FC869110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRIA_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 5.189e-51 Identity = 92/144 (63.89%), Postives = 109/144 (75.69%), Query Frame = 3 Query: 180 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA 611 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +L +H GDRTL +GLKGDPTY+VVE + + YGI+AVCTHLGCVVPWN+AENKF CPCHGSQY+ G+VVRGPAP SLAL+HA Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHA 153
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRIA_ANASP (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=petC1 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 5.189e-51 Identity = 92/144 (63.89%), Postives = 109/144 (75.69%), Query Frame = 3 Query: 180 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA 611 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +L +H GDRTL +GLKGDPTY+VVE + + YGI+AVCTHLGCVVPWN+AENKF CPCHGSQY+ G+VVRGPAP SLAL+HA Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHA 153
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_SYNS3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9311) GN=petC PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 6.777e-51 Identity = 91/153 (59.48%), Postives = 114/153 (74.51%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATL 617 T +PA VP MG+RQ MNLL G+V+ L P A +F PP GGGT+AKD +GN + A+ WL++H GDR+L +GLKGDPTYL+VE + SYGI+A+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ ++ Sbjct: 2 TQMPASDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGNSVTASGWLSSHAEGDRSLVQGLKGDPTYLIVEGVDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSV 154
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_SYNSC (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9605) GN=petC PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.156e-50 Identity = 90/154 (58.44%), Postives = 117/154 (75.97%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 T + + VP MG+RQ MNLL G+V+ L P A +F PP +GGGT+AKD +GN I A+ WL++H GDR+L +GLKGDPTYL+VE + + SYGI+A+CTHLGCVVPWNS NKF+CPCHGSQY++ G+VVRGPAPLSLALA+ +++ Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTSAKDELGNPITASGWLSSHPEGDRSLVQGLKGDPTYLIVEGEDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDSTGKVVRGPAPLSLALANVSVE 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_PROMM (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9313) GN=petC PE=3 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.156e-50 Identity = 90/154 (58.44%), Postives = 113/154 (73.38%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL H GDR+L +GLKGDPTYL+VE D + SYGI+A+CTHLGCVVPWNS NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+ ++ Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVE 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_PROM3 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9303) GN=petC PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.156e-50 Identity = 90/154 (58.44%), Postives = 113/154 (73.38%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL H GDR+L +GLKGDPTYL+VE D + SYGI+A+CTHLGCVVPWNS NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+ ++ Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVE 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_SYNR3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain RCC307) GN=petC PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.510e-50 Identity = 91/154 (59.09%), Postives = 112/154 (72.73%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 T I A VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GND+ A+ WL H GDR+L +GLKGDPTYL+V+ ++ YGI+A+CTHLGCVVPWN+ NKF+CPCHGSQY+ G+VVRGPAPLSLALAH ++ Sbjct: 2 TQISAKDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKASGAGGGTTAKDELGNDVTASGWLADHKEGDRSLVQGLKGDPTYLIVDGPDSIGDYGINAICTHLGCVVPWNAGANKFMCPCHGSQYDATGKVVRGPAPLSLALAHVNVE 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP6 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.972e-50 Identity = 91/149 (61.07%), Postives = 111/149 (74.50%), Query Frame = 3 Query: 171 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATL 617 A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++ + +L H GDRTL +GLKGDPTYLVVE + + YGI+AVCTHLGCVVPWN++ENKF CPCHGSQY+ G+VVRGPAPLSLALAH ++ Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSV 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_SYNE7 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus (strain PCC 7942) GN=petC PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.972e-50 Identity = 91/149 (61.07%), Postives = 111/149 (74.50%), Query Frame = 3 Query: 171 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATL 617 A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++ + +L H GDRTL +GLKGDPTYLVVE + + YGI+AVCTHLGCVVPWN++ENKF CPCHGSQY+ G+VVRGPAPLSLALAH ++ Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSV 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_MASLA (Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus laminosus GN=petC PE=1 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 1.972e-50 Identity = 90/147 (61.22%), Postives = 111/147 (75.51%), Query Frame = 3 Query: 180 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 VPDMG+RQ MNLL G V+ L P +F PP G+ GGGTTAKD +GN++ + +L +H GDR L +GLKGDPTY+VVE + + YGI+AVCTHLGCVVPWN+AENKF CPCHGSQY+ G+V+RGPAPLSLAL HAT++ Sbjct: 10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDETGKVIRGPAPLSLALCHATVQ 156 The following BLAST results are available for this feature:
BLAST of FC869110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869110 ID=FC869110; Name=FC869110; organism=Citrus clementina; type=EST; length=629bpback to top |