FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KAR3_YEAST (Kinesin-like protein KAR3 OS=Saccharomyces cerevisiae GN=KAR3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.063e-15
Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  231 MVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRK---RGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKR 509
            +VDL GSER+  +   G  L E + IN SLS L DVI AL +    + H+P+RNSKLT +L+ SL   SK LM V+ SP    + ET+ SL FA +
Sbjct:  624 LVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASK 719          

HSP 2 Score: 26.5646 bits (57), Expect = 1.063e-15
Identity = 15/44 (34.09%), Postives = 21/44 (47.73%), Query Frame = 1
Query:   13 TVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            T  I  +T  ++           K  ++RST+ T  NE SSRSH
Sbjct:  557 TTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSRSH 600          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF12_HUMAN (Kinesin-like protein KIF12 OS=Homo sapiens GN=KIF12 PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.066e-15
Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI 521
            KL  VDL GSE+V  TG+ G+ + E  +IN SL AL   I+ L   +RK+ H+P+R+SKLT++L DSLG     LM+   SP  + + ET+ +L +A RA+ +
Sbjct:  258 KLCFVDLAGSEKVAATGSRGELMLEANSINRSLLALGHCISLLLDPQRKQSHIPFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASRAQRV 360          

HSP 2 Score: 21.9422 bits (45), Expect = 1.066e-15
Identity = 10/21 (47.62%), Postives = 13/21 (61.90%), Query Frame = 1
Query:   97 RSTSWTNVNEASSRSHCFIYL 159
            R  S   +N+ASSRSH  + L
Sbjct:  215 RRNSAHTLNQASSRSHALLTL 235          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF22_DANRE (Kinesin-like protein KIF22 OS=Danio rerio GN=kif22 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.066e-15
Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 3
Query:  207 KTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRG-HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI 521
            + +  KL++VDL GSE   +TG  G  L E  AINLSL  L+ V+ AL    G  VPYR+SKLT++L+DSLG  +  +M+ + +P  +   +T  +L+FA +++ I
Sbjct:  240 RQQTGKLYLVDLAGSEDNRRTGNQGIRLKESGAINLSLFTLSKVVDALNTGAGGRVPYRDSKLTRLLQDSLGGSAHSVMITNIAPEYKYYFDTFSALNFAAKSKQI 345          

HSP 2 Score: 27.7202 bits (60), Expect = 1.066e-15
Identity = 15/53 (28.30%), Postives = 24/53 (45.28%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYL 159
            D    + I GLT   +  F      +      R+T+ T +N+ SSRSH  + +
Sbjct:  176 DKDRNILIPGLTHTPLSSFADFDTHFIPASLNRTTASTKLNQRSSRSHAILLI 228          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI18B_RAT (Kinesin-like protein KIF18B OS=Rattus norvegicus GN=Kif18b PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.727e-15
Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRG---HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI 521
            V+K+ ++DL GSER   T A G+ L EG  IN SL AL +V+ AL   +G   HVPYR+SKLT++L+DS+G   + +M+   SP      +T  +L +A RA+ I
Sbjct:  249 VAKMSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNCRTVMIAAVSPSSLTYEDTYNTLKYADRAKEI 353          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI18B_MOUSE (Kinesin-like protein KIF18B OS=Mus musculus GN=Kif18b PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.256e-15
Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRG---HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI 521
            V+K+ ++DL GSER   T A G+ L EG  IN SL AL +V+ AL   +G   HVPYR+SKLT++L+DS+G   + +M+   SP      +T  +L +A RA+ I
Sbjct:  249 VAKMSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNCRTVMIAAISPSSLTYEDTYNTLKYADRAKEI 353          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF10_DICDI (Kinesin-related protein 10 OS=Dictyostelium discoideum GN=kif10 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.305e-15
Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR------------KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            ++++IT+ +     ++K    KL ++DL GSER  KT  TG  L EG +IN SL AL + I AL                  +PYR+SKLT+IL+DSL    K +M+ + SP      ET  +L +A+RA+ I++
Sbjct:  242 AVLQITVKQQNLQDKSKISFGKLSLIDLAGSERASKTLNTGDRLKEGTSINKSLLALGNCIKALGELCKNQQSQQQSSNPNFIPYRDSKLTRILKDSLTGSCKTIMIANISPNSSSFEETHNTLKYAQRAKSIKT 376          

HSP 2 Score: 21.9422 bits (45), Expect = 2.305e-15
Identity = 10/25 (40.00%), Postives = 13/25 (52.00%), Query Frame = 1
Query:   85 GRRVRSTSWTNVNEASSRSHCFIYL 159
            G   R  S T  N+ SSRSH  + +
Sbjct:  222 GNLNRKQSPTQTNQTSSRSHAVLQI 246          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KLP6_SCHPO (Kinesin-like protein 6 OS=Schizosaccharomyces pombe GN=klp6 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.328e-15
Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 3
Query:  234 VDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL--RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES---------NRELSEDLKKRXEIR 572
            +DL GSER   T   G+ L EG  IN SL AL + I +L   R+R HVPYR+SKLT++L+ SLG   +  M+V  SP  E   ET  +L +  RA+ I++         +R +SE ++   E+R
Sbjct:  292 IDLAGSERASATKNRGKRLVEGANINRSLLALGNCINSLCEPRRRQHVPYRDSKLTRLLKFSLGGNCRTCMIVCISPSSEHYDETHNTLKYGNRAKNIKTKVSRNVVSVDRHVSEYVRTIYELR 415          

