FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF12_DICDI (Kinesin-related protein 12 OS=Dictyostelium discoideum GN=kif12 PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.503e-12
Identity = 41/130 (31.54%), Postives = 61/130 (46.92%), Query Frame = 3
Query:  192 DALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRK--------------------RGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI 521
            D   ++   SKL ++DL GSER  +T  TG+T  EG +IN SL  L   I  L+++                       +P+R S LT+I ++      K  M+V+ SP   D  ET+  L F+  A+ I
Sbjct:  441 DIHPSQIRCSKLCIIDLAGSERASRTETTGETFKEGSSINTSLFTLGKCIEGLKQQALQQQQQQQQHSSKRQSIHHSNPIPWRESDLTRICQEYFCGNGKASMIVNVSPSSCDSEETLNVLRFSASAKEI 570          

HSP 2 Score: 30.4166 bits (67), Expect = 4.503e-12
Identity = 16/46 (34.78%), Postives = 22/46 (47.83%), Query Frame = 1
Query:   16 VEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            V I+GL E+ +     AR    +G   R    T +N  SSRSH  +
Sbjct:  381 VNIKGLKEILVSSVEDARDIVEQGESNRKVGGTKLNATSSRSHAVL 426          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF2B_BOVIN (Kinesin-like protein KIF2B OS=Bos taurus GN=KIF2B PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.964e-12
Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGATGQTLD-EGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDS-LGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESN 530
            K  +VDL G+ER   T    +    EG  IN SL AL + I AL + + H P+R SKLTQ+LRDS +G  S   M+   SP       T+ +L +A R + I  N
Sbjct:  442 KFSLVDLAGNERGADTAKANRKRQLEGAEINKSLLALKECIRALGQNKSHTPFRASKLTQVLRDSFIGQNSSTCMIATISPGMASCENTLNTLRYANRVKEITLN 546          

HSP 2 Score: 24.6386 bits (52), Expect = 5.964e-12
Identity = 14/48 (29.17%), Postives = 22/48 (45.83%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            D    +++ GL E ++            G   R++  T+VN  SSRSH
Sbjct:  379 DGSQQIQVVGLQEQEVCCVEDMLNLVELGNSCRTSGQTSVNAHSSRSH 426          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: NOD_DROME (Kinesin-like protein Nod OS=Drosophila melanogaster GN=nod PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.968e-12
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 3
Query:  198 LEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESN 530
            +++KT  S++ +VDL GSE V +TG  G    EG  INL L ++  V+ ++      +PYR+S LT +L+ SL   S +  L   SP + D+ ET+ +L F   A+ +  N
Sbjct:  213 VKSKTHHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLN 323          

HSP 2 Score: 23.8682 bits (50), Expect = 5.968e-12
Identity = 11/23 (47.83%), Postives = 13/23 (56.52%), Query Frame = 1
Query:   85 GRRVRSTSWTNVNEASSRSHCFI 153
            G R R    TN+N  SSRSH  +
Sbjct:  187 GTRNRRVRPTNMNSNSSRSHAIV 209          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIP2_ASHGO (Kinesin-like protein KIP2 OS=Ashbya gossypii GN=KIP2 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 7.743e-12
Identity = 48/144 (33.33%), Postives = 65/144 (45.14%), Query Frame = 3
Query:  150 HISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR------------KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSE 545
            H   L+R+T +   D        S L + DL GSER +      +   EG  IN SL AL  VIA L                GH+PYR+SKLT+IL+ +L   S +  +       E   ET  ++ FA RA+ I  N   +E
Sbjct:  317 HAIVLLRLTRY---DLKTGSEATSTLSLCDLAGSERAVTQIVRRK---EGAFINKSLLALGTVIAKLSMLGSQANGLQPSPAAGHIPYRDSKLTRILQPALTGDSIITTICTIDSKAESSTETTNTVRFASRAKNIALNVRKNE 454          

HSP 2 Score: 34.2686 bits (77), Expect = 7.743e-12
Identity = 19/53 (35.85%), Postives = 25/53 (47.17%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYL 159
            D+K  V++  LTE  +        W   G R R T  T+ N  SSRSH  + L
Sbjct:  270 DSKYGVKVVDLTEQLVSSHEDVMKWIATGDRNRKTGETDFNTRSSRSHAIVLL 322          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: TEA2_SCHPO (Kinesin-like protein tea2 OS=Schizosaccharomyces pombe GN=tea2 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.008e-11
Identity = 44/137 (32.12%), Postives = 70/137 (51.09%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIA--------ALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSE 545
            +++++ + R+       +++S L +VDL GSER     A  +   EG  IN SL  L  VI+        +L    GH+PYR SKLT++L+ SL   S++ +L   S       ET  +L FA RA+ +  +   +E
Sbjct:  336 AILQVFLIRNNPTAHT-SQISSLSLVDLAGSERA---SAHHERRKEGAFINKSLLTLGTVISRLSAAANPSLTSNSGHIPYRESKLTRLLQQSLSGQSQISLLATISIESNHTMETTNTLKFASRAQNLPQDIRQAE 468          

