FC869097

Overview
NameFC869097
Unique NameFC869097
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length597
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC869097_ssr3 microsatellite FC869097_ssr3:3..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: CBPX_ORYSJ (Serine carboxypeptidase-like OS=Oryza sativa subsp. japonica GN=CBP31 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 7.775e-22
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 2
Query:  116 GYVGVGESGDAQPFYYFVKSEKNPRED-PLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            GY  +  + DA+ FY+F +S  +  ED P+++WLTGGPGCS+   L YE GP +           +L  N + W +E+++++VD P GTG+SY+  P  ++  +      +  FL+ +  +HP    N  YI G+SY+G  +PA   +
Sbjct:   19 GYYRLPNTHDARLFYFFFESRGSKGEDDPVVIWLTGGPGCSSELALFYENGPFHI------ADNMSLVWNDFGWDQESNLIYVDQPTGTGFSYSSNPRDTRHDEAGVSNDLYAFLQAFFTEHPNFAKNDFYITGESYAGHYIPAFASR 160          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.326e-21
Identity = 62/162 (38.27%), Postives = 84/162 (51.85%), Query Frame = 2
Query:   74 LPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSE--KNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPL-ASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPAL 547
            LPG    + F   +GYV V E      FY+ V+S   ++P+  PL+LWL GGPGCS+ + G A EIGP             TLH   Y+W K A++LF++SP G G+SY+ T       GD +  +    FL  W    P+      YI G+SY+G  VP L
Sbjct:   37 LPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRVG-----SDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQL 193          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: YBY9_YEAST (Putative serine carboxypeptidase YBR139W OS=Saccharomyces cerevisiae GN=YBR139W PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.262e-21
Identity = 51/136 (37.50%), Postives = 78/136 (57.35%), Query Frame = 2
Query:  155 FYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQ--AGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            FY+F +S  +P  DP++LWL GGPGCS+F+GL +E+GP +            +H NPYSW   AS++F++ P+G G+SY    ++S   AG    +     FL  +    P L SN  +I G+SY+G  +P +  +
Sbjct:  107 FYWFFESRNDPANDPIILWLNGGPGCSSFTGLLFELGPSSI-----GADMKPIH-NPYSWNNNASMIFLEQPLGVGFSYGDEKVSSTKLAGKDAYI-----FLELFFEAFPHLRSNDFHIAGESYAGHYIPQIAHE 231          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 52/147 (35.37%), Postives = 82/147 (55.78%), Query Frame = 2
Query:  116 GYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            GY  + +S  A  FY+F +S +N ++ P+++WLTGGPGCS+   + YE GP          S  +L  N Y W + +++L+VD PVGTG+SY       +  +      +  FL+ +  +HP+L  N  YI G+SY+G  +PA   +
Sbjct:  102 GYYKLPKSRGASMFYFFFES-RNKKDAPVVIWLTGGPGCSSELAVFYENGPFKIT------SNMSLAWNEYGWDQVSNLLYVDQPVGTGFSYTTDKSDIRHDETGVSNDLYDFLQAFFAEHPKLAKNDFYITGESYAGHYIPAFASR 241          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.955e-21
Identity = 54/159 (33.96%), Postives = 92/159 (57.86%), Query Frame = 2
Query:   74 LPGFQGPLPFELETGYVGVGESGDAQPFYY-FVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPAL 547
            LPG      F   +GY+    + D++ F+Y FV+S+ +P+  P++LWL GGPGCS+  GL  E GP    +++ +G   TL  NPY+W   A++L+++SP G G+SY+   +     D +  +   + L+ +    PE   N +++ G+SY+G+ +P L
Sbjct:   33 LPGLAKQPSFRQYSGYL---RASDSKHFHYWFVESQNDPKNSPVVLWLNGGPGCSSLDGLLTEHGPF---LIQPDG--VTLEYNPYAWNLIANVLYIESPAGVGFSYSDDKM-YVTNDTEVAENNYEALKDFFRLFPEYKDNKLFLTGESYAGIYIPTL 182          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.582e-21
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  113 TGYVGVGESGDAQPFYYFVKS-EKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPL-ASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQ 553
            +GYV V +      F++F ++  ++P   PL+LWL GGPGCS+   G A E+GP  F VVE NG+  +L  N YSW +EA++LF++SPVG G+SY  +        D    +    F+  W   +P+  S   +I G+SY+G   P L +
Sbjct:   49 SGYVNVNQENTRSLFFWFFEALSESPSTRPLVLWLNGGPGCSSIGYGAASELGP--FRVVE-NGT--SLSFNQYSWVQEANMLFLESPVGVGFSYTNSSSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFFIAGESYAGHYSPQLAE 193          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.582e-21
Identity = 61/162 (37.65%), Postives = 86/162 (53.09%), Query Frame = 2
Query:   74 LPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPL-ASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQ 553
