FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KINH_STRPU (Kinesin heavy chain OS=Strongylocentrotus purpuratus PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.558e-21
Identity = 58/130 (44.62%), Postives = 89/130 (68.46%), Query Frame = 3
Query:  198 LEAKTEVS-KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR-RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            +E K ++S KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL   K+ H+PYR+SK+T+IL++SLG  ++  +++  SP   +  E+  +L F +RA+ I++    N EL +E+ + R E
Sbjct:  216 METKKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGKKSHIPYRDSKMTRILQESLGGNARTTIVICCSPSSFNESESKSTLMFGQRAKTIKNTVTVNMELTAEEWRNRYE 345          

HSP 2 Score: 24.6386 bits (52), Expect = 3.558e-21
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 1
Query:   82 KGRRVRSTSWTNVNEASSRSH 144
            +G+  R  + TN+NE SSRSH
Sbjct:  184 EGKSNRHIAVTNMNEHSSRSH 204          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF5A_PONAB (Kinesin heavy chain isoform 5A OS=Pongo abelii GN=KIF5A PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.558e-21
Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = 3
Query:  198 LEAKTEVS-KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            +E + ++S KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL    + +VPYR+SK+T+IL+DSLG   +  M +  SP   +  ET  +L F +RA+ I++    N EL +E  KK+ E
Sbjct:  218 METEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIKNTASVNLELTAEQWKKKYE 347          

HSP 2 Score: 25.409 bits (54), Expect = 3.558e-21
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSH 144
            ++G+  R  + TN+NE SSRSH
Sbjct:  185 DEGKSNRHVAVTNMNEHSSRSH 206          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF5A_HUMAN (Kinesin heavy chain isoform 5A OS=Homo sapiens GN=KIF5A PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.558e-21
Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = 3
Query:  198 LEAKTEVS-KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            +E + ++S KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL    + +VPYR+SK+T+IL+DSLG   +  M +  SP   +  ET  +L F +RA+ I++    N EL +E  KK+ E
Sbjct:  218 METEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIKNTASVNLELTAEQWKKKYE 347          

HSP 2 Score: 25.409 bits (54), Expect = 3.558e-21
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSH 144
            ++G+  R  + TN+NE SSRSH
Sbjct:  185 DEGKSNRHVAVTNMNEHSSRSH 206          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF5A_MOUSE (Kinesin heavy chain isoform 5A OS=Mus musculus GN=Kif5a PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 3.558e-21
Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            S+  I I +     E K    KL++VDL GSE+V KTGA G  LDE + IN SLSAL +VI+AL    + +VPYR+SK+T+IL+DSLG   +  M +  SP   +  ET  +L F +RA+ I++    N EL +E  KK+ E
Sbjct:  207 SIFLINIKQENVETEQKLS-GKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIKNTASVNLELTAEQWKKKYE 347          

HSP 2 Score: 25.409 bits (54), Expect = 3.558e-21
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSH 144
            ++G+  R  + TN+NE SSRSH
Sbjct:  185 DEGKSNRHVAVTNMNEHSSRSH 206          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF7_DANRE (Kinesin-like protein kif7 OS=Danio rerio GN=kif7 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.593e-21
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            SK   VDL GSER+LKTG TG+ L E   IN  L  L +VI AL   +RK  H+PYR+SK+T+IL+DSLG  +K LM+   SP   D  E++ +L++AKRAR I++
Sbjct:  244 SKFHFVDLAGSERILKTGNTGERLKESIQINSGLLVLGNVIGALGDPKRKGTHIPYRDSKITRILKDSLGGNAKTLMIACISPSSSDFDESLNTLNYAKRARNIQN 349          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KLP1_CHLRE (Kinesin-like protein KLP1 OS=Chlamydomonas reinhardtii GN=KLP1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.651e-21
Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  183 RHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLML--VHASPCEEDVGETICSLSFAKRARGIESNRELSE 545
            R  DA   +  +SKL +VDL GSER  KTG TGQTL E + IN SLS L   + AL RK  +VP+R +KLT +LRD+LG   K +M+  + A P   +  ET+ +L FA R R + ++  L+E
Sbjct:  223 RTSDAASERAVLSKLNLVDLAGSERTKKTGVTGQTLKEAQFINRSLSFLEQTVNALSRKDTYVPFRQTKLTAVLRDALGGNCKTVMVANIWAEPSHNE--ETLSTLRFASRVRTLTTDLALNE 343          

