FC869115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_VIBF1 (Malate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=mdh PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.887e-18 Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA++GAAGGIGQ LA+L+K P S L LYD+ TPGV AD+SH T ++G+ G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYCGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHEDO (Malate dehydrogenase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=mdh PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.887e-18 Identity = 51/92 (55.43%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVDADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_ALISL (Malate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=mdh PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.887e-18 Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA++GAAGGIGQ LA+L+K P S L LYD+ TPGV AD+SH T ++G+ G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYCGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_VIBCH (Malate dehydrogenase OS=Vibrio cholerae GN=mdh PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.383e-18 Identity = 50/92 (54.35%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA++GAAGGIGQ LA+L+K P S L LYD+ TPGV AD+SH T ++G+ G+ AL G D+V++ AGV RKPGM R DLFN Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVTIKGYAGEDPTP-ALEGADVVLVSAGVARKPGMDRADLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SALDC (Malate dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=mdh PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.383e-18 Identity = 51/92 (55.43%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV R+PGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARRPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_PROMH (Malate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=mdh PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.383e-18 Identity = 53/92 (57.61%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV AD+SH T V+GF G+ AL D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPAGSELSLYDIAPVTPGVAADLSHIPTQVRVKGFAGEDP-SPALKDADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_MORS2 (Malate dehydrogenase OS=Moritella sp. (strain 2D2) GN=mdh PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.383e-18 Identity = 52/92 (56.52%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T + GF G AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTDVTITGFSGIDPTA-ALVGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_ECOLU (Malate dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mdh PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.383e-18 Identity = 51/92 (55.43%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G ++V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGANVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_VIBVY (Malate dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=mdh PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.337e-18 Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA++GAAGGIGQ LA+L+K P S L LYD+ TPGV AD+SH T ++G+ G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAGEDPTP-ALEGADVVLISAGVARKPGMDRADLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_VIBVU (Malate dehydrogenase OS=Vibrio vulnificus GN=mdh PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.337e-18 Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA++GAAGGIGQ LA+L+K P S L LYD+ TPGV AD+SH T ++G+ G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTHVSIKGYAGEDPTP-ALEGADVVLISAGVARKPGMDRADLFN 92 The following BLAST results are available for this feature:
BLAST of FC869115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869115 ID=FC869115; Name=FC869115; organism=Citrus clementina; type=EST; length=408bpback to top |