FC869115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_YERE8 (Malate dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSDLSLYDIAPVTPGVAVDLSHIPTAVNIKGFSGEDATP-ALKGADIVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHISS (Malate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHIFL (Malate dehydrogenase OS=Shigella flexneri GN=mdh PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHIF8 (Malate dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHIDS (Malate dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHIBS (Malate dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_SHIB3 (Malate dehydrogenase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_ECOUT (Malate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=mdh PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_ECOSM (Malate dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92
BLAST of FC869115 vs. ExPASy Swiss-Prot
Match: MDH_ECOSE (Malate dehydrogenase OS=Escherichia coli (strain SE11) GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 138 KVAILGAAGGIGQPLAMLMKIN-PLVSILHLYDVVN-TPGVTADISHTDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFN 407 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH T ++GF G+ AL G D+V+I AGV RKPGM R DLFN Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFN 92 The following BLAST results are available for this feature:
BLAST of FC869115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869115 ID=FC869115; Name=FC869115; organism=Citrus clementina; type=EST; length=408bpback to top |