FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KINH_RAT (Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5b PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.244e-21
Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            S+  I + +     E K    KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL     +VPYR+SK+T+IL+DSLG   +  +++  SP   +  ET  +L F +RA+ I++    N EL +E  KK+ E
Sbjct:  206 SIFLINVKQENTQTEQKLS-GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTIKNTVCVNVELTAEQWKKKYE 345          

HSP 2 Score: 25.7942 bits (55), Expect = 1.244e-21
Identity = 14/41 (34.15%), Postives = 23/41 (56.10%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++G TE  +    +     ++G+  R  + TN+NE SSRSH
Sbjct:  165 VKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSH 205          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KINH_MOUSE (Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.244e-21
Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            S+  I + +     E K    KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL     +VPYR+SK+T+IL+DSLG   +  +++  SP   +  ET  +L F +RA+ I++    N EL +E  KK+ E
Sbjct:  206 SIFLINVKQENTQTEQKLS-GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTIKNTVCVNVELTAEQWKKKYE 345          

HSP 2 Score: 25.7942 bits (55), Expect = 1.244e-21
Identity = 14/41 (34.15%), Postives = 23/41 (56.10%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++G TE  +    +     ++G+  R  + TN+NE SSRSH
Sbjct:  165 VKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSH 205          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KINH_HUMAN (Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.244e-21
Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            S+  I + +     E K    KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL     +VPYR+SK+T+IL+DSLG   +  +++  SP   +  ET  +L F +RA+ I++    N EL +E  KK+ E
Sbjct:  206 SIFLINVKQENTQTEQKLS-GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTIKNTVCVNVELTAEQWKKKYE 345          

HSP 2 Score: 25.7942 bits (55), Expect = 1.244e-21
Identity = 14/41 (34.15%), Postives = 23/41 (56.10%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++G TE  +    +     ++G+  R  + TN+NE SSRSH
Sbjct:  165 VKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSH 205          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI13A_HUMAN (Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.602e-21
Identity = 52/118 (44.07%), Postives = 76/118 (64.41%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            +VSK+ +VDL GSERV KTGA G+ L EG  IN SL+ L  VI++L      + K   VPYR+S LT +L+D+LG  S+  M+   SP  ++  ET+ +L +A RA+ I ++  ++ED
Sbjct:  244 KVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNED 361          

HSP 2 Score: 33.8834 bits (76), Expect = 1.602e-21
Identity = 14/41 (34.15%), Postives = 26/41 (63.41%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++GL+++ +  F       ++G + R+ + TN+NE SSRSH
Sbjct:  182 VDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSH 222          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI21A_MOUSE (Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.604e-21
Identity = 54/119 (45.38%), Postives = 80/119 (67.23%), Query Frame = 3
Query:  201 EAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            E +T  +K   VDL GSER+ +TGATG+   EG +IN  L AL +VI+AL    ++  HVPYR+SKLT++L+DSLG  S+ +M+   SP + D  ET+ +L +A RAR I++   +++D
Sbjct:  262 EFETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDKSKRATHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVMVNQD 380          

HSP 2 Score: 22.7126 bits (47), Expect = 1.604e-21
Identity = 14/48 (29.17%), Postives = 22/48 (45.83%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            D+ G +   G+T   +    +       G   R+T+ T +N  SSRSH
Sbjct:  180 DSTGGIYTVGVTTRTVNTEPEMMQCLKLGALSRTTASTQMNVQSSRSH 227          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KINH_DROME (Kinesin heavy chain OS=Drosophila melanogaster GN=Khc PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.618e-21
Identity = 59/130 (45.38%), Postives = 89/130 (68.46%), Query Frame = 3
Query:  198 LEAKTEVS-KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR-RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            LE + ++S KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL    + H+PYR+SKLT+IL++SLG  ++  +++  SP   +  ET  +L F +RA+ +++    N EL +E+ K+R E
Sbjct:  224 LENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYE 353          

