FC869115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_COLP3 (Malate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=mdh PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.795e-20 Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVNT-PGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ L++L+K P S L LYDV PGV D+SH T V GF G+ L ALTG D+V+IPAG+PRKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVAGF-GRDDLNGALTGADIVLIPAGMPRKPGMDRADLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_MANSM (Malate dehydrogenase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.907e-20 Identity = 56/91 (61.54%), Postives = 63/91 (69.23%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLF 404 KVA+LGAAGGIGQ LA+L+K+ P S L LYDV TPGV D+SH T VV GF G E AL G D+V+I AGV RKPGMTR DLF Sbjct: 2 KVAVLGAAGGIGQALALLLKLQLPAGSSLSLYDVAPVTPGVAKDLSHIPTDVVVEGFAGTDPSE-ALKGADIVLISAGVARKPGMTRADLF 91
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_ALTMD (Malate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.907e-20 Identity = 54/92 (58.70%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVNT-PGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ L++L+K P S L LYDV PGV D+SH T V G G+ L +ALTG D+V+IPAG+PRKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSDLALYDVAPVVPGVAVDLSHIPTAVKVTGH-GKDDLADALTGADVVLIPAGMPRKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_PASMU (Malate dehydrogenase OS=Pasteurella multocida GN=mdh PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.163e-19 Identity = 54/92 (58.70%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K+ P S L LYD+ TPGV AD+SH T V+GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKVQGFAGEDPTP-ALQGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_HAES2 (Malate dehydrogenase OS=Haemophilus somnus (strain 2336) GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.984e-19 Identity = 54/95 (56.84%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQ---PQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 K+A+LGAAGGIGQ LA+L+K+ P S L LYD+ TPGV AD+SH T ++GF G+ P LENA D+V+I AGV RKPGM R DLFN Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPIPALENA----DVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_HAES1 (Malate dehydrogenase OS=Haemophilus somnus (strain 129Pt) GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.984e-19 Identity = 54/95 (56.84%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQ---PQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 K+A+LGAAGGIGQ LA+L+K+ P S L LYD+ TPGV AD+SH T ++GF G+ P LENA D+V+I AGV RKPGM R DLFN Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPTPALENA----DVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_ACTSZ (Malate dehydrogenase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.984e-19 Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KV +LGA+GGIGQPL++L+K++ P S L LYDV TPGV DISH T V GF G E AL G D+V+I AGV RKPGMTR DLFN Sbjct: 2 KVTLLGASGGIGQPLSLLLKLHLPAESDLSLYDVAPVTPGVAKDISHIPTSVEVEGFGGDDPSE-ALKGADIVLICAGVARKPGMTRADLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHEWM (Malate dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=mdh PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.385e-19 Identity = 54/92 (58.70%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T V+GF GQ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPADSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAGQDP-SPALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHEFN (Malate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=mdh PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.385e-19 Identity = 53/92 (57.61%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T V+GF GQ + AL G D+V++ AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTDVEVKGFAGQDPTD-ALVGADVVLMSAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHESW (Malate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=mdh PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.540e-19 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPTP-ALVGADVVLISAGVARKPGMDRSDLFN 92 The following BLAST results are available for this feature:
BLAST of FC869115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869115 ID=FC869115; Name=FC869115; organism=Citrus clementina; type=EST; length=408bpback to top |