FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF17_MOUSE (Kinesin-like protein KIF17 OS=Mus musculus GN=Kif17 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.551e-23
Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = 3
Query:  150 HISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKR-GHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            H    + I I+   +  +      KL +VDL GSER  KTGATG+ L E   INLSLSAL +VI+AL   R  H+PYR+SKLT++L+DSLG  +K LM+   SP + +  ET+ +L +A RA+ I++   ++ED K
Sbjct:  211 HSIFTINIEIYAVDERGKDHLRAGKLNLVDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDGRCKHIPYRDSKLTRLLQDSLGGNTKTLMVACLSPADNNYDETLSTLRYANRAKNIKNKPRINEDPK 346          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KINH_LOLPE (Kinesin heavy chain OS=Loligo pealeii PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.958e-23
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR-RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NRELSEDLKKR 560
            KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL    + HVPYR+SKLT+IL++SLG  ++  M++  SP   +  ET  +L F +RA+ I++    N EL+ D  KR
Sbjct:  226 KLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALADGNKSHVPYRDSKLTRILQESLGGNARTTMVICCSPASYNESETKSTLLFGQRAKTIKNVVSVNEELTADEWKR 343          

HSP 2 Score: 26.9498 bits (58), Expect = 8.958e-23
Identity = 14/41 (34.15%), Postives = 23/41 (56.10%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++G TE  +    +     ++G+  R  + TN+NE SSRSH
Sbjct:  165 VKGATERFVSSPEEVMEVIDEGKNNRHVAVTNMNEHSSRSH 205          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI21B_MOUSE (Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.956e-22
Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 3
Query:  201 EAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            E +T  +K   VDL GSER+ +TGATG+   EG +IN  L AL +VI+AL    +K  HVPYR+SKLT++L+DSLG  S+ +M+   SP + D  ET+ +L +A RAR I++   +++D
Sbjct:  262 EYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVVVNQD 380          

HSP 2 Score: 25.7942 bits (55), Expect = 1.956e-22
Identity = 16/48 (33.33%), Postives = 23/48 (47.92%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            DA G +   G+T   I    +      +G   R+T+ T +N  SSRSH
Sbjct:  179 DANGGIYTTGVTSRLINSQEELIQCLKQGALSRTTASTQMNVQSSRSH 226          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI21B_HUMAN (Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.956e-22
Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 3
Query:  201 EAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            E +T  +K   VDL GSER+ +TGATG+   EG +IN  L AL +VI+AL    +K  HVPYR+SKLT++L+DSLG  S+ +M+   SP + D  ET+ +L +A RAR I++   +++D
Sbjct:  261 EYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVVVNQD 379          

HSP 2 Score: 25.7942 bits (55), Expect = 1.956e-22
Identity = 16/48 (33.33%), Postives = 23/48 (47.92%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            DA G +   G+T   I    +      +G   R+T+ T +N  SSRSH
Sbjct:  179 DANGGIYTTGVTSRLIHSQEELIQCLKQGALSRTTASTQMNVQSSRSH 226          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI13B_HUMAN (Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.540e-22
Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKKR 560
            +V KL +VDL GSER  KTGA G  L EG  IN SL+ L  VI+AL      + K   VPYR+S LT +L+DSLG  SK  M+   SP  ++  ET+ +L +A RA+ I +N  ++ED   R
Sbjct:  245 KVGKLSLVDLAGSERATKTGAAGDRLKEGSNINESLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKHIVNNAVVNEDPNAR 366          

HSP 2 Score: 31.187 bits (69), Expect = 2.540e-22
Identity = 13/44 (29.55%), Postives = 26/44 (59.09%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            ++GL+++    +       ++G + R+ + TN+NE SSRSH  +
Sbjct:  183 VDGLSKLAATSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVL 226          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIFC2_MOUSE (Kinesin-like protein KIFC2 OS=Mus musculus GN=Kifc2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.350e-22
Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 3
Query:  225 LWMVDLGGSERVLKTGATG---------QTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIE 524
            L +VDL GSERV K G            + L E +AIN SL AL  V+AALR +R HVP+R+S+LT++L+ +L  G+  ++L+  S   ED+GETICSL FA+R   +E
Sbjct:  625 LHLVDLAGSERVWKAGVASPVQRDPNGARRLREAQAINRSLLALGGVMAALRARRPHVPFRDSQLTRLLQPALWAGTTAVLLLQISTRAEDLGETICSLKFAERVGQVE 733          