HSP 2 Score: 24.6386 bits (52), Expect = 1.618e-21
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 1
Query:   82 KGRRVRSTSWTNVNEASSRSH 144
            +G+  R  + TN+NE SSRSH
Sbjct:  192 EGKSNRHIAVTNMNEHSSRSH 212          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF5C_MOUSE (Kinesin heavy chain isoform 5C OS=Mus musculus GN=Kif5c PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.619e-21
Identity = 63/142 (44.37%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            S+  I I +     E K    KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL    + HVPYR+SK+T+IL+DSLG   +  +++  SP   +  ET  +L F +RA+ I++    N EL +E+ KK+ E
Sbjct:  207 SIFLINIKQENVETEKKLS-GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNLELTAEEWKKKYE 347          

HSP 2 Score: 26.1794 bits (56), Expect = 1.619e-21
Identity = 14/41 (34.15%), Postives = 23/41 (56.10%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++G TE  +    +     ++G+  R  + TN+NE SSRSH
Sbjct:  166 VKGCTERFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSH 206          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF5C_HUMAN (Kinesin heavy chain isoform 5C OS=Homo sapiens GN=KIF5C PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.619e-21
Identity = 63/142 (44.37%), Postives = 89/142 (62.68%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            S+  I I +     E K    KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL    + HVPYR+SK+T+IL+DSLG   +  +++  SP   +  ET  +L F +RA+ I++    N EL +E+ KK+ E
Sbjct:  207 SIFLINIKQENVETEKKLS-GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNLELTAEEWKKKYE 347          

HSP 2 Score: 26.1794 bits (56), Expect = 1.619e-21
Identity = 14/41 (34.15%), Postives = 23/41 (56.10%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++G TE  +    +     ++G+  R  + TN+NE SSRSH
Sbjct:  166 VKGCTERFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSH 206          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1A_DROPS (Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura GN=unc-104 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.713e-21
Identity = 55/132 (41.67%), Postives = 75/132 (56.82%), Query Frame = 3
Query:  183 RHGDALEAKTE-VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            RH    +  TE VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL          +K   +PYR+S LT +LR++LG  SK  M+   SP + +  ET+ +L +A RA+ I     ++ED
Sbjct:  229 RHDTMTDLTTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKHNKKADFIPYRDSALTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQIVCKAVVNED 360          

HSP 2 Score: 33.8834 bits (76), Expect = 2.713e-21
Identity = 14/41 (34.15%), Postives = 26/41 (63.41%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ + D+       ++G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTDYQDIHDLIDEGNKARTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1B_HUMAN (Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5)

HSP 1 Score: 89.7373 bits (221), Expect = 3.525e-21
Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 3
Query:  183 RHGDALEAKTE-VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            +H +     TE VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL            ++K   +PYR+S LT +LR++LG  S+  M+   SP + +  ET+ +L +A RA+ I+ N  ++ED
Sbjct:  229 KHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKCNAVINED 363          

HSP 2 Score: 32.7278 bits (73), Expect = 3.525e-21
Identity = 14/41 (34.15%), Postives = 25/41 (60.98%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ +  +T      + G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSH 218          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KINH_RAT1.244e-2143.26Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5... [more]
KINH_MOUSE1.244e-2143.26Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=... [more]
KINH_HUMAN1.244e-2143.26Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=... [more]
KI13A_HUMAN1.602e-2144.07Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF... [more]
KI21A_MOUSE1.604e-2145.38Kinesin-like protein KIF21A OS=Mus musculus GN=Kif... [more]
KINH_DROME1.618e-2145.38Kinesin heavy chain OS=Drosophila melanogaster GN=... [more]
KIF5C_MOUSE1.619e-2144.37Kinesin heavy chain isoform 5C OS=Mus musculus GN=... [more]
KIF5C_HUMAN1.619e-2144.37Kinesin heavy chain isoform 5C OS=Homo sapiens GN=... [more]
KIF1A_DROPS2.713e-2141.67Kinesin-like protein unc-104 OS=Drosophila pseudoo... [more]
KIF1B_HUMAN3.525e-2140.00Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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