HSP 2 Score: 25.7942 bits (55), Expect = 4.651e-21
Identity = 15/48 (31.25%), Postives = 24/48 (50.00%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            D+     + GLT V +    +A   +  G + R+T+   +N  SSRSH
Sbjct:  166 DSNSNTYVRGLTLVPVRSEEEALAQFFLGEQGRTTAGHVLNAESSRSH 213          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KLP2_SCHPO (Kinesin-like protein 2 OS=Schizosaccharomyces pombe GN=klp2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.862e-21
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRG-HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIE 524
            S L ++DL GSER+  + + G+ L E +AIN SLS L DVI AL   K G ++PYRNSKLT +L+ SLG  SK LM V+ SP ++ V ET+CSL FA +    +
Sbjct:  705 STLNLIDLAGSERLSSSQSVGERLKETQAINKSLSCLGDVIHALGSGKEGTYIPYRNSKLTNLLQYSLGGNSKTLMFVNISPLKQHVPETLCSLRFATKVNNTQ 808          

HSP 2 Score: 30.4166 bits (67), Expect = 7.862e-21
Identity = 16/50 (32.00%), Postives = 23/50 (46.00%), Query Frame = 1
Query:   10 GTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYL 159
            G   I  +T   +    +  W  ++  + RS + TN NE SSRSH    L
Sbjct:  641 GRTTITNITSEPLDTPEQVTWLLDQASKNRSVAATNANEHSSRSHSVFML 690          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1B_RAT (Kinesin-like protein KIF1B OS=Rattus norvegicus GN=Kif1b PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.009e-20
Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            +VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL            ++K   +PYR+S LT +LR++LG  S+  M+   SP + +  ET+ +L +A RA+ I+ N  ++ED
Sbjct:  240 KVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKCNAVINED 363          

HSP 2 Score: 32.7278 bits (73), Expect = 1.009e-20
Identity = 14/41 (34.15%), Postives = 25/41 (60.98%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ +  +T      + G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1B_MOUSE (Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1b PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.009e-20
Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            +VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL            ++K   +PYR+S LT +LR++LG  S+  M+   SP + +  ET+ +L +A RA+ I+ N  ++ED
Sbjct:  240 KVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKCNAVINED 363          

HSP 2 Score: 32.7278 bits (73), Expect = 1.009e-20
Identity = 14/41 (34.15%), Postives = 25/41 (60.98%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ +  +T      + G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1A_HUMAN (Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.010e-20
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 3
Query:  183 RHGDALEAKTE-VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            RH       TE VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL            ++K   +PYR+S LT +LR++LG  S+  M+   SP + +  ET+ +L +A RA+ I  N  ++ED
Sbjct:  229 RHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINED 363          

HSP 2 Score: 31.9574 bits (71), Expect = 1.010e-20
Identity = 13/41 (31.71%), Postives = 25/41 (60.98%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ +  +   +   + G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTSYNDIQDLMDSGNKARTVAATNMNETSSRSH 218          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KINH_STRPU3.558e-2144.62Kinesin heavy chain OS=Strongylocentrotus purpurat... [more]
KIF5A_PONAB3.558e-2146.15Kinesin heavy chain isoform 5A OS=Pongo abelii GN=... [more]
KIF5A_HUMAN3.558e-2146.15Kinesin heavy chain isoform 5A OS=Homo sapiens GN=... [more]
KIF5A_MOUSE3.558e-2144.37Kinesin heavy chain isoform 5A OS=Mus musculus GN=... [more]
KIF7_DANRE3.593e-2150.94Kinesin-like protein kif7 OS=Danio rerio GN=kif7 P... [more]
KLP1_CHLRE4.651e-2145.53Kinesin-like protein KLP1 OS=Chlamydomonas reinhar... [more]
KLP2_SCHPO7.862e-2150.00Kinesin-like protein 2 OS=Schizosaccharomyces pomb... [more]
KIF1B_RAT1.009e-2041.13Kinesin-like protein KIF1B OS=Rattus norvegicus GN... [more]
KIF1B_MOUSE1.009e-2041.13Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1... [more]
KIF1A_HUMAN1.010e-2040.74Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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