FC869102

Overview
NameFC869102
Unique NameFC869102
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length610
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 52/165 (31.52%), Postives = 82/165 (49.70%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S++  R R+L+++S + + TT+    + MP+ +AP     M    GE          G   TLS+ +   +EEV+ T     +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLPMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSM (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLU (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLI (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12) GN=lldD PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLC (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECOHS (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O9:H4 (strain HS) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECODH (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12 / DH10B) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECOBW (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12 / BW2952) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
[Close]
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: LLDD_ECO8A (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O8 (strain IAI1) GN=lldD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 1 
Query:   94 ITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREAD 588
            I+   +Y A A+  LP  ++ Y   GA  ++TL+ N    S +  R RIL+++S + + TT+    +SMP+ +AP     M    GE          G   TLS+ +   +EEV+       +FQLYV +DR      ++RA+ AG   +  TVD P  G R  D
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRD 167
The following BLAST results are available for this feature:
BLAST of FC869102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_SALCH2.476e-1831.52L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_ECOSM2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOSE2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLU2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLI2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLC2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOHS2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECODH2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOBW2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO8A2.476e-1832.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionC31008E09EF AbioticL1 Citrus clementina cDNA clone C31008E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869102 ID=FC869102; Name=FC869102; organism=Citrus clementina; type=EST; length=610bp
CTTTATTGCTTTGCGCTCCCTTCACTGATTCATTTCTGCTTCCCTTGTTG
TTCAAGGAAGCCAAGCGATAGCATTATGACTTATATATCGGAGATCACCA
ATGTTATGGAGTATGAGGCTCTTGCAAAGGAGAAATTGCCGAAGATGGTT
TATGACTACTATGCATCAGGTGCTGAGGACCAGTGGACTCTTCAGGAAAA
CCGTAATGCATTCTCTAGGATTCTATTTCGACCACGCATTCTTAGAGATG
TAAGCAAGATTGACATGACTACAACAGTCTTGGGCTTCAACATTTCCATG
CCCATCATGATTGCTCCAACGGCATTTCAGAAAATGGCTCATCCTGAAGG
GGAGTGTGCAACAGCAAGGGCAGCCTCAGCAGCTGGCACAATCATGACAT
TATCTTCATGGGCCACTTCCAGTGTCGAGGAAGTTTCTTCAACGGGACCT
GGAATTCGCTTTTTCCAACTCTATGTGACCAAGGACAGGAATGTGGACGC
ACAGCTAGTAAAAAGAGCTGAAAGGGCTGGTTTTAAGGCGATTGCCCTTA
CCGTCGATACTCCAAGGCTTGGCCGTCGGGAAGCTGATATTAAGAACAGA
TTTGTTTTGC
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