FC869095

Overview
NameFC869095
Unique NameFC869095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC869095_ssr31 microsatellite FC869095_ssr31:31..40. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:5..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_GEOUR (Enolase OS=Geobacter uraniireducens (strain Rf4) GN=eno PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 3.136e-43
Identity = 100/181 (55.25%), Postives = 121/181 (66.85%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSF 630
            IT V AR+I DSRGNPT+EV+V    G + RAAVPSGASTG  EALELRDG    YLGKGV KAV+NVN II   + G + T+Q  ID  M+  LDG   E+   K KLGANAIL VSLAV KA A    + LY++I    G+    LP+P  N+INGG+HA N + + EFMI+P GA +F
Sbjct:    4 ITDVYAREILDSRGNPTLEVEVFLESGAMGRAAVPSGASTGEREALELRDGDKGRYLGKGVLKAVANVNDIIADEVIGMEATDQVGIDRKML-DLDG--TEY---KSKLGANAILGVSLAVAKAAADEVGLSLYQYI---GGSNAKELPLPMMNIINGGAHADNNVDIQEFMIMPAGAKNF 175          

HSP 2 Score: 29.6462 bits (65), Expect = 3.136e-43
Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F EA++MG E++H LKAV+
Sbjct:  175 FAEALRMGAEIFHALKAVL 193          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_HYPNA (Enolase OS=Hyphomonas neptunium (strain ATCC 15444) GN=eno PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.136e-43
Identity = 100/183 (54.64%), Postives = 117/183 (63.93%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            I  + AR+I DSRGNPT+EVDVT  DG   RAAVPSGASTG YEA E RDG  + Y GKGV KAV  VN  I   LAG D TEQ  +D  M+  LDG  N     K +LGANAIL VSLAV KA A    +PLY++   L G    +LP P  N+INGG+HA N + + EFMI+PV A S  +
Sbjct:    4 IIDIHAREILDSRGNPTIEVDVTLDDGSTGRAAVPSGASTGAYEAHEQRDGDKARYNGKGVLKAVDAVNGEICNELAGMDATEQRLVDTLMI-DLDGTEN-----KSRLGANAILGVSLAVAKAAAESSALPLYRY---LGGANARILPTPMMNIINGGAHADNPVDIQEFMIMPVSAESISE 177          

HSP 2 Score: 24.2534 bits (51), Expect = 3.136e-43
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  633 EAMKMGVEVYHHLKAVI 683
            EA++MG EV+H LK  +
Sbjct:  177 EAVRMGAEVFHALKKTL 193          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_SYNFM (Enolase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=eno PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.136e-43
Identity = 96/181 (53.04%), Postives = 123/181 (67.96%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSF 630
            I +VKAR+I DSRGNPTVE +V    G+   AAVPSGASTG  EALELRDG  + YLGKGV +AV NVN  I P + G D  +Q  +D++++ +LDG  N     K +LGANAIL+VS+A  KA A   ++PLY++   L G    +LPVP  NVINGG+HA N + + EFMI+P GA +F
Sbjct:    4 ILSVKAREILDSRGNPTVEAEVILDSGYSGTAAVPSGASTGSREALELRDGDPARYLGKGVLQAVQNVNDEIAPKVIGMDGRDQVGLDSFLI-ELDGTEN-----KGRLGANAILSVSMAAAKAAAAECELPLYRY---LGGAMASLLPVPMMNVINGGAHADNNVDIQEFMIVPAGAPTF 175          

