FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF5A_RAT (Kinesin heavy chain isoform 5A OS=Rattus norvegicus GN=Kif5a PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.018e-20
Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = 3
Query:  198 LEAKTEVS-KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES----NREL-SEDLKKRXE 566
            +E + ++S KL++ DL GSE+V KTGA G  LDE + IN SLSAL +VI+AL    + +VPYR+SK+T+IL+DSLG   +  M +  SP   +  ET  +L F +RA+ I++    N EL +E  KK+ E
Sbjct:  218 IETEQKLSGKLYLADLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIKNTASVNLELTAEQWKKKYE 347          

HSP 2 Score: 25.409 bits (54), Expect = 1.018e-20
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSH 144
            ++G+  R  + TN+NE SSRSH
Sbjct:  185 DEGKSNRHVAVTNMNEHSSRSH 206          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1A_DROME (Kinesin-like protein unc-104 OS=Drosophila melanogaster GN=unc-104 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.314e-20
Identity = 55/132 (41.67%), Postives = 74/132 (56.06%), Query Frame = 3
Query:  183 RHGDALEAKTE-VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR---------RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            RH       TE VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL          +K   +PYR+S LT +LR++LG  SK  M+   SP + +  ET+ +L +A RA+ I     ++ED
Sbjct:  229 RHDLMTNLTTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKNTKKADFIPYRDSALTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQIVCKAVVNED 360          

HSP 2 Score: 33.8834 bits (76), Expect = 1.314e-20
Identity = 14/41 (34.15%), Postives = 26/41 (63.41%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ + D+       ++G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTDYQDIHDLIDEGNKARTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF4_XENLA (Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.321e-20
Identity = 54/113 (47.79%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            SKL +VDL GSER  KT A G  L EG +IN  L  L +VI+AL    +K G VPYR+SKLT++L+DSLG  S  LM+   SP + ++ ET+ +L +A RAR I++   ++ D
Sbjct:  234 SKLHLVDLAGSERQKKTKAEGDRLKEGISINRGLLCLGNVISALGDESKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNMEETLNTLRYADRARKIKNKPIVNTD 346          

HSP 2 Score: 27.335 bits (59), Expect = 1.321e-20
Identity = 16/54 (29.63%), Postives = 25/54 (46.30%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYLA 162
            D K  ++I GLTE  +           +G   R+ + T +N  SSRSH    ++
Sbjct:  166 DPKEGIKICGLTERDVKTALDTLSCLEQGNSSRTVASTAMNSQSSRSHAIFTIS 219          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF4_CHICK (Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.321e-20
Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            SKL +VDL GSER  KT A G  L EG  IN  L  L +VI+AL    +K G VPYR+SKLT++L+DSLG  S  LM+   SP + ++ ET+ +L +A RAR I++   ++ D
Sbjct:  235 SKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGEENKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIVNVD 347          

HSP 2 Score: 28.4906 bits (62), Expect = 1.321e-20
Identity = 16/48 (33.33%), Postives = 23/48 (47.92%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            D K  ++I GLTE  +           +G   R+ + T +N  SSRSH
Sbjct:  167 DPKEGIKIVGLTERNVASARDTVSCLEQGNNCRTVASTAMNSQSSRSH 214          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KINH_CAEEL (Kinesin heavy chain OS=Caenorhabditis elegans GN=unc-116 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.365e-20
Identity = 70/174 (40.23%), Postives = 103/174 (59.20%), Query Frame = 3
Query:   36 RGANPRFYKGP-MVVQ*RETG*INFMD*CE*GIQQVTLFHISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDL 551
            +GA  RF  GP  V+Q  E G  N M       +  +  H  S+  IT+ +     + K    KL++VDL GSE+V KTGA G  L+E + IN SL+AL  VI+AL    + HVPYR+SKLT+IL++SLG  S+  +++ ASP   +  ET  +L F  RA+ I++  +++E+L
Sbjct:  169 KGATERFVGGPDEVLQAIEDGKSNRMVAVTNMNEHSSRSH--SVFLITVKQEHQTTK-KQLTGKLYLVDLAGSEKVSKTGAQGTVLEEAKNINKSLTALGIVISALAEGTKSHVPYRDSKLTRILQESLGGNSRTTVIICASPSHFNEAETKSTLLFGARAKTIKNVVQINEEL 339          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF19_XENLA (Kinesin-like protein KIF19 OS=Xenopus laevis GN=kif19 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.724e-20
Identity = 53/135 (39.26%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  129 IQQVTLFHISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL--RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            I QVT+   S +  IT          +  V +L+M+DL GSER  +T   G  + EG  IN SL AL + I AL  R    +V YR+SKLT++L+DSLG  S+ +M+ H SP      E+  +L++A RA+ I++
Sbjct:  223 ILQVTVRQKSRVKNIT---------QEVRVGRLFMIDLAGSERASQTQNRGLRMKEGAHINRSLLALGNCINALSERGSNKYVNYRDSKLTRLLKDSLGGNSRTVMIAHISPASTSFEESRNTLTYADRAKNIKT 348          

