FC869119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16 Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 259 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDG-ISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 +K INGFGRIGR LR + ++VVA+ND ++ ++ KYDS G F+ V+ DG + V+GK I V + ++P N+PWG +G + ++E TGVF E A H++ KKV+ Sbjct: 3 VKAGINGFGRIGRIVLR--NALLHGDIDVVAVNDPFIDLEYMVYMFKYDSVHGRFKGSVE--AKDGKLYVEGKPIHVFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVI 119
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16 Identity = 52/119 (43.70%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 262 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 K+ INGFGRIGR LR D EVVA+ND V +L KYDST G F+ V G + V+GK I V R+P N+ W G + ++E TGVF + A H + GAKKV+ Sbjct: 3 KIGINGFGRIGRLVLRA---ALDKGAEVVAVNDPFIDVNYMVYLFKYDSTHGRFKGTVAADG-GFLVVNGKKITVFCERDPTNINWASAGAEYIVESTGVFTTIDKASAHFKGGAKKVV 117
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16 Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 265 VAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 + INGFGRIGR LR ++ V+AIN+ VK ++ KYDST G F+ V+ + + + V+G I V + ++P N+ W +G + ++E TG+F+ E AG H++ GAKKV+ Sbjct: 5 IGINGFGRIGRLVLRA--SLENPECRVLAINEPFMDVKYMVYMFKYDSTHGRFKGTVEDINGEFV-VNGNKIHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVV 119
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3P_CITFR (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Citrobacter freundii GN=gap PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 331 SPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 S +E+VAIND +++LKYDST G F V+ V + V+GK I+V + R+P NL W ++G+D+V E TG+F+ E A KHI AGAKKV+ Sbjct: 10 SDIEIVAINDLLDADYMAYMLKYDSTHGRFNGTVE-VKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVV 103
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16 Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 259 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 +KV +NGFGRIGR R ++VVAIND + ++ KYDST G F+ VK + ++G I + R+P N+ W D G + V+E TGVF E AG H++ GAK+V+ Sbjct: 2 VKVGVNGFGRIGRLVTRA--AVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVK-AENGKLVINGHAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVI 118
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16 Identity = 51/121 (42.15%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 256 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 K+K+ INGFGRIGR +R R D +EVVAIND + +++ KYDS + V DG V+G+ I + +P + WG G D+VIE TGVF D A H+ GAKKV+ Sbjct: 4 KIKIGINGFGRIGRLVMRATMLRPD--IEVVAINDPFIDAEYMAYMFKYDSVHKTWPGHVNG-SKDGFLVEGRKIHTFTESDPSKINWGAAGADIVIESTGVFTDIAKATAHLTGGAKKVI 121
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3PC_MAGLI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16 Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 256 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEA-DVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 K+K+ INGFGRIGR R R D +E+VA+ND +++ KYDS G ++ ++K + + K + V RNP +PWG+ G + V+E TGVF D++ A H++ GAKKV+ Sbjct: 5 KIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDSKTLLFGEKPVTVFGVRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVI 124
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3P3_ECOLI (Putative glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli (strain K12) GN=gapC PE=5 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.979e-16 Identity = 53/121 (43.80%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 262 KVAINGFGRIGRNFLRCWHGRK---DSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 KV INGFGRIGR L GR S ++VVAIND K ++LLK+DS G F V D + VDGK I V + + N+PW G ++++E TG + E + H+ AGAKKVL Sbjct: 3 KVGINGFGRIGRLVL----GRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVD-FTEDSLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVL 118
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16 Identity = 46/120 (38.33%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 259 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 +K+ +NGFGRIGR R +++VAIND + ++ KYDST G F VK + ++G+ I + R+P N+ WGD G + V+E TGVF E A H++ GAK+V+ Sbjct: 2 VKIGVNGFGRIGRLVTRA--AFTCDKVQIVAINDPFIDLNYMVYMFKYDSTHGRFHGTVK-AENGKLVINGQAITIFQERDPANIKWGDAGAEYVVESTGVFTTTEKASAHLKGGAKRVV 118
BLAST of FC869119 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16 Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 247 AQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDG-KVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVL 615 A K+++ INGFGRIGR R R D +E+VA+ND + +++ KYDS G ++ + + + + G K + V RNP ++PW + G D V+E TGVF D++ A H++ GAKKV+ Sbjct: 2 ADKKIRIGINGFGRIGRLVARVVLQRDD--VELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVV 124 The following BLAST results are available for this feature:
BLAST of FC869119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869119 ID=FC869119; Name=FC869119; organism=Citrus clementina; type=EST; length=615bpback to top |