HSP 2 Score: 27.335 bits (59), Expect = 3.136e-43
Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F EA++MG E +H+LK V+
Sbjct:  175 FGEALRMGAETFHNLKKVL 193          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_MYCGA (Enolase OS=Mycoplasma gallisepticum GN=eno PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.600e-43
Identity = 99/187 (52.94%), Postives = 124/187 (66.31%), Query Frame = 1
Query:   85 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSG---NKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            + I +V A Q FDSRG PTV  +V  +DG    + V SGASTG  EALELRDGG+ Y GKGV+KAV+N+N  IGP + G D T QT ID +M+ +LDG        K KLGANAILAVS+AVC+A A    +PLY++IA+        + +LPVP  NVINGG+HA N +   EFMI+PVGA +  K
Sbjct:   13 LEIKSVFAYQAFDSRGFPTVACEVVLNDGSKGLSMVSSGASTGEKEALELRDGGTKYHGKGVTKAVNNINKKIGPKILGVDATLQTQIDEFMI-ELDGTKT-----KAKLGANAILAVSMAVCRAAAKSLNLPLYQYIAKKVAKVKGADFILPVPMLNVINGGAHADNTIDFQEFMIMPVGAKTMAK 193          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_SYNS9 (Enolase OS=Synechococcus sp. (strain CC9902) GN=eno PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.086e-43
Identity = 93/184 (50.54%), Postives = 122/184 (66.30%), Query Frame = 1
Query:   85 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            + I  + AR++ DSRGNPTVE +V    G + RA VPSGASTG +EA ELRDGG  Y+GKGVS+AV+++   I PAL G    +Q A+D  M+ +LDG  N     K  LGAN+ILAVS+A  +A A+   +PLY++   L G    +LPVP  NVINGG+HA N L   EFM++P GA SF++
Sbjct:    7 LVIDTIVAREVLDSRGNPTVEAEVLLEGGAMGRAIVPSGASTGAHEAHELRDGGKRYMGKGVSQAVTHIEERIAPALCGLSALDQAAVDAAML-ELDGSDN-----KSNLGANSILAVSMATARAAANGLGLPLYRY---LGGPLANLLPVPLMNVINGGAHAANSLDFQEFMLVPHGAPSFRE 181          

HSP 2 Score: 27.335 bits (59), Expect = 4.086e-43
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EA++MG EV+H LK ++
Sbjct:  179 FREALRMGTEVFHTLKDLL 197          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_MYCA9 (Enolase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=eno PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.086e-43
Identity = 95/183 (51.91%), Postives = 123/183 (67.21%), Query Frame = 1
Query:  100 VKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKKP*RW 648
            V AR+I DSRGNPTVEV+V  +DG  ARAAVPSGASTG +EA+ELRDG + Y GKGV+KAV+ V   I PA+ G+   +Q  ID  ++  LDG  +     K +LGANAIL VSLAV KA A    + L+++   L G    +LPVP  N++NGG+HA   + + EFM+ P+GA SFK+  RW
Sbjct:    7 VGAREILDSRGNPTVEVEVALTDGTFARAAVPSGASTGEHEAVELRDGDARYGGKGVTKAVNAVLDEIAPAIIGESADDQRLIDQALL-DLDGTPD-----KSRLGANAILGVSLAVAKAAADSAGLALFRY---LGGPNAHILPVPMMNILNGGAHADTGVDVQEFMVAPIGAPSFKESLRW 180          

HSP 2 Score: 28.1054 bits (61), Expect = 4.086e-43
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+E+++ G EVYH LK+V+
Sbjct:  174 FKESLRWGTEVYHSLKSVL 192          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_LEPCP (Enolase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=eno PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 4.086e-43
Identity = 97/187 (51.87%), Postives = 121/187 (64.71%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKKP*RW 648
            I  +  R++ DSRGNPTVE DV    G + RAAVPSGASTG  EA+ELRDG  S YLGKGV  AV N+N  I  A+ G D  EQ+ +D  ++  LDG  N     K +LGANA+LAVS+AV +A A    +PLY++     G   + LPVP  NVINGG+HA N L + E MI+PVGA SF++  RW
Sbjct:    4 IVDIVGREVLDSRGNPTVECDVLLESGVMGRAAVPSGASTGSREAIELRDGDKSRYLGKGVLNAVKNINTEISEAVLGLDAAEQSFLDKTLI-DLDGTDN-----KGRLGANAMLAVSMAVARAAAEESGLPLYRY---FGGMGAVQLPVPMMNVINGGAHANNSLDLQEMMIIPVGAPSFREAVRW 181          

