FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI15B_XENLA (Kinesin-like protein KIF15-B OS=Xenopus laevis GN=kif15-B PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.288e-16
Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL----RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            S+L +VDL GSER   T   G  L E  +IN SLS L  VI AL      ++ H+ YR+SKLT +LRDSLG  +K  ++ +  P  +  GET+ +L FA+RA+ I++   ++ED
Sbjct:  260 SQLNLVDLAGSERQKDTQTEGVRLKEAGSINRSLSCLGQVITALVDVANGRQRHICYRDSKLTFLLRDSLGGNAKTFIIANVHPGSKCFGETLSTLQFAQRAKLIKNKAVVNED 373          

HSP 2 Score: 23.8682 bits (50), Expect = 1.288e-16
Identity = 15/46 (32.61%), Postives = 22/46 (47.83%), Query Frame = 1
Query:    7 KGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            K  V + G  E  +    +A    + G R R  + T++N  SSRSH
Sbjct:  193 KKGVFVVGAVEQVVTSAAEAYQVLSMGWRNRRVASTSMNRESSRSH 238          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF12_MOUSE (Kinesin-like protein KIF12 OS=Mus musculus GN=Kif12 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.309e-16
Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI 521
            KL  VDL GSE+V  TG+ GQ + E  +IN SL AL   I+ L   +RK+ H+P+R+SKLT++L DSLG     LM+   SP  + + ET+ +L +A RA+ I
Sbjct:  258 KLCFVDLAGSEKVAATGSQGQLMLEANSINRSLLALGHCISLLLDPQRKQNHIPFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASRAQRI 360          

HSP 2 Score: 23.483 bits (49), Expect = 1.309e-16
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1
Query:   91 RVRSTSWTNVNEASSRSHCFIYL 159
            R RS+S T +N+ASSRSH  + L
Sbjct:  214 RRRSSSHT-LNQASSRSHALLTL 235          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIFC1_CRIGR (Kinesin-like protein KIFC1 OS=Cricetulus griseus PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.562e-16
Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGAT-----GQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKR 509
            V+ L +VDL GSER L  G T        L E ++IN SLS L  VI AL  K  HVPYRNSKLT +L++SLG  +K+LM V+ SP EE+V E++ SL FA +
Sbjct:  507 VAPLNLVDLAGSER-LDPGLTLGPGERDRLRETQSINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASK 608          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: CUT7_SCHPO (Kinesin-like protein cut7 OS=Schizosaccharomyces pombe GN=cut7 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 1.562e-16
Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  171 ITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            +TI  + D L      SKL MVDL GSE + ++GA  +   E   IN SL  L  VI AL  K  H+PYR SKLT++L+DSLG  +K  M+V  S    ++ ETI +L +A RA+ I +
Sbjct:  308 LTINNNSDDL---LRASKLHMVDLAGSENIGRSGAENKRARETGMINQSLLTLGRVINALVEKAHHIPYRESKLTRLLQDSLGGKTKTSMIVTVSSTNTNLEETISTLEYAARAKSIRN 423          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF24_MOUSE (Kinesin-like protein KIF24 OS=Mus musculus GN=Kif24 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.675e-16
Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 3
Query:  204 AKTEVSKLWMVDLGGSERVLKT-GATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIE 524
            AK    ++  +DL GSER      +  QT  EG  IN SL AL + I AL ++  H P+R SKLTQ+L+DS    +K  M+ + SP       T+ +L +A R + ++
Sbjct:  435 AKRTFGRISFIDLAGSERAADARDSDRQTKMEGAEINQSLLALKECIRALDQEHTHTPFRQSKLTQVLKDSFIGNAKTCMIANISPSHIATEHTLNTLRYADRVKELK 542          

