FC869109

Overview
NameFC869109
Unique NameFC869109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.946e-79
Identity = 148/237 (62.45%), Postives = 172/237 (72.57%), Query Frame = 1
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E +YV +   EI   V++QE L +DVLVHGE ERN+MVEYF EQL G+ FT  GWVQSYGSRCVKP +IYGD+SRP+AMTV W   AQ +T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE A I I+QIDEAA REGLPLR+S    YL+WA  +FR+   G++D TQIHTHMCYS FND+I SI  MDADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  466 EADYVEAMHSEIRHAVQIQENLGLDVLVHGEAERNDMVEYFAEQLDGYVFTRFGWVQSYGSRCVKPAVIYGDLSRPEAMTVAWIRYAQGLTRKVMKGMLTGPVTMLMWSFPREDVSRETQARQLALAIRDEVLDLEAADIKIVQIDEAAFREGLPLRRSAWPAYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EKFDYPNEIGPG 701          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.946e-79
Identity = 149/235 (63.40%), Postives = 171/235 (72.77%), Query Frame = 1
Query:    7 EYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            EY  +   EI   V++QE L +DVLVHGE ERN+MVEYF EQL G+AFT  GWVQSYGSRCVKP +I GD+ RP+AMTV W   AQ +T +PMKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI IIQIDEAA REGLPLR++    YLDWA  +FR+   G++D TQIHTHMCYS FND+I SI  MDADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  468 EYTEAMHAEIRHAVEVQENLGLDVLVHGEAERNDMVEYFAEQLDGYAFTRFGWVQSYGSRCVKPAVIVGDLGRPQAMTVEWIKYAQGLTDKPMKGMLTGPVTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIIQIDEAAFREGLPLRQAAWQGYLDWATEAFRLAASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-ERFAYPNEIGPG 701          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_PHOLL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=metE PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.946e-79
Identity = 148/234 (63.25%), Postives = 173/234 (73.93%), Query Frame = 1
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y  +  E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPP+I GDVSRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV+DL++AGI IIQIDE ALREGLPLR+ E   YLDWAV +F++     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  460 YRTNICEHIKQAINEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPVIIGDVSRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVDDLQEAGIGIIQIDEPALREGLPLRREEWQSYLDWAVEAFKLNAAIAKDDTQIHTHMCYCEFNDIMPSIAALDADVITIETSRSDMELLDSF-ENFSYPNEIGPG 692          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_MYCLE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium leprae GN=metE PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.946e-79
Identity = 142/237 (59.92%), Postives = 182/237 (76.79%), Query Frame = 1
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E EY++  K+E+   +KLQE+L +DVLVHGEPERN+MV+YF EQL GF  T NGWVQSYGSRCV+PPI+YGDVSRP  MT+ W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI IIQ+DE ALRE LPLR+++   YL WAV +FR+   G+ D+TQIHTH+CYS F ++I +I D+DADV +IE +RS+  +L      V +  +IGPG
Sbjct:  460 EAEYISRMKKEVADAIKLQEQLGLDVLVHGEPERNDMVQYFAEQLGGFFATQNGWVQSYGSRCVRPPILYGDVSRPHPMTIEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAIIQVDEPALRELLPLRRADQDEYLCWAVKAFRLATSGVADSTQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAVGFANSIGPG 695          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_SODGM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Sodalis glossinidius (strain morsitans) GN=metE PE=3 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.320e-79
Identity = 148/234 (63.25%), Postives = 171/234 (73.08%), Query Frame = 1
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPII GD+SRP+A+T+ W+  AQS+TA+P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE+AGI +IQIDE ALREGLPL+ S    YL WAV +FR+     QD TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F+E   Y   IGPG
Sbjct:  460 YRTGISEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIIIGDISRPEAITIEWARYAQSLTAKPVKGMLTGPVTILCWSFPREDVSRKTIARQIALALRDEVADLEQAGIGVIQIDEPALREGLPLKHSAWQDYLTWAVEAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLETFKE-FDYPNEIGPG 692          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_BUCCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Cinara cedri GN=metE PE=3 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.336e-79
Identity = 146/235 (62.13%), Postives = 176/235 (74.89%), Query Frame = 1
Query:    7 EYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            +Y    K  I + +  QE+L +DVLVHGEPERN+MVEYF E L GF FT  GWVQSYGSRCVKPPII GD+SR   MTV WS  AQS+T +P+K MLTGPVTIL WSF R D  + + C QIA++++DEV DLE +GINIIQIDE ALREGLPLR  E   YL WAV SF+I + G++++TQIHTHMCY  FNDI+ +I+D+DADVITIE SRS+  LL  F+   +Y  AIGPG
Sbjct:  459 DYEKQIKIHIKKNIIQQEQLGLDVLVHGEPERNDMVEYFSEYLEGFVFTTYGWVQSYGSRCVKPPIIVGDISRITPMTVMWSKYAQSLTKKPVKAMLTGPVTILCWSFPREDISKEDICNQIAISLRDEVLDLENSGINIIQIDEPALREGLPLRTHEWNNYLRWAVKSFKICSSGVKNSTQIHTHMCYCEFNDIMPAIVDLDADVITIETSRSDMELLEFFKT-FKYPNAIGPG 692          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_SCHPO (Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Schizosaccharomyces pombe GN=SPAC9.09 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.663e-79
