FC869097

Overview
NameFC869097
Unique NameFC869097
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length597
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC869097_ssr3 microsatellite FC869097_ssr3:3..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.154e-41
Identity = 76/161 (47.20%), Postives = 103/161 (63.98%), Query Frame = 2
Query:   74 LPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            LPGF+G  P +  +GYV + +      +YYF++SEKNP +DP++LWL GGPGCS+  G  YE GP NF + + N S P LHLNPYSW+K ++I+++DSPVG G+SY+        GD K       FL KW    PE  SNP +I G+SY+G+ VP L  +
Sbjct:   38 LPGFEGTFPSKHYSGYVTIDKEHGKNLWYYFIESEKNPSKDPVVLWLNGGPGCSSMDGFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNNKSDYITGDIKTAVDSHAFLLKWFQMFPEFQSNPFFISGESYAGVYVPTLASE 198          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 165.622 bits (418), Expect = 1.666e-40
Identity = 78/158 (49.37%), Postives = 100/158 (63.29%), Query Frame = 2
Query:   74 LPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPAL 547
            LPGF G LP +   GYV V E      FYY V+SE++P +DP++LWL GGPGCS+F G  YE GP NF       S P LHLNPY+W+K ++++++DSP G G SY+K     + GD K       FL KW   +PE LSNP YI G+SY+G+ VP L
Sbjct:   40 LPGFDGALPSKHYAGYVTVDEGHGRNLFYYVVESERDPGKDPVVLWLNGGPGCSSFDGFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVSDYETGDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTL 197          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.490e-36
Identity = 71/161 (44.10%), Postives = 96/161 (59.63%), Query Frame = 2
Query:   74 LPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            LPGF G  P +   GYV + +  +   +YYFV+SE+N   DP++LWL GGPGCS+  G  YE GP NF   + N     LHLNPYSW+K ++I+++DSPVG G+SY+         D K       FL +W    PE  SNP +I G+SY+G+ VP L  +
Sbjct:   33 LPGFNGTFPSKHYAGYVAIDKHRNKNLWYYFVESERNASVDPVVLWLNGGPGCSSMDGFVYEHGPFNFEPKKKNSH--LLHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTDDTKTASDTHTFLLEWFKMFPEFQSNPFFISGESYAGIYVPTLAAE 191          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 4.548e-30
Identity = 73/163 (44.79%), Postives = 93/163 (57.06%), Query Frame = 2
Query:   65 VKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPL-ASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPAL 547
            VK LPG Q P+ F    GYV V E+     FY+F ++ +NP + P+LLWL GGPGCS+   G A E+GP        N S P L LNPYSW K A++LF++SPVG G+SY  T     Q GD    +    FL  W    P+  S+  YI G+SY+G  VP L
Sbjct:   52 VKELPG-QPPVKFRQYAGYVTVNETHGRALFYWFFEATQNPSKKPVLLWLNGGPGCSSIGFGAAEELGPF----FPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFYIAGESYAGHYVPQL 209          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.013e-29
Identity = 74/170 (43.53%), Postives = 91/170 (53.53%), Query Frame = 2
Query:   47 QLE*STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPL-ASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQ 553
            Q E   ++ LPG Q  + F    GYV V ES     +YYFV++ K  +  PL+LWL GGPGCS+  G   E+GP         G   TL+ NPYSW   A+ILF++SPVGTG+SY  T       GD K       FL KWL   PE      YI G+SY+G  VP L Q
Sbjct:   74 QKERDLIENLPG-QPSVSFRQYGGYVTVNESAGRSLYYYFVEATKTKKSLPLVLWLNGGPGCSSLYGAFQELGPFRI-----YGDGKTLYTNPYSWNNVANILFLESPVGTGFSYTNTESDLENPGDMKAAADKYIFLVKWLERFPEYKGREFYIAGESYAGHYVPQLAQ 237          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.567e-29
Identity = 65/163 (39.88%), Postives = 91/163 (55.83%), Query Frame = 2
Query:   65 VKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQ 553
            ++ LPG    + F+   GYV V +      +YYFV++ K     PL++W  GGPGCS+  G   E+GP     V  +G   TL  NPYSW  EA++LF+++PVGTG+SY+ +P+  + GD    +    FL  WL   PE     +YI G SY+G  VP L Q
Sbjct:   64 IQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFNGGPGCSSLGGAFKELGPFR---VHSDGK--TLFRNPYSWNNEANVLFLETPVGTGFSYSNSPINGKQGDKATAEDNYMFLVNWLERFPEYKGRDIYIAGQSYAGHYVPQLAQ 221          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.256e-28
Identity = 73/177 (41.24%), Postives = 97/177 (54.80%), Query Frame = 2
Query:   26 YSFVCSLQLE*STVKFLPGFQGPLP-FELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQ 553