HSP 2 Score: 27.335 bits (59), Expect = 1.008e-11
Identity = 15/51 (29.41%), Postives = 24/51 (47.06%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            +A G V +  LT V +    +      +   +R T+ T+ N  SSRSH  +
Sbjct:  288 NASGEVNVTPLTRVLVTSPEEVSQVIEQCNAIRKTAATDFNTYSSRSHAIL 338          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF2C_MACFA (Kinesin-like protein KIF2C OS=Macaca fascicularis GN=KIF2C PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTG-ATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDS-LGDGSKVLMLVHASPCEEDVGETICSLSFAKRAR 515
            K  +VDL G+ER   T  A  QT  EG  IN SL AL + I AL + + H P+R SKLTQ+LRDS +G+ S+  M+   SP       T+ +L +A R +
Sbjct:  433 KFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVK 532          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF2C_HUMAN (Kinesin-like protein KIF2C OS=Homo sapiens GN=KIF2C PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTG-ATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDS-LGDGSKVLMLVHASPCEEDVGETICSLSFAKRAR 515
            K  +VDL G+ER   T  A  QT  EG  IN SL AL + I AL + + H P+R SKLTQ+LRDS +G+ S+  M+   SP       T+ +L +A R +
Sbjct:  487 KFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVK 586          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF2B_MACFA (Kinesin-like protein KIF2B OS=Macaca fascicularis GN=KIF2B PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 3.707e-11
Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGATGQTLD-EGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDS-LGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESN 530
            K  +VDL G+ER   T    +    EG  IN SL AL + I AL + + H P+R SKLTQ+LRDS +G  S   M+   SP       T+ +L +A R + + ++
Sbjct:  439 KFSLVDLAGNERGADTTKASRKRQLEGAEINKSLLALKECILALGQNKPHTPFRASKLTQVLRDSFIGRNSSTCMIATISPGMTSCENTLNTLRYANRVKELNAD 543          

HSP 2 Score: 25.409 bits (54), Expect = 3.707e-11
Identity = 14/48 (29.17%), Postives = 23/48 (47.92%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            D    +++ GL E ++    +       G   R++  T+VN  SSRSH
Sbjct:  376 DGNQQIQVVGLQEQEVCCVEEVLNLVELGNSCRTSRQTSVNAHSSRSH 423          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI20A_MOUSE (Kinesin-like protein KIF20A OS=Mus musculus GN=Kif20a PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 8.039e-11
Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR------KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRA 512
            ++S+L + DL GSER  K   +G+ L E   IN SL  L   IAALR+      K+  +P+R+SKLT++ +       +  M+V+ +PC     ET+ +  F+  A
Sbjct:  399 KISELSLCDLAGSERC-KHQKSGERLKEAGNINTSLHTLGRCIAALRQNQQNRSKQNLIPFRDSKLTRVFQGFFTGRGRSCMIVNVNPCASTYDETLHAAKFSALA 503          

HSP 2 Score: 28.8758 bits (63), Expect = 8.039e-11
Identity = 15/48 (31.25%), Postives = 26/48 (54.17%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            D  G   ++ L  + + D  +A      GR+ +S + T++N+ SSRSH
Sbjct:  333 DQNGNPYVKDLNWIHVRDVEEAWKLLKVGRKNQSFASTHMNQQSSRSH 380          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF12_DICDI4.503e-1231.54Kinesin-related protein 12 OS=Dictyostelium discoi... [more]
KIF2B_BOVIN5.964e-1240.00Kinesin-like protein KIF2B OS=Bos taurus GN=KIF2B ... [more]
NOD_DROME5.968e-1236.04Kinesin-like protein Nod OS=Drosophila melanogaste... [more]
KIP2_ASHGO7.743e-1233.33Kinesin-like protein KIP2 OS=Ashbya gossypii GN=KI... [more]
TEA2_SCHPO1.008e-1132.12Kinesin-like protein tea2 OS=Schizosaccharomyces p... [more]
KIF2C_MACFA1.513e-1143.00Kinesin-like protein KIF2C OS=Macaca fascicularis ... [more]
KIF2C_HUMAN1.513e-1143.00Kinesin-like protein KIF2C OS=Homo sapiens GN=KIF2... [more]
KIF2B_MACFA3.707e-1138.10Kinesin-like protein KIF2B OS=Macaca fascicularis ... [more]
KI20A_MOUSE8.039e-1134.91Kinesin-like protein KIF20A OS=Mus musculus GN=Kif... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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