Identity = 144/237 (60.76%), Postives = 180/237 (75.95%), Query Frame = 1
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            +EEY A  ++EI+ VVK QEE+ +DVLVHGEPERN+MV+YFGE++ GF FT NGWVQSYGSRCV+PPII GDV RP  MTV  S  AQS+T++PMKGMLT P+TIL WSF R+D        QIAL ++DEV DLEKAGI +IQ DE ALREGLPLR++E   YL WA+ +FR+    +QD TQIH+H CYS+FNDI  +I  +DADV++IENS+S+  LL+V     +Y + IGPG
Sbjct:  465 QEEYDAFIRKEISDVVKFQEEVGLDVLVHGEPERNDMVQYFGERMEGFVFTVNGWVQSYGSRCVRPPIIVGDVYRPAPMTVKESQYAQSITSKPMKGMLTAPITILRWSFPRDDVHDSVQAQQIALGLRDEVLDLEKAGIKVIQCDEPALREGLPLRRAEWDEYLKWAIDAFRLATAAVQDDTQIHSHFCYSDFNDIFDAIQRLDADVVSIENSKSDMKLLNVLS---RYTSCIGPG 698          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ERWCT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia carotovora subsp. atroseptica GN=metE PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.397e-79
Identity = 150/234 (64.10%), Postives = 170/234 (72.65%), Query Frame = 1
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + V  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPP+I GDVSRP+A+TV W+  AQS+T +PMKGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPL +S+   YL WAV +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E  +Y   IGPG
Sbjct:  457 YRTGIAEHIKQAVAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPVIIGDVSRPEAITVEWAKYAQSLTDKPMKGMLTGPVTILCWSFPREDVTRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLHRSDWDAYLAWAVDAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FEYPNEIGPG 689          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 9.660e-79
Identity = 147/234 (62.82%), Postives = 171/234 (73.08%), Query Frame = 1
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPP++ GDVSRP+A+TV W+  AQS+TA+P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPL++S+   YL W V +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E  +Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFIFTQNGWVQSYGSRCVKPPVVIGDVSRPQAITVDWAKYAQSLTAKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLKRSDWDAYLQWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF-EAFEYPNEIGPG 689          
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_BUCAP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metE PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.648e-78
Identity = 149/235 (63.40%), Postives = 176/235 (74.89%), Query Frame = 1
Query:    7 EYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            +Y    K+ I  V+K QE+L IDVLVHGEPERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPII GDVSR K +TV WS  AQS+T +P+K MLTGPVTIL WSF R D    +   QI LA++DEV DLEK  I IIQIDE ALREGLPLRKS    YL WAV +FR+++ G+++TTQIHTHMCY  F+DI+H+I  +DADVITIE +RS+  LL  F+   +Y   IGPG
Sbjct:  455 DYEIGIKKHIKEVIKEQEKLGIDVLVHGEPERNDMVEYFGENLDGFIFTDNGWVQSYGSRCVKPPIIIGDVSRLKPITVKWSKYAQSLTDKPVKAMLTGPVTILFWSFPREDISLEKIAKQIGLALRDEVLDLEKEKIEIIQIDEPALREGLPLRKSLWNEYLSWAVDAFRLSSSGVKNTTQIHTHMCYCEFHDIMHAISFLDADVITIETARSDMELLKSFKT-FKYPNEIGPG 688          
The following BLAST results are available for this feature:
BLAST of FC869109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
METE_PSEPW1.946e-7962.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY1.946e-7963.405-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOLL1.946e-7963.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCLE1.946e-7959.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SODGM3.320e-7963.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCCC4.336e-7962.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SCHPO5.663e-7960.76Probable 5-methyltetrahydropteroyltriglutamate--ho... [more]
METE_ERWCT7.397e-7964.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP79.660e-7962.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCAP1.648e-7863.405-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31008F04EF AbioticL1 Citrus clementina cDNA clone C31008F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869109 ID=FC869109; Name=FC869109; organism=Citrus clementina; type=EST; length=713bp
GAGGAAGAATATGTTGCTTCCTTCAAGGAGGAAATCAACAGGGTTGTCAA
ACTCCAAGAAGAGCTTGATATTGATGTTCTTGTCCATGGAGAGCCTGAGA
GGAACAACATGGTTGAGTACTTTGGAGAGCAATTATCAGGTTTCGCCTTC
ACTGCCAATGGGTGGGTGCAATCCTATGGATCTCGCTGTGTGAAGCCGCC
CATCATCTATGGTGATGTGAGCCGTCCCAAGGCTATGACCGTCTTCTGGT
CCTCCTTGGCTCAGAGCATGACTGCTCGCCCAATGAAGGGAATGCTTACT
GGCCCTGTCACCATTCTCAACTGGTCCTTTGTCAGAAATGACCAGCCCAG
ACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCGAGG
ATCTTGAGAAGGCAGGCATTAACATTATTCAAATTGATGAGGCTGCCTTG
AGGGAAGGATTGCCTCTCAGGAAATCTGAGCATGCTTTCTACTTGGACTG
GGCAGTCCACTCCTTCAGAATCACCAACTGCGGCATCCAGGACACTACCC
AGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCA
ATTATTGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCTAA
TGAGAATCTCCTGTCAGTCTTCCGTGAGGGAGTCCAGTATGATGCTGCAA
TTGGCCCTGGCGT
back to top