HSP 2 Score: 36.1946 bits (82), Expect = 3.350e-22
Identity = 17/51 (33.33%), Postives = 29/51 (56.86%), Query Frame = 1
Query:    7 KGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYL 159
            +G +++ GLT   +P+        + GR  R+T+ T +N+ SSRSH  + L
Sbjct:  558 QGGIQVAGLTHWDVPNLETLHQMLSLGRSNRATAATVMNQHSSRSHALVTL 608          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3_DICDI (Kinesin-related protein 3 OS=Dictyostelium discoideum GN=kif3 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.543e-22
Identity = 51/113 (45.13%), Postives = 80/113 (70.80%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            +  KL++VDL GSE++ KTGA G TLDE + IN SLS+L +VI AL   K  H+PYR+SKLT++L++SLG  S+  ++++ SP   +  ETI +L F  RA+ I++  +++++
Sbjct:  226 KTGKLYLVDLAGSEKISKTGAQGTTLDEAKMINKSLSSLGNVINALTDGKSTHIPYRDSKLTRVLQESLGGNSRTTLIINCSPSSYNEAETISTLRFGSRAKNIKNKAKINQE 338          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF7_HUMAN (Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 7.239e-22
Identity = 55/107 (51.40%), Postives = 75/107 (70.09%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            VSK   VDL GSERVLKTG+TG+ L E   IN SL AL +VI+AL   +R+  H+PYR+SK+T+IL+DSLG  +K +M+   SP   D  ET+ +L++A RA+ I +
Sbjct:  245 VSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASRAQNIRN 351          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI21A_HUMAN (Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 9.477e-22
Identity = 54/119 (45.38%), Postives = 80/119 (67.23%), Query Frame = 3
Query:  201 EAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            E +T  +K   VDL GSER+ +TGATG+   EG +IN  L AL +VI+AL    ++  HVPYR+SKLT++L+DSLG  S+ +M+   SP + D  ET+ +L +A RAR I++   +++D
Sbjct:  262 EFETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDKSKRATHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVMVNQD 380          

HSP 2 Score: 23.483 bits (49), Expect = 9.477e-22
Identity = 14/48 (29.17%), Postives = 23/48 (47.92%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            D+ G +   G+T   +   ++       G   R+T+ T +N  SSRSH
Sbjct:  180 DSTGGIYTVGVTTRTVNTESEMMQCLKLGALSRTTASTQMNVQSSRSH 227          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI13A_MOUSE (Kinesin-like protein KIF13A OS=Mus musculus GN=Kif13a PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.232e-21
Identity = 52/118 (44.07%), Postives = 76/118 (64.41%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            +VSK+ +VDL GSERV KTGA G+ L EG  IN SL+ L  VI++L      + K   VPYR+S LT +L+D+LG  S+  M+   SP  ++  ET+ +L +A RA+ I ++  ++ED
Sbjct:  244 KVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNED 361          

HSP 2 Score: 33.8834 bits (76), Expect = 1.232e-21
Identity = 14/41 (34.15%), Postives = 26/41 (63.41%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++GL+++ +  F       ++G + R+ + TN+NE SSRSH
Sbjct:  182 VDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSH 222          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF17_MOUSE8.551e-2344.85Kinesin-like protein KIF17 OS=Mus musculus GN=Kif1... [more]
KINH_LOLPE8.958e-2349.15Kinesin heavy chain OS=Loligo pealeii PE=2 SV=1[more]
KI21B_MOUSE1.956e-2246.22Kinesin-like protein KIF21B OS=Mus musculus GN=Kif... [more]
KI21B_HUMAN1.956e-2246.22Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF... [more]
KI13B_HUMAN2.540e-2245.90Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF... [more]
KIFC2_MOUSE3.350e-2246.79Kinesin-like protein KIFC2 OS=Mus musculus GN=Kifc... [more]
KIF3_DICDI5.543e-2245.13Kinesin-related protein 3 OS=Dictyostelium discoid... [more]
KIF7_HUMAN7.239e-2251.40Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 ... [more]
KI21A_HUMAN9.477e-2245.38Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF... [more]
KI13A_MOUSE1.232e-2144.07Kinesin-like protein KIF13A OS=Mus musculus GN=Kif... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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