FC869109

Overview
NameFC869109
Unique NameFC869109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_PSEAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metE PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.903e-81
Identity = 149/237 (62.87%), Postives = 175/237 (73.84%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E EY+ +   EI   V++QE+L +DVLVHGE ERN+MVEYF EQL G+ FT  GWVQSYGSRCVKP +IYGD+SRP+AMTV W   AQS+T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI I+QIDEAA REGLPLR++    YL+WA  +FR+   G++D TQIHTHMCYS FND+I SI  MDADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  463 EAEYIEAMHSEIRHAVQIQEQLGLDVLVHGEAERNDMVEYFAEQLDGYVFTRFGWVQSYGSRCVKPAVIYGDLSRPRAMTVEWIRYAQSLTDKVMKGMLTGPVTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EQFDYPNEIGPG 698
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.903e-81
Identity = 149/237 (62.87%), Postives = 175/237 (73.84%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E EY+ +   EI   V++QE+L +DVLVHGE ERN+MVEYF EQL G+ FT  GWVQSYGSRCVKP +IYGD+SRP+AMTV W   AQS+T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI I+QIDEAA REGLPLR++    YL+WA  +FR+   G++D TQIHTHMCYS FND+I SI  MDADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  463 EAEYIEAMHSEIRHAVQIQEQLGLDVLVHGEAERNDMVEYFAEQLDGYVFTRFGWVQSYGSRCVKPAVIYGDLSRPRAMTVEWIRYAQSLTDKVMKGMLTGPVTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EQFDYPNEIGPG 698
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_DESVM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metE PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.903e-81
Identity = 148/237 (62.45%), Postives = 181/237 (76.37%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E +Y A+ +E I   ++ QE L +DVLVHGEPERN+MVEYFGEQL GF  TANGWVQSYG+RCVKPP++YGDV+RP  MTV W + AQS+T +P+KGMLTGPVTI  WSFVR+D PR     Q+ALAI+DEV DLE AGI +IQIDE ALREGLPLR++ HA YLD AV +FR+ + G++D TQIHTHMCY +F+DII  +  +DADVI++E SRS   LL VF     Y   +GPG
Sbjct:  480 EAQYDAAMREAIATAIREQEALGLDVLVHGEPERNDMVEYFGEQLRGFCITANGWVQSYGTRCVKPPLLYGDVARPGPMTVRWITHAQSLTQKPVKGMLTGPVTIACWSFVRDDVPRPVVFRQLALAIRDEVADLEAAGIGVIQIDEPALREGLPLRRAAHAAYLDAAVGAFRLASSGVRDATQIHTHMCYCDFHDIIDHVAALDADVISLEASRSRMELLDVFATHA-YPNEVGPG 715
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.348e-80
Identity = 147/237 (62.03%), Postives = 175/237 (73.84%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            + EY  +   EI   V++QE L +DVLVHGE ERN+MVEYF EQL G+AFT  GWVQSYGSRCVKP +IYGD+SRP+ MTV W   AQS+T + MKGMLTGPVT+L WSF R D  R     Q+ALA++DEV DLE+AGI I+QIDEAA REGLPLR+++   YL+WA  +FR+   G++D TQIHTHMCYS FND+I SI  MDADVITIE SRS+  LL  F E   Y   IGPG
Sbjct:  461 QAEYTEAMHSEIRHAVQVQERLGLDVLVHGEAERNDMVEYFAEQLDGYAFTRFGWVQSYGSRCVKPAVIYGDLSRPRPMTVEWIRYAQSLTGKVMKGMLTGPVTMLMWSFPREDVSREVQARQLALALRDEVSDLEQAGIRIVQIDEAAFREGLPLRRADWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EAFAYPNEIGPG 696
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.348e-80
Identity = 143/237 (60.34%), Postives = 182/237 (76.79%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E EYV   ++EI  V+ LQE L +DVLVHGEPERN+MV+YF EQL+GF  T NGWVQSYGSRCV+PPI+YGDVSRP+AMTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI +IQ+DE ALRE LPLR+++ A YL WAV +FR+   G+ D TQIHTH+CYS F ++I +I D+DADV +IE +RS+  +L      + +   +GPG
Sbjct:  460 EAEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGFFATQNGWVQSYGSRCVRPPILYGDVSRPRAMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAIGFANGVGPG 695
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.348e-80
Identity = 143/237 (60.34%), Postives = 182/237 (76.79%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E EYV   ++EI  V+ LQE L +DVLVHGEPERN+MV+YF EQL+GF  T NGWVQSYGSRCV+PPI+YGDVSRP+AMTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI +IQ+DE ALRE LPLR+++ A YL WAV +FR+   G+ D TQIHTH+CYS F ++I +I D+DADV +IE +RS+  +L      + +   +GPG
Sbjct:  460 EAEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGFFATQNGWVQSYGSRCVRPPILYGDVSRPRAMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAIGFANGVGPG 695
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.348e-80