            +++VC   L    +  LPG   P+  F+  +GY  VG   +    Y+FV+S+ NP  DP+LLWLTGGPGCS  S L  E GP N N         TL  NPYSW K ASIL +++P G GYSYA T      GD +   +  + L  +  + P+   N  Y+ G+SY G+ VP LVQ
Sbjct:   15 FAYVCESAL----ITNLPG--APISNFKQYSGYYNVGTKKNHMLHYWFVESQSNPSTDPVLLWLTGGPGCSGLSALLTEWGPWNVNT-----DGATLRTNPYSWNKNASILTLEAPAGVGYSYA-TDNNIATGDDQTASENWEALVAFFNEFPQYKGNDFYVTGESYGGIYVPTLVQ 179          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.112e-27
Identity = 71/162 (43.83%), Postives = 93/162 (57.41%), Query Frame = 2
Query:   74 LPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQ-AGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQ 553
            LPG Q  + F    GYV V ES     FY+F ++   P+E PL+LWL GGPGCS+   G   EIGP    +V+ NG+   L+ NPY+W KEA++LF++SPVG G+SY+ T    Q  GD    +    FL  W    PE   N  YI G+SY+G  VP L +
Sbjct:   54 LPG-QPDVSFRHYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPF---LVDTNGN--GLNFNPYAWNKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFYIAGESYAGKYVPELAE 209          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.112e-27
Identity = 67/162 (41.36%), Postives = 89/162 (54.94%), Query Frame = 2
Query:   74 LPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPL-ASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQ 553
            +PG      F    GYV V E   A  FY+F ++  +P   PLLLWL GGPGCS+ + G+  E+GP +      N     +H+NPYSW + A+ILF+DSPVG GYSY+ T       GD +  +    FL KWL   P+      Y+ G+SY+G  VP L Q
Sbjct:    4 VPGQAFDASFAHYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFH-----VNADGKGVHMNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLAQ 160          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.369e-26
Identity = 69/162 (42.59%), Postives = 87/162 (53.70%), Query Frame = 2
Query:   47 QLE*STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPL-ASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSG 529
            Q E   ++ LPG Q  + F+   GYV V ES     +YYFV++       PL+LWL GGPGCS+  G   E+GP  F V   N    TL+ NPYSW   A++LF++SP GTG+SY  T       GD K       FL KWL   PE      YI G+SY+G
Sbjct:   74 QKERDLIENLPG-QPSVNFKQYGGYVTVNESAGRSLYYYFVEATNTKNSSPLVLWLNGGPGCSSLYGAFQELGP--FRVHSDN---KTLYTNPYSWNNVANMLFLESPAGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFYIAGESYAG 229          
The following BLAST results are available for this feature:
BLAST of FC869097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
SCP20_ARATH1.154e-4147.20Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
CBP1_HORVU1.666e-4049.37Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SCP21_ARATH2.490e-3644.10Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP34_ARATH4.548e-3044.79Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP39_ARATH1.013e-2943.53Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP36_ARATH6.567e-2939.88Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
YUA6_CAEEL4.256e-2841.24Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
SCP31_ARATH2.112e-2743.83Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
CBP22_HORVU2.112e-2741.36Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP53_ARATH1.369e-2642.59Putative serine carboxypeptidase-like 53 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC31008E04EF AbioticL1 Citrus clementina cDNA clone C31008E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869097 ID=FC869097; Name=FC869097; organism=Citrus clementina; type=EST; length=597bp
CCTCTTCTTCTTCTTCTTCTTCTTGTACAGCTTTGTTTGCAGCTTGCAGC
TGGAATAATCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCC
TTTGAACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACA
GCCCTTCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTC
TCTTGCTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTT
GCTTATGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAG
CCCCCCTACTTTGCACTTGAATCCCTACTCATGGACAAAGGAAGCCAGCA
TATTATTTGTGGATTCGCCTGTTGGCACTGGATATTCCTACGCAAAAACC
CCACTTGCCTCTCAAGCCGGTGACTTCAAACAAGTTCAGCAGGTTGACCA
ATTTCTTCGAAAGTGGCTATTGGATCACCCTGAGCTCCTCTCAAATCCAG
TCTACATTGGAGGGGATTCATACTCTGGCCTCGTTGTCCCAGCACTTGTG
CAACAGATCTNCAATGAAAATGAAGAGGATATCAACCACTAATAAAT
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