            LPG Q  + F++ +GY+ V E      FY   ++ ++ +  PL+LWL GGPGCS+ + G + E+G      V+  G+   L LN Y W K A++LF+DSP G G+SY  T      +GD +       FL KW    P       YI G+SY+G  VP L Q
Sbjct:   14 LPG-QPAVDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFR---VKPRGA--GLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQ 169          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.596e-21
Identity = 63/171 (36.84%), Postives = 86/171 (50.29%), Query Frame = 2
Query:   47 QLE*STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEK-NPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQ 553
            Q E   +  LPG    + F +  GYV + ++     +Y+F +++  +P   PL+LWL GGPGCS+   G   E+GP     V  NG   +L LN Y+W K A+ILF +SP G  +SY+ T      GD K  Q    FL KW    P       YI G+  SG  +P L Q
Sbjct:   59 QQEDDRIPGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFR---VHTNGE--SLLLNEYAWNKAANILFAESPAGVVFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGE--SGHFIPQLSQ 222          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.123e-20
Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 2
Query:   47 QLE*STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFS-GLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYA-KTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            + E   +  LPG Q  + FE  +GYV V +      FY+  ++   P   PL++WL GGPGCS+ + G + EIGP     +   GS   L+LN ++W   +++LF+++P G G+SY  ++      GD +  +   QFL +WL   P      +YI G+SY+G  VP L ++
Sbjct:   32 EAEADRITSLPG-QPNVTFEQFSGYVTVDKLSGRSLFYWLTEASDLPLSKPLVIWLNGGPGCSSVAYGASEEIGPFR---ISKGGS--GLYLNKFAWNSISNLLFLEAPAGVGFSYTNRSSDLFNTGDRRTAKDSLQFLIQWLHRFPRYNHREIYITGESYAGHYVPQLAKE 197          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: CBP3_WHEAT (Serine carboxypeptidase 3 OS=Triticum aestivum GN=CBP3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.915e-20
Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 2
Query:   74 LPGF-QGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            LPG  +G        GY  +  + DA+ FY+F +S +  +EDP+++WLTGGPGCS+   + YE GP          +  +L  N + W K ++I+FVD   GTG+SY+     ++  +      +  FL+ +   HPE + N  +I G+SY+G  +PA   +
Sbjct:   74 LPGLPEGVGDLGHHAGYYRLPNTHDARMFYFFFES-RGKKEDPVVIWLTGGPGCSSELAVFYENGPFTI------ANNMSLVWNKFGWDKISNIIFVDPATGTGFSYSSDDRDTRHDEAGVSNDLYDFLQVFFKKHPEFVKNDFFITGESYAGHYIPAFASR 228          
The following BLAST results are available for this feature:
BLAST of FC869097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
CBPX_ORYSJ7.775e-2234.46Serine carboxypeptidase-like OS=Oryza sativa subsp... [more]
SCP27_ARATH1.326e-2138.27Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
YBY9_YEAST2.262e-2137.50Putative serine carboxypeptidase YBR139W OS=Saccha... [more]
SCP49_ARATH2.955e-2135.37Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
PPGB_MOUSE2.955e-2133.96Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
SCP33_ARATH6.582e-2138.00Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
CBP2_WHEAT6.582e-2137.65Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
HNLS_SORBI8.596e-2136.84P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP25_ARATH1.123e-2034.30Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
CBP3_WHEAT1.915e-2033.33Serine carboxypeptidase 3 OS=Triticum aestivum GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31008E04EF AbioticL1 Citrus clementina cDNA clone C31008E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869097 ID=FC869097; Name=FC869097; organism=Citrus clementina; type=EST; length=597bp
CCTCTTCTTCTTCTTCTTCTTCTTGTACAGCTTTGTTTGCAGCTTGCAGC
TGGAATAATCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCC
TTTGAACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACA
GCCCTTCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTC
TCTTGCTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTT
GCTTATGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAG
CCCCCCTACTTTGCACTTGAATCCCTACTCATGGACAAAGGAAGCCAGCA
TATTATTTGTGGATTCGCCTGTTGGCACTGGATATTCCTACGCAAAAACC
CCACTTGCCTCTCAAGCCGGTGACTTCAAACAAGTTCAGCAGGTTGACCA
ATTTCTTCGAAAGTGGCTATTGGATCACCCTGAGCTCCTCTCAAATCCAG
TCTACATTGGAGGGGATTCATACTCTGGCCTCGTTGTCCCAGCACTTGTG
CAACAGATCTNCAATGAAAATGAAGAGGATATCAACCACTAATAAAT
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