FC869115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHEHH (Malate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVNT-PGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ PGV D+SH T V+GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVIPGVAVDLSHIPTAVEVKGFAGEDPTA-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALTY (Malate dehydrogenase OS=Salmonella typhimurium GN=mdh PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALTI (Malate dehydrogenase OS=Salmonella typhi GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALSV (Malate dehydrogenase OS=Salmonella schwarzengrund (strain CVM19633) GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALPK (Malate dehydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALPC (Malate dehydrogenase OS=Salmonella paratyphi C (strain RKS4594) GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALPB (Malate dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALPA (Malate dehydrogenase OS=Salmonella paratyphi A GN=mdh PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALNS (Malate dehydrogenase OS=Salmonella newport (strain SL254) GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALHS (Malate dehydrogenase OS=Salmonella heidelberg (strain SL476) GN=mdh PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.865e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92 The following BLAST results are available for this feature:
BLAST of FC869115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869115 ID=FC869115; Name=FC869115; organism=Citrus clementina; type=EST; length=408bpback to top |