HSP 2 Score: 38.5058 bits (88), Expect = 1.675e-16
Identity = 22/53 (41.51%), Postives = 28/53 (52.83%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYL 159
            D+K  V+I GL E+Q+           KG + RST  T VN  SSRSH  I +
Sbjct:  377 DSKHVVQIAGLRELQVDSVELLLQVILKGSKERSTGATGVNADSSRSHAIIQI 429          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIP1_YEAST (Kinesin-like protein KIP1 OS=Saccharomyces cerevisiae GN=KIP1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.040e-16
Identity = 45/115 (39.13%), Postives = 70/115 (60.87%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKK 557
            ++ KL +VDL GSE + ++GA  +   E   IN SL  L  VI AL     H+PYR SKLT++L+DSLG  +K  ++   SP +  + ET  +L +A RA+ I++  ++++ L K
Sbjct:  308 KIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSK 422          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIFC1_RAT (Kinesin-like protein KIFC1 OS=Rattus norvegicus GN=Kifc1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.040e-16
Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 3
Query:  231 MVDLGGSERVLKTGAT-----GQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKR 509
            +VDL GSER L  G T        L E +AIN SLS L  VI AL  K  HVPYRNSKLT +L++SLG  +K+LM V+ SP EE+V E++ SL FA +
Sbjct:  583 LVDLAGSER-LDPGLTLGPGERDRLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASK 679          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF25_HUMAN (Kinesin-like protein KIF25 OS=Homo sapiens GN=KIF25 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.040e-16
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIE 524
            ++L +VD  GSE V  +G TG  L E   I+ SL+ALA V+ AL   RGH PYRNS+LT +L+D LG  +K+L+++  SP +  + +T+  L F  RAR ++
Sbjct:  263 ARLQLVDSAGSECVGVSGVTGLALREMACISRSLAALAGVLGALLEHRGHAPYRNSRLTHLLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIRARQVQ 364          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI15A_XENLA (Kinesin-like protein KIF15-A OS=Xenopus laevis GN=kif15-A PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.176e-16
Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL----RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            S+L +VDL GSER   T   G  L E  +IN SLS L  VI AL      ++ H+ YR+SKLT +LRDSLG  +K   + +  P  +  GET+ +L FA+RA+ I++   ++ED
Sbjct:  260 SQLNLVDLAGSERQKDTQTEGVRLKEAGSINRSLSCLGQVITALVDVANGRQRHICYRDSKLTFLLRDSLGGNAKTFYIANVHPGSKCFGETLSTLQFAQRAKLIKNKAVVNED 373          

HSP 2 Score: 23.8682 bits (50), Expect = 2.176e-16
Identity = 15/46 (32.61%), Postives = 22/46 (47.83%), Query Frame = 1
Query:    7 KGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            K  V + G  E  +    +A    + G R R  + T++N  SSRSH
Sbjct:  193 KKGVFVVGAVEQVVTSAAEAYQVLSMGWRNRRVASTSMNRESSRSH 238          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KLP5_SCHPO (Kinesin-like protein 5 OS=Schizosaccharomyces pombe GN=klp5 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.197e-16
Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL--RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES---------NRELSEDLKKRXEIR 572
            ++ L ++DL GSER   T   G  L EG  IN SL AL + I AL    +R HVPYR+SKLT++L+ SLG   + +M+V  SP      ET  +L +A RA+ I++         +R +S+ +K   E+R
Sbjct:  287 LATLSIIDLAGSERATATKLRGSRLFEGANINKSLLALGNCINALCDPHRRAHVPYRDSKLTRLLKFSLGGNCRTVMIVCVSPSSVHYEETHNTLKYANRAKNIKTEVLRNMISVDRHVSQYVKAIVELR 416          

HSP 2 Score: 27.7202 bits (60), Expect = 2.197e-16
Identity = 17/51 (33.33%), Postives = 23/51 (45.10%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            DA   + + GLT +      +      KG   R+ S T  N ASSRSH  +
Sbjct:  218 DADRRITVPGLTSLSPESLEEIIDIIMKGNANRTMSPTEANAASSRSHAVL 268          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KI15B_XENLA1.288e-1642.98Kinesin-like protein KIF15-B OS=Xenopus laevis GN=... [more]
KIF12_MOUSE1.309e-1645.63Kinesin-like protein KIF12 OS=Mus musculus GN=Kif1... [more]
KIFC1_CRIGR1.562e-1651.46Kinesin-like protein KIFC1 OS=Cricetulus griseus P... [more]
CUT7_SCHPO1.562e-1643.70Kinesin-like protein cut7 OS=Schizosaccharomyces p... [more]
KIF24_MOUSE1.675e-1637.04Kinesin-like protein KIF24 OS=Mus musculus GN=Kif2... [more]
KIP1_YEAST2.040e-1639.13Kinesin-like protein KIP1 OS=Saccharomyces cerevis... [more]
KIFC1_RAT2.040e-1653.06Kinesin-like protein KIFC1 OS=Rattus norvegicus GN... [more]
KIF25_HUMAN2.040e-1644.12Kinesin-like protein KIF25 OS=Homo sapiens GN=KIF2... [more]
KI15A_XENLA2.176e-1642.98Kinesin-like protein KIF15-A OS=Xenopus laevis GN=... [more]
KLP5_SCHPO2.197e-1639.23Kinesin-like protein 5 OS=Schizosaccharomyces pomb... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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