FC869132

Overview
NameFC869132
Unique NameFC869132
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:65..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.257e-19
Identity = 57/182 (31.32%), Postives = 98/182 (53.85%), Query Frame = 3
Query:  153 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            PVIDM+ L+ EE   + + K+   C+ WGFF+LVNHG+S   ++ +++  +  +N  ME++ K       +E      V SE   LDW   F +  LPV        P L    R+ ++ ++ +L+ LAE L+  + E + ++   +++ F   +  T G +++ YPPCP+PE + GL  H+
Sbjct:    5 PVIDMEKLNGEERAPT-MEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEA-----VQSEINDLDWESTFFLRHLPV--SNISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHT 178          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 57/212 (26.89%), Postives = 104/212 (49.06%), Query Frame = 3
Query:   81 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRP--GDMEGFG----QAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +P  +IR + + P I+     + ++P+ID     S+   +  + ++      WG +Q+VNH + +  + KL+   + FF L  EEK+ Y + P    +EG+G    +     +  K  W D       P  +     +PK PPS RE  E Y+  L  + E L   +   L ++ +E+++    +N    +++NYYPPCP+P+  +G+  H+
Sbjct:   17 IPAEFIRSENEQPGITTVHGKVLEVPIIDF----SDPDEEKLIVQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHT 224          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.237e-19
Identity = 58/209 (27.75%), Postives = 102/209 (48.80%), Query Frame = 3
Query:   81 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPG---DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +P  +IRP+++ P  +       +IP ID+     +   D  +  +    +EWG FQ+ NHG+ +  + KL+   + FF L  EEK+ Y  RP    D++G+G       E K  W D       P        +PK PPS R   E Y+  ++ + + L + +   L ++   ++E    ++    +++NYYPPCP+P+  +G+  H+
Sbjct:   19 IPAEFIRPEKEQPASTTYHGPAPEIPTIDLD----DPVQDRLVRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVY-SRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHT 222          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.064e-18
Identity = 48/199 (24.12%), Postives = 95/199 (47.74%), Query Frame = 3
Query:   93 YIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            ++R + + P ++ D     +P+I +  +           ++   C++WG FQ+++HG+    +  + +    FF L  E+K +Y    G   GF  +  +  E   DW ++ +  + PV  R    +P+ P      +E YS  L  L+ NL+  + E + ++ E + +   +    + +N+YP CPQP+  +GL  H+
Sbjct:   24 FVRDEDERPKVAHDRFSDAVPLISLHGIDGARRAQIR-DRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHT 221          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.064e-18
Identity = 57/186 (30.65%), Postives = 98/186 (52.69%), Query Frame = 3
Query:  144 SQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFEN----GTAGMRMNYYPPCPQPEKVMGLSPHS 689
            S  PVI+M+ L  EE   + + +LD  C+ WGFF+++NHG+ST  +++++K  +  +    E++   +      EG      V++ +KLDW   F +  LP         P L    R  ++ ++ EL+TLAE L+  + E L ++   + + F       T G +++ YPPCP+P+ V GL  H+
Sbjct:    5 STFPVINMELLAGEER-PAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPESNIAD--IPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHT 184          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.064e-18
Identity = 63/221 (28.51%), Postives = 105/221 (47.51%), Query Frame = 3
Query:   48 VQELVKNPALVVPDRYIRP----DQDSPLISDDTLISQIPVIDMQSLHSEESM--DSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEG-FGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            V+ LV +    VP  +  P        PL SD   +  IP ID+     ++++  ++ + ++     +WGFFQ++NHG+S   LEK+KK V  F   S E +K+++ R       +   F +      +W D FS  T+     KP     LP   R+ +  YS ++  L + L   + E L ++   + +   +    M  +YYPPCP+P+  +G S HS
Sbjct:   26 VKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFS-CTMAPDTPKPQ---DLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHS 242          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 57/186 (30.65%), Postives = 98/186 (52.69%), Query Frame = 3
Query:  144 SQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFEN----GTAGMRMNYYPPCPQPEKVMGLSPHS 689