HSP 2 Score: 25.7942 bits (55), Expect = 4.086e-43
Identity = 9/19 (47.37%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EA++ G EV+H LK ++
Sbjct:  175 FREAVRWGAEVFHALKKIL 193          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_SALRD (Enolase OS=Salinibacter ruber (strain DSM 13855) GN=eno PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43
Identity = 99/184 (53.80%), Postives = 120/184 (65.22%), Query Frame = 1
Query:   88 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            +I  V ARQI DSRG PTVEVDVTT +G + RAAVPSGASTG YEA+ELRDG +D Y G+GV +AV +VN  +  AL G    EQ AID+  ++ LDG  +     K  LGANAIL  SLA  KAGA    +PLY+H+   +      LPVP  N++NGG HA N + M EFMI P GA SF +
Sbjct:    3 SIQRVTARQILDSRGTPTVEVDVTTGEGVLGRAAVPSGASTGAYEAVELRDGDADRYHGQGVLRAVGHVNDAVADALHGMSVLEQVAIDD-TLRALDGTED-----KSNLGANAILGASLAAAKAGAATLGVPLYRHLGRATAR---TLPVPLMNILNGGEHADNNVDMQEFMIAPAGADSFSE 177          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_METMP (Enolase OS=Methanococcus maripaludis GN=eno PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43
Identity = 100/180 (55.56%), Postives = 114/180 (63.33%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSF 630
            I  +KARQ+ DSRGNPTVE +V T+ G      VPSGASTG +EA+ELRD    Y GK V  AVSNVN II   L G+D   Q  ID  M+  LDG  N     K  LGANAILAVSLAV KA A    +PLYK+I    G+   V+P P  NV+NGG HAGN L   EFMI+PVGA SF
Sbjct:    7 IYEIKARQVLDSRGNPTVEAEVLTAGGGYGHTIVPSGASTGTFEAVELRDKKEKYGGKSVLNAVSNVNDIIAQELIGEDARNQRLIDQIML-NLDGTEN-----KGNLGANAILAVSLAVAKAAADTASLPLYKYI---GGSNAYVMPAPMMNVLNGGQHAGNALDFQEFMIMPVGADSF 177          
BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_METM5 (Enolase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=eno PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43
Identity = 100/180 (55.56%), Postives = 113/180 (62.78%), Query Frame = 1
Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSF 630
            I  +KARQ+ DSRGNPTVE +V T+ G      VPSGASTG +EA+ELRD    Y GK V  AVSNVN II   L G+D   Q  ID  M+  LDG  N     K  LGANAILAVSLAV KA A    +PLYK+I    G    V+P P  NV+NGG HAGN L   EFMI+PVGA SF
Sbjct:    7 IYEIKARQVLDSRGNPTVEAEVLTAGGGYGHTIVPSGASTGTFEAVELRDATEKYGGKSVLNAVSNVNDIIAQELIGEDARNQRLIDQIMI-NLDGTEN-----KGNLGANAILAVSLAVAKAAADTASLPLYKYI---GGCNAYVMPAPMMNVLNGGQHAGNALDFQEFMIMPVGADSF 177          
The following BLAST results are available for this feature:
BLAST of FC869095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_GEOUR3.136e-4355.25Enolase OS=Geobacter uraniireducens (strain Rf4) G... [more]
ENO_HYPNA3.136e-4354.64Enolase OS=Hyphomonas neptunium (strain ATCC 15444... [more]
ENO_SYNFM3.136e-4353.04Enolase OS=Syntrophobacter fumaroxidans (strain DS... [more]
ENO_MYCGA3.600e-4352.94Enolase OS=Mycoplasma gallisepticum GN=eno PE=3 SV... [more]
ENO_SYNS94.086e-4350.54Enolase OS=Synechococcus sp. (strain CC9902) GN=en... [more]
ENO_MYCA94.086e-4351.91Enolase OS=Mycobacterium abscessus (strain ATCC 19... [more]
ENO_LEPCP4.086e-4351.87Enolase OS=Leptothrix cholodnii (strain ATCC 51168... [more]
ENO_SALRD4.702e-4353.80Enolase OS=Salinibacter ruber (strain DSM 13855) G... [more]
ENO_METMP4.702e-4355.56Enolase OS=Methanococcus maripaludis GN=eno PE=3 S... [more]
ENO_METM54.702e-4355.56Enolase OS=Methanococcus maripaludis (strain C5 / ... [more]

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Properties
Property NameValue
Genbank descriptionC31008E02EF AbioticL1 Citrus clementina cDNA clone C31008E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869095 ID=FC869095; Name=FC869095; organism=Citrus clementina; type=EST; length=685bp
GAATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCTAGAT
CTTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCG
TCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTC
GACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGG
TGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTG
ATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATC
ATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGA
CAACTATATGGTACAACAACTTGATGGAATTGTAAATGAGTGGGGTTGGT
GCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTC
TGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGC
CGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATG
TCATTAATGGTGGATCACATGCTGGGAACAAACTTGCTATGCANGAGTTT
ATGATTCTTCCTGTAGGAGCTTCCTCTTTCAAGAAGCCATGAAGATGGGT
GTAGAAGTATATCACCATCTGAAGGCTGTGATTAA
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