FC869132

Overview
NameFC869132
Unique NameFC869132
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15
Identity = 56/191 (29.32%), Postives = 91/191 (47.64%), Query Frame = 3
Query:  150 IPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWAD--LFSMMTLPVHLRKPHLFPKLPPSLRE---TLEVYSMELKTLAENLISKMGEVLNIKDEEM------REFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +PV+DM+   + E++           ++WG F L  HG+    L  ++  + G F L   EK +  +RPGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E++ LA+ L+      L +  E++       +  E  TA M +N+YP CP P++ +GL  H+
Sbjct:   49 VPVVDMRDPCAAEAVA-------LAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHT 230          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 51/189 (26.98%), Postives = 95/189 (50.26%), Query Frame = 3
Query:  141 ISQIPVIDMQSLHSEESMDSELA--KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDM-EGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENG-TAGMRMNYYPPCPQPEKVMGLSPHS 689
            I   P+IDM+ L++   ++  L   ++   C  WGFFQ+VNH +S   ++K+++  +  +    E+K K      DM +  G     S+   +DW   F +   P         P L    R+ ++ ++ +++ L+E L+  + E L ++   ++  F   NG T G +++ YPPCP+P+ + GL  H+
Sbjct:    4 IVNFPIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFK------DMVQTKGLVSAESQVNDIDWESTFYLRHRPT--SNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHT 184          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 47/182 (25.82%), Postives = 94/182 (51.65%), Query Frame = 3
Query:  153 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            P+I++++++ ++     L +++  C+ WGFF+LVNHG+   FL+ ++K     +   MEE+ K       +E        +E   +DW   F +  LP           L    ++ ++ ++ +L+ LAE L+  + E L ++   +++ F   +  T G +++ YPPCP+P+ + GL  H+
Sbjct:    5 PIINLENIN-DDGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEA-----AQAEVNDMDWESTFFLRHLPE--SNISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHT 178          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15
Identity = 55/209 (26.32%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   99 RPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKY--------WQRPGDMEG--FGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRM---NYYPPCPQPEKVMGLSPH 686
            R ++D P+ +D      +P+ID+Q  H    +  ++ K    C+++G FQ++NHG     + +  +  + FF L  EEK+K+        ++ P + +   + +   +S E+ L W D  +    P+     + +P+ P   RE +  YS+E++ L   ++  + E L +K      +F+N  + ++M   NYYPPCP P   +G   H
Sbjct:   24 RAEKDVPVGND------VPIIDLQQHH--HLLVQQITK---ACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLK----LGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGH 217          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15
Identity = 51/185 (27.57%), Postives = 93/185 (50.27%), Query Frame = 3
Query:  153 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEK-KKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENG-----TAGMRMNYYPPCPQPEKVMGLSPHS 689
            PVI+M+ L   +   + +A L   C+ WG ++L+NHG+S   + +++   +  +    E++ K++  +  D           E + LDW   F +  LP         P L    R T++ +++EL+ LAE L+  + E L ++   +++ F  G     T G +++ YPPCP+PE + GL  H+
Sbjct:    7 PVINMELLQGSQR-PAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEFASKTLD------TVENVEPENLDWESTFFLRHLPTS--NISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHT 182          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15
Identity = 49/188 (26.06%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  141 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGM-----RMNYYPPCPQPEKVMGLSPHS 689
            +   PVI+M+ L  +E   + +  ++  C+ WGFF+LVNH +    ++++++  +  +   ME++ K       +EG      V +   +DW   F +  LPV        P L    R+ ++ ++ +L+ LAE ++  + E L ++   ++  F   T G+     +++ YPPCP+PE   GL  H+
Sbjct:    1 MDSFPVINMEKLEGQERA-ATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELM-ASKVEG-----AVVDANDMDWESTFFIRHLPVSNLSE--IPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHT 179          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14
Identity = 52/194 (26.80%), Postives = 86/194 (44.33%), Query Frame = 3
Query:  132 DTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAG--------MRMNYYPPCPQPEKVMGLSPHS 689
            +T    IPVI +       S   E   L   C+EWG F + +HG+S + L  +  +++  F+L M  K    + P +  G+G   +     KL W++ FS+M   +      L+P         +E Y   +  L+  LIS +   L +  E++     + T          +++N YP CP P   MGL+PH+