            S  PVI+M+ L  EE   + + +LD  C+ WGFF+++NHG+ST  +++++K  +  +    E++   +      EG      V++ +KLDW   F +  LP         P L    R  ++ ++ EL+TLAE L+  + E L ++   + + F       T G +++ YPPCP+P+ V GL  H+
Sbjct:    5 STFPVINMELLAGEER-PAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPESNIAD--IPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHT 184          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18
Identity = 60/191 (31.41%), Postives = 97/191 (50.79%), Query Frame = 3
Query:  150 IPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDM------EGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTA-----GMRMNYYPPCPQPEKVMGLSPHS 689
            IPVID   L  +E  ++ +A++   C+EWGFFQLVNHG+    LE++KK     + L   E++    +P  +      EG GQ         +DW D+F        L+  + +P  PP   ET++ Y  E++ LAE ++  M E L  +   +++ F          G ++++YPPCP+ + V GL  H+
Sbjct:    3 IPVIDFSKLDGKERAET-MARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKL--REERFEGSKPVQLLDTLVKEGDGQRL-----DNVDWEDVFV-------LQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHT 178          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 53/186 (28.49%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  141 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +   P++DM  L++E+   S +  +   C+ WGFF+ VNHG+S   ++ ++K  +  +   ME++ K       +E      V SE   LDW   F +  LPV        P L    R+ ++ ++++L+ LAE L+  + E L ++   +++ F   +    G +++ YPPCP+PE + GL  H+
Sbjct:    1 MENFPIVDMGKLNTEDRK-STMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLE-----CVQSEIDDLDWESTFFLRHLPVSSISE--IPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHT 178          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 61/211 (28.91%), Postives = 96/211 (45.50%), Query Frame = 3
Query:   81 VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHS--EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSM-----MTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPH 686
            +P+ ++ P+ D+   S   L   +PV+D+  L     E +    A++   C   GFFQ+  HG+  A           FF L + EK++  + PG + G+  A       KL W +  S         PV        L P   P  R   + Y  E+K L+  ++  +   L ++    REFF + ++ MR NYYPPCP+PE+ +G  PH
Sbjct:   42 IPEPFVWPNGDARPASAAEL--DMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPH 249          
The following BLAST results are available for this feature:
BLAST of FC869132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
ACCO_ACTDE1.257e-1931.321-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
FLS_MALDO2.800e-1926.89Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS_CITUN6.237e-1927.75Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FL3H_HORVU1.064e-1824.12Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
ACCO1_ORYSI1.064e-1830.651-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCH3_ARATH1.064e-1828.511-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO1_ORYSJ1.389e-1830.651-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_MUSAC2.370e-1831.411-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO_PEA6.896e-1828.491-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
GAOX2_ORYSJ9.006e-1828.91Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31008H03EF AbioticL1 Citrus clementina cDNA clone C31008H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869132 ID=FC869132; Name=FC869132; organism=Citrus clementina; type=EST; length=691bp
AGGAACAAAAGATGGTCCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTT
CAAGAGTTGGTCAAGAATCCGGCGTTAGTTGTCCCCGACAGATACATACG
TCCAGATCAAGATTCACCCCTCATTTCTGATGATACTTTGATTTCACAGA
TACCAGTTATTGACATGCAAAGCTTACATTCTGAAGAATCAATGGATTCT
GAGTTAGCCAAGCTCGACTTCGTATGCAAAGAATGGGGTTTTTTCCAGCT
GGTAAATCATGGAATGAGCACAGCATTTCTAGAGAAATTAAAGAAAGAGG
TTGAGGGATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAG
CGTCCAGGGGATATGGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGA
ACAAAAGCTTGATTGGGCTGACCTTTTCTCCATGATGACTCTTCCAGTTC
ATCTGAGGAAACCACATTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAG
ACCTTGGAAGTTTACTCAATGGAATTAAAAACCCTAGCCGAGAACCTAAT
ATCGAAAATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATGAGAGAAT
TCTTTGAAAATGGNACTGCAGGAATGAGGATGAATTATTACCCTCCATGT
CCTCAGCCCGAGAAGGTTATGGGCCTGTCGCCGCATTCTGA
back to top