FC869109

Overview
NameFC869109
Unique NameFC869109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ECOSE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain SE11) GN=metE PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.178e-78
Identity = 148/234 (63.25%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ECOLU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.178e-78
Identity = 148/234 (63.25%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ECOLC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=metE PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.178e-78
Identity = 148/234 (63.25%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ECOL6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6 GN=metE PE=3 SV=3)

HSP 1 Score: 290.041 bits (741), Expect = 8.178e-78
Identity = 148/234 (63.25%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ECOL5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.178e-78
Identity = 148/234 (63.25%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ECOK1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O1:K1 / APEC GN=metE PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.178e-78
Identity = 148/234 (63.25%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ECO7I (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.178e-78
Identity = 148/234 (63.25%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ECO45 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=metE PE=3 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.178e-78
Identity = 148/234 (63.25%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_SHIFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella flexneri GN=metE PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.068e-77
Identity = 147/234 (62.82%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GD+SRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_SHIF8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=metE PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.068e-77
Identity = 147/234 (62.82%), Postives = 167/234 (71.37%), Query Frame = 1 
Query:   10 YVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            Y     E I + +  QE L +DVLVHGE ERN+MVEYFGE L GF FT NGWVQSYGSRCVKPPI+ GD+SRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI IIQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  457 YRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPG 689
The following BLAST results are available for this feature:
BLAST of FC869109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
METE_ECOSE8.178e-7863.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLU8.178e-7863.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOLC8.178e-7863.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL68.178e-7863.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOL58.178e-7863.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECOK18.178e-7863.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO7I8.178e-7863.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ECO458.178e-7863.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIFL1.068e-7762.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIF81.068e-7762.825-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC31008F04EF AbioticL1 Citrus clementina cDNA clone C31008F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869109 ID=FC869109; Name=FC869109; organism=Citrus clementina; type=EST; length=713bp
GAGGAAGAATATGTTGCTTCCTTCAAGGAGGAAATCAACAGGGTTGTCAA
ACTCCAAGAAGAGCTTGATATTGATGTTCTTGTCCATGGAGAGCCTGAGA
GGAACAACATGGTTGAGTACTTTGGAGAGCAATTATCAGGTTTCGCCTTC
ACTGCCAATGGGTGGGTGCAATCCTATGGATCTCGCTGTGTGAAGCCGCC
CATCATCTATGGTGATGTGAGCCGTCCCAAGGCTATGACCGTCTTCTGGT
CCTCCTTGGCTCAGAGCATGACTGCTCGCCCAATGAAGGGAATGCTTACT
GGCCCTGTCACCATTCTCAACTGGTCCTTTGTCAGAAATGACCAGCCCAG
ACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCGAGG
ATCTTGAGAAGGCAGGCATTAACATTATTCAAATTGATGAGGCTGCCTTG
AGGGAAGGATTGCCTCTCAGGAAATCTGAGCATGCTTTCTACTTGGACTG
GGCAGTCCACTCCTTCAGAATCACCAACTGCGGCATCCAGGACACTACCC
AGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCA
ATTATTGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCTAA
TGAGAATCTCCTGTCAGTCTTCCGTGAGGGAGTCCAGTATGATGCTGCAA
TTGGCCCTGGCGT
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