HSP 2 Score: 37.3502 bits (85), Expect = 1.724e-20
Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            D+KG +++ G+TEV   +  +      KG R R+   T  N+ SSRSH  +
Sbjct:  174 DSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANKTSSRSHAIL 224          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1_DICDI (Kinesin-related protein 1 OS=Dictyostelium discoideum GN=kif1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.212e-20
Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL-----RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKKR 560
            VSK+ +VDL GSER   TGATG  L EG  IN SLS L  VI+AL      +K   VPYR+S LT +L+++LG  SK +M+   SP + +  E++ +L +A  A+ I++   ++ED + +
Sbjct:  249 VSKISLVDLAGSERANSTGATGVRLKEGANINKSLSTLGKVISALAENSTSKKAVFVPYRDSVLTYLLKETLGGNSKTIMIAAISPADINYEESLSTLRYADSAKKIKTVAVVNEDAQSK 368          

HSP 2 Score: 31.9574 bits (71), Expect = 2.212e-20
Identity = 13/41 (31.71%), Postives = 26/41 (63.41%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ +  F++     ++G + R+ + TN+N  SSRSH
Sbjct:  186 VEDLSKLAVKSFSEIDMLMDEGSKARTVASTNMNATSSRSH 226          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1A_MOUSE (Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.222e-20
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 3
Query:  183 RHGDALEAKTE-VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            RH       TE VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL            ++K   +PYR+S LT +LR++LG  S+  M+   SP + +  ET+ +L +A RA+ I  N  ++ED
Sbjct:  229 RHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAIINED 363          

HSP 2 Score: 31.187 bits (69), Expect = 2.222e-20
Identity = 13/41 (31.71%), Postives = 25/41 (60.98%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ +  +   +   + G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI16B_HUMAN (Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.231e-20
Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            VSK+ +VDL GSER   TGATG  L EG  IN SL  L +VI+AL            ++K+  VPYR+S LT +L+DSLG  SK +M+   SP + + GET+ +L +A RA+ I +   ++ED
Sbjct:  245 VSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVISALADLSQDAANTLAKKKQVFVPYRDSVLTWLLKDSLGGNSKTIMIATISPADVNYGETLSTLRYANRAKNIINKPTINED 367          

HSP 2 Score: 25.0238 bits (53), Expect = 2.231e-20
Identity = 12/41 (29.27%), Postives = 23/41 (56.10%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L++  + ++       + G   R+T+ T +N+ SSRSH
Sbjct:  184 VEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSH 224          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KL61_DROME (Bipolar kinesin KRP-130 OS=Drosophila melanogaster GN=Klp61F PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 2.239e-20
Identity = 52/135 (38.52%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  171 ITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTG-ATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKKRXEIR 572
            + I  +G   E   ++ KL +VDL GSE V K G   G  + E   IN SL  L  VI AL  +  HVPYR SKLT++L++SLG  +K  ++   SP  +D+ ET+ +L +A RA+ I++  E+++ L K+  ++
Sbjct:  239 VHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLK 373          

HSP 2 Score: 33.113 bits (74), Expect = 2.239e-20
Identity = 18/46 (39.13%), Postives = 25/46 (54.35%), Query Frame = 1
Query:    7 KGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            KG+V I+GL E+ +           KG+  R T+ T +N  SSRSH
Sbjct:  187 KGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSH 232          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF5A_RAT1.018e-2045.38Kinesin heavy chain isoform 5A OS=Rattus norvegicu... [more]
KIF1A_DROME1.314e-2041.67Kinesin-like protein unc-104 OS=Drosophila melanog... [more]
KIF4_XENLA1.321e-2047.79Chromosome-associated kinesin KIF4 OS=Xenopus laev... [more]
KIF4_CHICK1.321e-2047.79Chromosome-associated kinesin KIF4 OS=Gallus gallu... [more]
KINH_CAEEL1.365e-2040.23Kinesin heavy chain OS=Caenorhabditis elegans GN=u... [more]
KIF19_XENLA1.724e-2039.26Kinesin-like protein KIF19 OS=Xenopus laevis GN=ki... [more]
KIF1_DICDI2.212e-2042.50Kinesin-related protein 1 OS=Dictyostelium discoid... [more]
KIF1A_MOUSE2.222e-2040.74Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1... [more]
KI16B_HUMAN2.231e-2044.72Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF... [more]
KL61_DROME2.239e-2038.52Bipolar kinesin KRP-130 OS=Drosophila melanogaster... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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