Identity = 143/237 (60.34%), Postives = 182/237 (76.79%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E EYV   ++EI  V+ LQE L +DVLVHGEPERN+MV+YF EQL+GF  T NGWVQSYGSRCV+PPI+YGDVSRP+AMTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI +IQ+DE ALRE LPLR+++ A YL WAV +FR+   G+ D TQIHTH+CYS F ++I +I D+DADV +IE +RS+  +L      + +   +GPG
Sbjct:  460 EAEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGFFATQNGWVQSYGSRCVRPPILYGDVSRPRAMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAIGFANGVGPG 695
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.348e-80
Identity = 143/237 (60.34%), Postives = 182/237 (76.79%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E EYV   ++EI  V+ LQE L +DVLVHGEPERN+MV+YF EQL+GF  T NGWVQSYGSRCV+PPI+YGDVSRP+AMTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI +IQ+DE ALRE LPLR+++ A YL WAV +FR+   G+ D TQIHTH+CYS F ++I +I D+DADV +IE +RS+  +L      + +   +GPG
Sbjct:  460 EAEYVRRMRQEITEVIALQERLGLDVLVHGEPERNDMVQYFAEQLAGFFATQNGWVQSYGSRCVRPPILYGDVSRPRAMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAIGFANGVGPG 695
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.348e-80
Identity = 137/237 (57.81%), Postives = 183/237 (77.22%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E+ Y    ++ I ++++ QE+LD+D+LVHGEPERN+MVEYFGE L GF  + +GW+QSYGSRC+KPPII GD+SRP  +T+ W + AQS+T +P+KG+LTGP+TI+ WSF R D PRH    Q+ALAI+DEV DLEK+GI +IQIDE ALREGLPL+KSE ++YL WA+++F+IT   ++D TQIHTHMCYS FN+II  I+ +D DVI+IE+SRS+  LL   +   +    IGPG
Sbjct:  464 EDYYYTHIQQYIKKIIQEQEKLDLDILVHGEPERNDMVEYFGENLKGFVSSQHGWIQSYGSRCIKPPIIIGDISRPIPITIPWINYAQSLTNKPVKGILTGPITIMTWSFAREDIPRHMIALQLALAIRDEVMDLEKSGIGVIQIDEPALREGLPLKKSEQSYYLKWAINTFKITVSSVKDNTQIHTHMCYSEFNEIIDDILKLDVDVISIESSRSDLQLLQFIKTAGKKLNEIGPG 700
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.761e-80
Identity = 150/235 (63.83%), Postives = 171/235 (72.77%), Query Frame = 1 
Query:    7 EYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            +Y  + + EI   V +QE++ +DVLVHGE ERN+MVEYF EQL G+ FT  GWVQSYGSRCVKP IIYGD+SRP+ MTV W   AQ  T R MKGMLTGPVT+L WSF R D PR     Q+ALAI+DEV DLE AGI IIQIDEAA REGLPLR+ +   YLDWAV +FR+   G++D TQIHTHMCYS FND+I SI  MDADVITIE SRS   LL  FR    Y   IGPG
Sbjct:  468 DYTEAMQAEIRHAVAVQEQIGLDVLVHGEAERNDMVEYFAEQLEGYVFTRFGWVQSYGSRCVKPAIIYGDLSRPRPMTVDWIRYAQQQTDRIMKGMLTGPVTMLMWSFAREDVPREVQARQLALAIRDEVCDLEAAGIRIIQIDEAAFREGLPLRREQWRHYLDWAVEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSQMELLEAFR-AFDYPNDIGPG 701
The following BLAST results are available for this feature:
BLAST of FC869109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
METE_PSEAB7.903e-8162.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA87.903e-8162.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVM7.903e-8162.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA71.348e-8062.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTU1.348e-8060.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA1.348e-8060.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP1.348e-8060.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO1.348e-8060.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL1.348e-8057.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU51.761e-8063.835-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31008F04EF AbioticL1 Citrus clementina cDNA clone C31008F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869109 ID=FC869109; Name=FC869109; organism=Citrus clementina; type=EST; length=713bp
GAGGAAGAATATGTTGCTTCCTTCAAGGAGGAAATCAACAGGGTTGTCAA
ACTCCAAGAAGAGCTTGATATTGATGTTCTTGTCCATGGAGAGCCTGAGA
GGAACAACATGGTTGAGTACTTTGGAGAGCAATTATCAGGTTTCGCCTTC
ACTGCCAATGGGTGGGTGCAATCCTATGGATCTCGCTGTGTGAAGCCGCC
CATCATCTATGGTGATGTGAGCCGTCCCAAGGCTATGACCGTCTTCTGGT
CCTCCTTGGCTCAGAGCATGACTGCTCGCCCAATGAAGGGAATGCTTACT
GGCCCTGTCACCATTCTCAACTGGTCCTTTGTCAGAAATGACCAGCCCAG
ACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCGAGG
ATCTTGAGAAGGCAGGCATTAACATTATTCAAATTGATGAGGCTGCCTTG
AGGGAAGGATTGCCTCTCAGGAAATCTGAGCATGCTTTCTACTTGGACTG
GGCAGTCCACTCCTTCAGAATCACCAACTGCGGCATCCAGGACACTACCC
AGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCA
ATTATTGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCTAA
TGAGAATCTCCTGTCAGTCTTCCGTGAGGGAGTCCAGTATGATGCTGCAA
TTGGCCCTGGCGT
back to top