FC869120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: WWOX_MOUSE (WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 56/147 (38.10%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 226 EDMQAR-IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITELMVPLLEKAAPDARVITVSS 663 E +Q R GK +VTGAN+GIG+ TA+ A GA V + CR+ + A+S I + V DL+ + ++ FA F K+ +HVLV NAG +T +G E F VN LG + + +L+ +L +++P ARVI VSS Sbjct: 115 EILQGRDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSSP-ARVIVVSS 260
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 51/153 (33.33%), Postives = 86/153 (56.21%), Query Frame = 1 Query: 244 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSK-------------TGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITELMVPLLEKAAPDARVITVSS 663 + GK ++TGAN+G+G ATA L GA V M CR + + E A +R + +G + + DL+S+ +++F ++ + VL+NNAG+ + + T +GFE+ F VN LG + +T L++ LL+ +AP +R++ VSS Sbjct: 41 MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAP-SRIVVVSS 192
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: PORA_ARATH (Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 56/151 (37.09%), Postives = 82/151 (54.30%), Query Frame = 1 Query: 229 DMQARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGE-TALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGVLE---NNRLITSEGFELNFAVNVLGTYTITELMVPLLEKA-APDARVITVSS 663 D + + N VVTGA++G+G ATA+ LA G V M CR K E A SA K +HL DL+S+ ++ F + F + P+ VLV NA V + N T+EGFEL+ +N LG + ++ L++ L+ + P R+I V S Sbjct: 85 DRKKTLRKGNVVVTGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAQSAGMPKDSYTVMHL---DLASLDSVRQFVDNFRRAEMPLDVLVCNAAVYQPTANQPTFTAEGFELSVGINHLGHFLLSRLLIDDLKNSDYPSKRLIIVGS 232
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: PORC_ARATH (Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 1 Query: 223 PEDMQARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAI-RSKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGVLE---NNRLITSEGFELNFAVNVLGTYTITELMVPLLEKA-APDARVITVSS 663 PE + +G V+TGA++G+G ATA+ LA G V M CR+ K E A ++ SK +HL DL+S+ +K F F ++P+ VLV NA V + T+EGFE++ N LG + ++ L++ L+K+ P R+I V S Sbjct: 81 PEQKKTERKG-TAVITGASSGLGLATAKALADTGKWHVIMACRNFLKAEKAARSVGMSKEDYTVMHL---DLASLESVKQFVENFRRTEQPLDVLVCNAAVYQPTAKEPSFTAEGFEISVGTNHLGHFLLSRLLLDDLKKSDYPSKRMIIVGS 229
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: PORB_ARATH (Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 220 KPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAI-RSKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITELMVPLLEKA-APDARVITVSS 663 K D + + N VVTGA++G+G ATA+ LA G V M CR K E A ++ K +HL DL+S+ ++ F + F + P+ VLV NA V ++EGFEL+ A N LG + + L++ L+K+ P R+I V S Sbjct: 78 KSVDGKKTLRKGNVVVTGASSGLGLATAKALAETGKWNVIMACRDFLKAERAAKSVGMPKDSYTVMHL---DLASLDSVRQFVDNFRRTETPLDVLVCNAAVYFPTAKEPTYSAEGFELSVATNHLGHFLLARLLLDDLKKSDYPSKRLIIVGS 228
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: POR_PEA (Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 256 NCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITELMVPLLEKA-APDARVITVSS 663 N V+TGA++G+G ATA+ LA G V M CR K A +A + EN + DL+S+ ++ F + F + P+ VL+NNA V T++GFE++ N LG + ++ L++ L+K+ P R+I V S Sbjct: 88 NVVITGASSGLGLATAKALAESGKWHVIMACRDYLK--AARAAKSAGLAKENYTIMHLDLASLDSVRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHFLLSRLLLEDLKKSDYPSKRLIIVGS 226
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: PORA_CUCSA (Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 262 VVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITELMVPLLEKAA-PDARVITVSS 663 V+TGA++G+G ATA+ LA G V M CR K E A A + EN + DL+S+ ++ F + F +P+ VLV NA V T+EGFEL+ N LG + ++ L++ L K++ P R+I V S Sbjct: 90 VITGASSGLGLATAKALAETGKWHVIMACRDFLKAERA--AKSAGITKENYTVMHLDLASLDSVRQFVDNFRQSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSSYPSKRLIIVGS 226
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: OXIR_STRLI (Probable oxidoreductase OS=Streptomyces lividans PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12 Identity = 50/149 (33.56%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 244 IEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGVLE-NNRLITSEGFELNFAVNVLGTYTITELMVPLLEKAAPDARVITVSSGGMYTAHL 687 + G+ VVTG +G+G T LA+ GA V + R + E + + G VH E DLS + + SFA + P+ +LV NAG++ R +T G+E+ A N LG + + + L A AR++ VSSG AHL Sbjct: 3 LTGRRAVVTGGASGLGAETVRALAAAGAEVTIATRHPQSAEPLVQE-AAAAGAGRVHAEALDLSDVASVDSFARAWR---GPLDILVANAGIMALPTRTLTPYGWEMQLATNYLGHFALATGLHAALRDAG-SARIVVVSSG----AHL 142
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: POR_MARPA (Protochlorophyllide reductase, chloroplastic OS=Marchantia paleacea GN=PORA PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 259 CVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIR-SKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITELMVPLLEKAAPD-ARVITVSS 663 C++TGA++G+G ATA+ LA G V M CR K E A ++ K +H CDL+S +++F + F ++ + VLV NA V + ++EGFEL+ N +G + + L++ L+KA R+I V S Sbjct: 148 CIITGASSGLGLATAKALADTGEWHVIMACRDFLKAERAARSVGIPKDSYTVIH---CDLASFDSVRAFVDNFRRTERQLDVLVCNAAVYFPTDKEPKFSAEGFELSVGTNHMGHFLLARLLMEDLQKAKDSLKRMIIVGS 285
BLAST of FC869120 vs. ExPASy Swiss-Prot
Match: POR_DAUCA (Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 223 PEDMQARIEGK------NCVVTGANAGIGYATAEGLASRGA-TVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKDKPVHVLVNNAGV---LENNRLITSEGFELNFAVNVLGTYTITELMVPLLEKA-APDARVITVSS 663 P +A EGK + ++TGA++G+G ATA+ LA G V M CR K E A A + EN + DL+S+ ++ F F ++P+ VLV NA V T++GFEL+ N LG + ++ L++ L K+ P R+I V S Sbjct: 70 PSVNRATGEGKKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMACRDFLKAERA--AKSAGMPKENYTIMHLDLASLDSVRQFVETFRRSERPLDVLVCNAAVYFPTAKEPTYTADGFELSVGTNHLGHFLLSRLLLDDLNKSDYPSKRLIIVGS 225 The following BLAST results are available for this feature:
BLAST of FC869120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869120 ID=FC869120; Name=FC869120; organism=Citrus clementina; type=EST; length=697bpback to top |