FC869110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_THEEB (Cytochrome b6-f complex iron-sulfur subunit OS=Thermosynechococcus elongatus (strain BP-1) GN=petC PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.575e-50 Identity = 89/146 (60.96%), Postives = 112/146 (76.71%), Query Frame = 3 Query: 180 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATL 617 VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++L H PGDR+L +G+KGDPTY++V +D +A+YG++AVCTHLGCVVPWN +ENKFICPCHGSQY++ G+VVRGPAPLSLAL AT+ Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPAPLSLALVKATV 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_SYNEL (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus GN=petC PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.575e-50 Identity = 89/146 (60.96%), Postives = 112/146 (76.71%), Query Frame = 3 Query: 180 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATL 617 VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++L H PGDR+L +G+KGDPTY++V +D +A+YG++AVCTHLGCVVPWN +ENKFICPCHGSQY++ G+VVRGPAPLSLAL AT+ Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPAPLSLALVKATV 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_PROMT (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL2A) GN=petC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.363e-50 Identity = 89/154 (57.79%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 T + VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGI+A+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH +++ Sbjct: 2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIE 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_PROM1 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL1A) GN=petC PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.363e-50 Identity = 89/154 (57.79%), Postives = 114/154 (74.03%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 T + VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGI+A+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH +++ Sbjct: 2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIE 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPX (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH8102) GN=petC PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 4.393e-50 Identity = 91/154 (59.09%), Postives = 113/154 (73.38%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 T + + VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN I A WL++H GDR+L +GLKGDPTYL+VE + SYGI+A+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ +++ Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGNAITATGWLSSHPEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVE 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_NOSSP (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc sp. (strain PCC 7906) GN=petC PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 7.493e-50 Identity = 91/144 (63.19%), Postives = 106/144 (73.61%), Query Frame = 3 Query: 180 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA 611 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +L GDR L +GLKGDPTY+VVE + + YGI+A+CTHLGCVVPWN AENKF CPCHGSQY+ G+VVRGPAPLSLALAHA Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGNDVSLSKFLENRNAGDRALVQGLKGDPTYIVVENKQAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAHA 153
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_NOSP7 (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=petC PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.180e-49 Identity = 89/146 (60.96%), Postives = 105/146 (71.92%), Query Frame = 3 Query: 180 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATL 617 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ +L GDR L +GLKGDPTY+VV+ + + YGI+A+CTHLGCVVPWN AENKF CPCHGSQY+ G+VVRGPAPLSLALAH + Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVTKFLENRNAGDRNLVQGLKGDPTYIVVDSKEAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAHTNV 155
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_PROM4 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9211) GN=petC PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.413e-48 Identity = 89/147 (60.54%), Postives = 109/147 (74.15%), Query Frame = 3 Query: 168 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 608 P+D VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I A+ WL+ H GDR+L +GLKGDPTYL+VE + + ++GI+A+CTHLGCVVPWNS NK+ICPCHGSQY+ G+VVRGPAPLSLALAH Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITASGWLSNHPAGDRSLVQGLKGDPTYLIVEGSEAIGNFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVRGPAPLSLALAH 151
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_PROMA (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus GN=petC PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 9.159e-48 Identity = 88/147 (59.86%), Postives = 106/147 (72.11%), Query Frame = 3 Query: 168 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 608 P+D VP MG+RQ MNLL G + L P A FF P G GGTTAKD +GN + A WL+ H GDR+L +GLKGDPTYL+V+ D + ++GI+A+CTHLGCVVPWNS NK+ICPCHGSQY+ G+VVRGPAPLSLAL H Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAVTATGWLSNHPAGDRSLVQGLKGDPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVRGPAPLSLALTH 151
BLAST of FC869110 vs. ExPASy Swiss-Prot
Match: UCRI_PROMS (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain AS9601) GN=petC PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.196e-47 Identity = 86/154 (55.84%), Postives = 108/154 (70.13%), Query Frame = 3 Query: 159 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGIDAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHATLK 620 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I WL TH GDR+L +GLKGDPTYL+V + + +G++A+CTHLGCVVPW+S NKFICPCHGSQY+ G+VVRGPAPLSLALAH ++ Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIE 155 The following BLAST results are available for this feature:
BLAST of FC869110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869110 ID=FC869110; Name=FC869110; organism=Citrus clementina; type=EST; length=629bpback to top |