HSP 2 Score: 25.409 bits (54), Expect = 2.328e-15
Identity = 15/53 (28.30%), Postives = 24/53 (45.28%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYL 159
            DA+  V + GL+     +  +      +G   R+ S T  N  SSRSH  + +
Sbjct:  210 DAEQNVSVPGLSYFTPTNLEEVMEIIIRGNSNRTMSPTEANAVSSRSHAVLQI 262          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: DSK1_CYLFU (Diatom spindle kinesin 1 OS=Cylindrotheca fusiformis GN=DSK1 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.340e-15
Identity = 42/99 (42.42%), Postives = 52/99 (52.53%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGA-TGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRAR 515
            KL +VDL GSER   T     Q   E   IN SL AL + I AL +K  HVPYR SKLT IL+D     SK  M+   SP       ++ +L +A R +
Sbjct:  311 KLGLVDLAGSERGSDTKQHNSQRRTESADINTSLLALKECIRALGQKSAHVPYRGSKLTLILKDCFSPDSKTTMVATVSPGASAADHSLNTLRYADRIK 409          

HSP 2 Score: 36.965 bits (84), Expect = 2.340e-15
Identity = 22/55 (40.00%), Postives = 28/55 (50.91%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH--CFIYL 159
            D  G V I GL EV  P          +G  +R+T  T  N+ASSRSH  C ++L
Sbjct:  247 DGNGEVNITGLREVPAPTPEAFLQVIEEGHSLRTTQKTEANDASSRSHAICQVFL 301          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: CENPE_MOUSE (Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.836e-15
Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 3
Query:  201 EAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR--RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSE 545
            +   +VS L +VDL GSER  +TGA G  L EG  IN +L  L  VI  L   +  G + YR+SKLT+IL++SLG  +K  ++   +P   D  ET+ +L FA  A+ +++   ++E
Sbjct:  223 DGSVKVSHLNLVDLAGSERAAQTGAEGVRLKEGCFINRNLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPASLD--ETLTTLQFASTAKYMKNTPYVNE 337          

HSP 2 Score: 30.0314 bits (66), Expect = 3.836e-15
Identity = 17/48 (35.42%), Postives = 22/48 (45.83%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            D   TV +  LTE  +     A  W   G + R    T +N+ SSRSH
Sbjct:  157 DTNRTVYVSDLTEEVVYTAEMALKWLATGEKNRHYGITKMNQRSSRSH 204          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIP3_YEAST (Kinesin-like protein KIP3 OS=Saccharomyces cerevisiae GN=KIP3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.929e-15
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 3
Query:  198 LEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRG----HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            L ++   + L ++DL GSER   T   G  L EG  IN SL AL + I AL    G    H+PYR+SKLT++L+ SLG   K +M+V  SP      ET+ +L +A RA+ I++
Sbjct:  327 LTSQHTFATLSIIDLAGSERAAATRNRGIRLHEGANINRSLLALGNCINALCLNDGSRSCHIPYRDSKLTRLLKFSLGGNCKTVMIVCISPSSSHYDETLNTLKYANRAKEIKT 440          

HSP 2 Score: 25.7942 bits (55), Expect = 3.929e-15
Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 1
Query:   82 KGRRVRSTSWTNVNEASSRSHCFIYL 159
            +G   R+TS T  NE SSRSH  + +
Sbjct:  291 QGNINRTTSPTEANEVSSRSHAVLQI 316          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KAR3_YEAST1.063e-1546.88Kinesin-like protein KAR3 OS=Saccharomyces cerevis... [more]
KIF12_HUMAN1.066e-1543.69Kinesin-like protein KIF12 OS=Homo sapiens GN=KIF1... [more]
KIF22_DANRE1.066e-1541.51Kinesin-like protein KIF22 OS=Danio rerio GN=kif22... [more]
KI18B_RAT1.727e-1543.81Kinesin-like protein KIF18B OS=Rattus norvegicus G... [more]
KI18B_MOUSE2.256e-1543.81Kinesin-like protein KIF18B OS=Mus musculus GN=Kif... [more]
KIF10_DICDI2.305e-1537.04Kinesin-related protein 10 OS=Dictyostelium discoi... [more]
KLP6_SCHPO2.328e-1540.32Kinesin-like protein 6 OS=Schizosaccharomyces pomb... [more]
DSK1_CYLFU2.340e-1542.42Diatom spindle kinesin 1 OS=Cylindrotheca fusiform... [more]
CENPE_MOUSE3.836e-1539.32Centromere-associated protein E OS=Mus musculus GN... [more]
KIP3_YEAST3.929e-1541.23Kinesin-like protein KIP3 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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