ATNGDT LGGEDFD+ L+ +LV EFK+ +G+DL  D LA+QRL+EAAEKAKIELSS  QTD+NLP+ITAD SG KH+NI +TR+K E+LV +L+ R+  P K  L+DA ++  D+ +V+LVGG TR+P VQ+ V++ FGK P K VNPDEAVA+GAA+Q
Sbjct:  195 LGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGMDLRTDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADGSGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVADFFGKEPRKDVNPDEAVAIGAAVQ 378          

HSP 2 Score: 33.8834 bits (76), Expect = 1.581e-62
Identity = 14/19 (73.68%), Postives = 18/19 (94.74%), Query Frame = 2
Query:  542 GGILRGDVKELLLLDVTPL 598
            GG+L G+VK++LLLDVTPL
Sbjct:  379 GGVLSGEVKDVLLLDVTPL 397          
The following BLAST results are available for this feature:
BLAST of FC869090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK2_PROMM9.301e-6360.56Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_PASMU9.301e-6360.87Chaperone protein dnaK OS=Pasteurella multocida GN... [more]
DNAK1_VIBF19.301e-6361.41Chaperone protein dnaK 1 OS=Vibrio fischeri (strai... [more]
DNAK_PROMT9.302e-6361.11Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK_PSEP19.304e-6362.50Chaperone protein dnaK OS=Pseudomonas putida (stra... [more]
DNAK_ERWCT1.213e-6260.87Chaperone protein dnaK OS=Erwinia carotovora subsp... [more]
DNAK1_COLP31.549e-6264.67Chaperone protein dnaK 1 OS=Colwellia psychrerythr... [more]
DNAK_SHEPA1.581e-6261.41Chaperone protein dnaK OS=Shewanella pealeana (str... [more]
DNAK_SHEHH1.581e-6261.41Chaperone protein dnaK OS=Shewanella halifaxensis ... [more]
DNAK_YERPY1.581e-6260.87Chaperone protein dnaK OS=Yersinia pseudotuberculo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31008D09EF AbioticL1 Citrus clementina cDNA clone C31008D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869090 ID=FC869090; Name=FC869090; organism=Citrus clementina; type=EST; length=598bp
ATCTTGGTGGCGGAACATTTGATGTCTCAATCCTTGAAATTTCTAATGGA
GTATTTGAGGTGAAAGCAACAAATGGTGACACGTTCTTGGGGGGAGAGGA
TTTTGACAACACTTTGTTGGAGTTTTTAGTGAGTGAATTTAAGAGGACCG
AAGGAATTGATCTGTCAAAGGATAGGCTTGCATTGCAGAGGCTTCGTGAG
GCTGCCGAGAAGGCGAAGATTGAACTTTCATCAACAACCCAGACTGACAT
TAATCTTCCATTCATCACAGCTGATGCGTCAGGTGCAAAGCATTTGAATA
TCACACTTACTAGATCCAAATTTGAGACTTTGGTGAATAACCTGATTGAG
AGGACCAGAGCCCCTTGTAAGAACTGTTTGAAGGATGCCAACATTACCAC
AAAGGATGTGGATGAGGTGCTTTTGGTTGGAGGAATGACCCGTGTGCCAA
AGGTGCAGGAAGTGGTCTCAGAAATCTTTGGTAAGAGTCCAAGCAAGGGA
GTAAATCCTGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAGGTGGTATT
CTTCGTGGCGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTG
back to top