FC869109

Overview
NameFC869109
Unique NameFC869109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_PYRFU (Probable methylcobalamin:homocysteine methyltransferase OS=Pyrococcus furiosus GN=metE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 53/198 (26.77%), Postives = 89/198 (44.95%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAF--TANGWVQSYGSRCVKPPIIYGDVSRPKAMTVF-WSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFN 585
            EE++  + ++    V++  E   ID+   GE  R+ M EYF  ++ GF F      W  +Y ++      +  +   P  +  F W  + ++ T   +K  +TGP TI  WSF      +      +A  I  E++ LEK G   +Q+DE A+          H   +  AV +      GI+   ++  H+CYSN+N
Sbjct:   34 EEDFKEAVRDASISVLREHERAGIDIPWDGEMGRSEMTEYFTSKIKGFKFYGPVRVWGNAYFNKAAAVDKL--EYEEPLVLDEFLW--VKENTTREIVKIPITGPYTIAEWSFNEYYPDKESFVMDLAEIINKELKVLEKHGAKFVQLDEPAM--------LNHPSEVPLAVDAINRAVKGIK--MKVGLHVCYSNYN 217
The following BLAST results are available for this feature:
BLAST of FC869109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
METE_PYRFU3.870e-1126.77Probable methylcobalamin:homocysteine methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionC31008F04EF AbioticL1 Citrus clementina cDNA clone C31008F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869109 ID=FC869109; Name=FC869109; organism=Citrus clementina; type=EST; length=713bp
GAGGAAGAATATGTTGCTTCCTTCAAGGAGGAAATCAACAGGGTTGTCAA
ACTCCAAGAAGAGCTTGATATTGATGTTCTTGTCCATGGAGAGCCTGAGA
GGAACAACATGGTTGAGTACTTTGGAGAGCAATTATCAGGTTTCGCCTTC
ACTGCCAATGGGTGGGTGCAATCCTATGGATCTCGCTGTGTGAAGCCGCC
CATCATCTATGGTGATGTGAGCCGTCCCAAGGCTATGACCGTCTTCTGGT
CCTCCTTGGCTCAGAGCATGACTGCTCGCCCAATGAAGGGAATGCTTACT
GGCCCTGTCACCATTCTCAACTGGTCCTTTGTCAGAAATGACCAGCCCAG
ACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCGAGG
ATCTTGAGAAGGCAGGCATTAACATTATTCAAATTGATGAGGCTGCCTTG
AGGGAAGGATTGCCTCTCAGGAAATCTGAGCATGCTTTCTACTTGGACTG
GGCAGTCCACTCCTTCAGAATCACCAACTGCGGCATCCAGGACACTACCC
AGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCA
ATTATTGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCTAA
TGAGAATCTCCTGTCAGTCTTCCGTGAGGGAGTCCAGTATGATGCTGCAA
TTGGCCCTGGCGT
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