FC869132

Overview
NameFC869132
Unique NameFC869132
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:65..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 51/186 (27.42%), Postives = 93/186 (50.00%), Query Frame = 3
Query:  141 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +   P+I+++ L+  E + + + K++  C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V  E   +DW   F +  LP         P L    RE +  +   L+ LAE L+  + E L ++   ++  F   +    G +++ YPPCP+P+ + GL  H+
Sbjct:    1 MENFPIINLEKLNGAERV-ATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEG-----VEVEVTDMDWESTFFLRHLP--SSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHT 178          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 59/218 (27.06%), Postives = 97/218 (44.50%), Query Frame = 3
Query:   48 VQELVKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQA---FVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            V+ LV +    VP  ++ P +D     +   +   PVID+Q +  +     E+  K+    ++WGFFQ+VNHG+ T+ L++  +    FF    E KK+Y+ R    +    +      S      W D       P     P    + P    E+L  +S ++K L   L+  + E L +    ++++ +        NYYPPCPQPE  MG   H+
Sbjct:   26 VKGLVDSGITKVPQIFVLPPKDRAKKCETHFV--FPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAP----NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHT 237          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 53/182 (29.12%), Postives = 96/182 (52.75%), Query Frame = 3
Query:  153 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            PVI+M +L+ E  + S L +++  C+ WGFF+LVNHG+S   ++K++K  +  +   ME++ K       +   G   V +E    DW   F +  LPV          L    ++ ++ ++ EL+ LAE ++  + E L ++   +++ F   +    G +++ YPPCP+PE + GL  H+
Sbjct:    6 PVINMNNLNGESRV-SVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEM-----VASKGLDSVETEINDTDWESTFFLRHLPVSNMSE--IGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHT 179          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 50/186 (26.88%), Postives = 93/186 (50.00%), Query Frame = 3
Query:  141 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +   P+I+++ L+ +E  ++ +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LP         P L    RE +  ++  L+ LAE L+  + E L ++   ++  F   +    G +++ YPPCP+P+ + GL  H+
Sbjct:    1 MENFPIINLEKLNGDERANT-MEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPT--SNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHT 178          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.699e-16
Identity = 50/186 (26.88%), Postives = 93/186 (50.00%), Query Frame = 3
Query:  141 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +   P+I++++L+ +E   + +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LP         P L    RE +  ++  L+ LAE L+  + E L ++   ++  F   +    G +++ YPPCP+P+ + GL  H+
Sbjct:    1 MENFPIINLENLNGDERAKT-MEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPT--SNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHT 178          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.897e-16
Identity = 55/183 (30.05%), Postives = 87/183 (47.54%), Query Frame = 3
Query:  147 QIPVIDMQSL--HSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            ++PVID+  L   +EE  +     +    +EWGFFQ++NHG+S   LEK+++E    F    ++K K  +       +G     S  Q L W++ F +    +   K         +L  T+E ++ E + LA  L   + E         +E     T  +RMN YPPCP+P +V GL PH+
Sbjct:   41 ELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFSAGSYRWGTPSATSIRQ-LSWSEAFHVPMTDISDNKDFT------TLSSTMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHT 216          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16
Identity = 56/191 (29.32%), Postives = 93/191 (48.69%), Query Frame = 3
Query:  150 IPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWAD--LFSMMTLPVHLRKPHLFPKLPPSLRE---TLEVYSMELKTLAENLISKMGEVLNIKDEEM------REFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +PV+DM+   + E++           ++WG F L  HG+    L +++  + G F L   EK +  +RPGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E++ LA+ L+      L +  E++      ++  E  TA M +N+YP CP P++ +GL  H+
Sbjct:   49 VPVVDMRDPCAAEAVA-------LAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHT 230          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16
Identity = 49/186 (26.34%), Postives = 91/186 (48.92%), Query Frame = 3
Query:  141 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +   P+I +  ++  E   + +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V +E   +DW   F +  LP+        P L    RE +  ++  L+ LAE L+  + E L ++   ++  F   +    G +++ YPPCP+P+ + GL  H+
Sbjct:    1 MENFPIISLDKVNGVERA-ATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHT 178          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16
Identity = 51/182 (28.02%), Postives = 85/182 (46.70%), Query Frame = 3
Query:  150 IPVIDMQSLHSEE-SMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQR-PGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            IP ID++   ++  +  S + K+    ++WGFFQ++NHG+    LEK+   +  F     E KK ++ R P     +   F +      +W D     T P     P     LP +  E +  YS E+  L + L   + E L +    +++     +  +  +YYPPCPQP+  +GL+ HS
Sbjct:   62 IPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAP----DPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHS 239          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16
Identity = 59/201 (29.35%), Postives = 91/201 (45.27%), Query Frame = 3
Query:  117 PLISDDTLISQIPVIDMQSLHSEESMDSELA--KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKL------DWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRM--NYYPPCPQPEKVMGLSPHS 689
            PL SD   +  IP ID+     ++++  + A   +     +WGFFQ++NHG+S   LEK+K  V  F     E +K  + R      FG+ F+      L      +W D F     P     P     LP   R+ +  YS ++  L E L   + E L +    +++       G+RM  +Y+PPCP+P+   G S HS
Sbjct:   53 PLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSR-----DFGRKFIYLSNFDLYTAAAANWRDTFYCYMAP----DPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDM--ECLKGLRMLCHYFPPCPEPDLTFGTSKHS 242          
The following BLAST results are available for this feature:
BLAST of FC869132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
ACCO2_SOLLC5.838e-1727.421-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCH3_SOLLC7.624e-1727.061-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO3_CUCME9.958e-1729.121-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO1_SOLLC9.958e-1726.881-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO4_SOLLC1.699e-1626.881-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
G2OX8_ARATH2.897e-1630.05Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
G3O22_WHEAT3.784e-1629.32Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
ACCO1_PETHY4.942e-1626.341-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCH1_ARATH4.942e-1628.021-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH8.430e-1629.351-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionC31008H03EF AbioticL1 Citrus clementina cDNA clone C31008H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869132 ID=FC869132; Name=FC869132; organism=Citrus clementina; type=EST; length=691bp
AGGAACAAAAGATGGTCCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTT
CAAGAGTTGGTCAAGAATCCGGCGTTAGTTGTCCCCGACAGATACATACG
TCCAGATCAAGATTCACCCCTCATTTCTGATGATACTTTGATTTCACAGA
TACCAGTTATTGACATGCAAAGCTTACATTCTGAAGAATCAATGGATTCT
GAGTTAGCCAAGCTCGACTTCGTATGCAAAGAATGGGGTTTTTTCCAGCT
GGTAAATCATGGAATGAGCACAGCATTTCTAGAGAAATTAAAGAAAGAGG
TTGAGGGATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAG
CGTCCAGGGGATATGGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGA
ACAAAAGCTTGATTGGGCTGACCTTTTCTCCATGATGACTCTTCCAGTTC
ATCTGAGGAAACCACATTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAG
ACCTTGGAAGTTTACTCAATGGAATTAAAAACCCTAGCCGAGAACCTAAT
ATCGAAAATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATGAGAGAAT
TCTTTGAAAATGGNACTGCAGGAATGAGGATGAATTATTACCCTCCATGT
CCTCAGCCCGAGAAGGTTATGGGCCTGTCGCCGCATTCTGA
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