Sbjct:   41 ETTSGPIPVISL-------SNPEEHGLLRQACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHT 227          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14
Identity = 51/185 (27.57%), Postives = 92/185 (49.73%), Query Frame = 3
Query:  153 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEK-KKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENG-----TAGMRMNYYPPCPQPEKVMGLSPHS 689
            PVI+M+ L   +   + +A L   C+ WGFF+L+NHG+S   + +++   +  +    E++ K++  +  D      +    +   LDW   F +  LP         P L    R T++ ++ EL+ LAE L+  + E L ++   ++  F  G     T G +++ YPPCP+P+ + GL  H+
Sbjct:    7 PVINMELLQGSQR-PAAMALLRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEFASKTLD------SVENVDPDNLDWESTFFLRHLPT--SNISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHT 182          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.542e-14
Identity = 53/242 (21.90%), Postives = 100/242 (41.32%), Query Frame = 3
Query:   48 VQELVKNPALVVPDRYIRPDQDSPLISD----------DTLISQIPVID----MQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRP--GDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLIS--KMGEVLNIKDEEMREFFENGTAG----------MRMNYYPPCPQPEKVMGLSPHS 689
            V+ L  +    +P  Y+RP  +   + D          D    +IPV+D    + S   ++  D  +  +     +WG   +  HG+    +++L+     FF L +++K+ Y   P  G ++G+G     +   + +W D    +  P  L    L+P  PP        +    + LA  L++   MG +   + + + +     T            +++NYYP CPQPE  +G+  H+
Sbjct:   14 VEALSLSGLSAIPPEYVRPADERAGLGDAFDLARTHANDHTAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHT 255          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.626e-14
Identity = 46/186 (24.73%), Postives = 92/186 (49.46%), Query Frame = 3
Query:  141 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +   PVI+M+ ++ EE   + +  ++  C+ WGFF+LVNHG+    ++ +++  +  +   ME++ K       +EG     + +E   +DW   + +  LP         P L    R  ++ ++  L+ LAE L+  + E L ++   +++ F   +    G ++  YPPCP+ + + GL  H+
Sbjct:    1 MESFPVINMEKMNGEERA-ATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEG-----IQAEVTDMDWESTYFLRHLP--QSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHT 178          
The following BLAST results are available for this feature:
BLAST of FC869132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
G3O21_WHEAT1.878e-1529.32Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
ACCO_DIACA3.203e-1526.98Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_CUCME3.203e-1525.821-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
HY6H_HYONI7.136e-1526.32Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO1_DORSP7.136e-1527.571-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO_PERAE9.320e-1526.061-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
G3OX3_ARATH1.217e-1426.80Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
ACCO2_DORSP2.076e-1427.571-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
LDOX_MAIZE3.542e-1421.90Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
ACCO_DIOKA4.626e-1424.731-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]

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Properties
Property NameValue
Genbank descriptionC31008H03EF AbioticL1 Citrus clementina cDNA clone C31008H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869132 ID=FC869132; Name=FC869132; organism=Citrus clementina; type=EST; length=691bp
AGGAACAAAAGATGGTCCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTT
CAAGAGTTGGTCAAGAATCCGGCGTTAGTTGTCCCCGACAGATACATACG
TCCAGATCAAGATTCACCCCTCATTTCTGATGATACTTTGATTTCACAGA
TACCAGTTATTGACATGCAAAGCTTACATTCTGAAGAATCAATGGATTCT
GAGTTAGCCAAGCTCGACTTCGTATGCAAAGAATGGGGTTTTTTCCAGCT
GGTAAATCATGGAATGAGCACAGCATTTCTAGAGAAATTAAAGAAAGAGG
TTGAGGGATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAG
CGTCCAGGGGATATGGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGA
ACAAAAGCTTGATTGGGCTGACCTTTTCTCCATGATGACTCTTCCAGTTC
ATCTGAGGAAACCACATTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAG
ACCTTGGAAGTTTACTCAATGGAATTAAAAACCCTAGCCGAGAACCTAAT
ATCGAAAATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATGAGAGAAT
TCTTTGAAAATGGNACTGCAGGAATGAGGATGAATTATTACCCTCCATGT
CCTCAGCCCGAGAAGGTTATGGGCCTGTCGCCGCATTCTGA
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