FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF19_HUMAN (Kinesin-like protein KIF19 OS=Homo sapiens GN=KIF19 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.916e-20
Identity = 48/127 (37.80%), Postives = 77/127 (60.63%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEV--SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRG--HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            +++++T+ +         EV   +L+M+DL GSER  +T   GQ + EG  IN SL AL + I AL  K    ++ YR+SKLT++L+DSLG  S+ +M+ H SP      E+  +L++A RA+ I++
Sbjct:  222 AVLQVTVRQRSRVKNILQEVRQGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGSNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASSAFEESRNTLTYAGRAKNIKT 348          

HSP 2 Score: 37.3502 bits (85), Expect = 2.916e-20
Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            D+KG +++ G+TEV   +  +      KG R R+   T  N+ SSRSH  +
Sbjct:  174 DSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVL 224          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF19_MOUSE (Kinesin-like protein KIF19 OS=Mus musculus GN=Kif19 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.916e-20
Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRG--HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            +L+M+DL GSER  +T   GQ + EG  IN SL AL + I AL  K    ++ YR+SKLT++L+DSLG  S+ +M+ H SP      E+  +L++A RA+ I +
Sbjct:  245 RLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALSDKGSNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASTAFEESRNTLTYAGRAKNIRT 348          

HSP 2 Score: 38.891 bits (89), Expect = 2.916e-20
Identity = 19/54 (35.19%), Postives = 30/54 (55.56%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYLA 162
            D+KG +++ G+TEV   +  +      KG R R+   T  N+ SSRSH  + +A
Sbjct:  174 DSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVA 227          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: ARK3_ARATH (Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.972e-20
Identity = 51/123 (41.46%), Postives = 79/123 (64.23%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED-----LKKRXEIRM 575
            KL +VDL GSER+ K+G+ G TL+E ++INLSLSAL   I AL     HVP+R+SKLT++LRDS G  ++  +++   P     GET  ++ F +RA  +E+  ++ E+     L +R E+++
Sbjct:  313 KLVVVDLAGSERINKSGSEGHTLEEAKSINLSLSALGKCINALAENSSHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETTSTIMFGQRAMKVENMVKIKEEFDYKSLSRRLEVQL 435          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1A_ANOGA (Kinesin-like protein unc-104 OS=Anopheles gambiae GN=unc-104 PE=3 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 6.359e-20
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR---------RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI--------ESN----RELSEDLKKRXEIRMA 578
            +VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL          +K   +PYR+S LT +LR++LG  SK  M+   SP + +  ET+ +L +A RA+ I        ++N    REL E+++K  E+  A
Sbjct:  240 KVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEIASKNKKSKKADFIPYRDSVLTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQIVCKAVVNEDANAKLIRELKEEIQKLRELLKA 382          

HSP 2 Score: 31.5722 bits (70), Expect = 6.359e-20
Identity = 13/41 (31.71%), Postives = 25/41 (60.98%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ +  +       ++G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTSYQDIHDLIDEGNKARTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1A_AEDAE (Kinesin-like protein unc-104 OS=Aedes aegypti GN=unc-104 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.359e-20
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR---------RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGI--------ESN----RELSEDLKKRXEIRMA 578
            +VSK+ +VDL GSER   TGA G  L EG  IN SL+ L  VI+AL          +K   +PYR+S LT +LR++LG  SK  M+   SP + +  ET+ +L +A RA+ I        ++N    REL E+++K  E+  A
Sbjct:  240 KVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKSKKSKKADFIPYRDSVLTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQIVCKAVVNEDANAKLIRELKEEIQKLRELLKA 382          

HSP 2 Score: 31.5722 bits (70), Expect = 6.359e-20
Identity = 13/41 (31.71%), Postives = 25/41 (60.98%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            +E L+++ +  +       ++G + R+ + TN+NE SSRSH
Sbjct:  178 VEDLSKLAVTSYQDIHDLIDEGNKARTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF2_DICDI (Kinesin-related protein 2 OS=Dictyostelium discoideum GN=kif2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.775e-20
Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = 3
Query:  231 MVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIE 524
            ++DL GSERV ++G  G+ L E +AIN SLS+L DVI+AL  K  H+PYRNSKLT +L++S+G  SK LM V+ SP  +D+ E+  SL FA +    E
Sbjct:  685 LIDLAGSERVSRSGVEGKQLKETQAINKSLSSLGDVISALANKEQHIPYRNSKLTFLLQNSIGGNSKTLMFVNISPELKDLQESTSSLRFAAKVNSCE 782          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF4A_HUMAN (Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 8.311e-20
Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR--RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            SKL +VDL GSER  KT A G  L EG  IN  L  L +VI+AL   +K G VPYR+SKLT++L+DSLG  S  LM+   SP + ++ ET+ +L +A RAR I++
Sbjct:  234 SKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKN 338          

HSP 2 Score: 26.5646 bits (57), Expect = 8.311e-20
Identity = 16/54 (29.63%), Postives = 25/54 (46.30%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYLA 162
            D K  ++I GLTE  +           +G   R+ + T +N  SSRSH    ++
Sbjct:  166 DPKEGIKIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTIS 219          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KLPA_EMENI (Kinesin-like protein klpA OS=Emericella nidulans GN=klpA PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.509e-19
Identity = 53/95 (55.79%), Postives = 65/95 (68.42%), Query Frame = 3
Query:  231 MVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR--RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKR 509
            +VDL GSER+  +GATG  L E + IN SLS L DVIAAL   +K GH+PYRNSKLT +L+ SLG  SK LM V  SP +  + ET+ SL FA +
Sbjct:  651 LVDLAGSERLSHSGATGDRLKETQNINRSLSCLGDVIAALGQGKKDGHIPYRNSKLTYLLQFSLGGNSKTLMFVMVSPLQAHLSETLTSLKFATK 745          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1C_MOUSE (Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1c PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.831e-19
Identity = 50/122 (40.98%), Postives = 73/122 (59.84%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKKR 560
            +VSK+ +VDL GSER   +GA G  L EG  IN SL+ L  VI+AL      +RK   +PYR+S LT +L+++LG  S+  M+   SP + +  ET+ +L +A R + I  N  ++ED   R
Sbjct:  240 KVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNAR 361          

HSP 2 Score: 28.8758 bits (63), Expect = 1.831e-19
Identity = 12/41 (29.27%), Postives = 24/41 (58.54%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++ L+++ +  +       + G + R+ + TN+NE SSRSH
Sbjct:  178 VQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: ARK2_ARATH (Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.971e-19
Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED-----LKKRXEIRM 575
            SKL +VDL GSERV K+G+ G  L+E ++INLSLSAL   I A+     HVP R+SKLT++LRDS G  ++  ++V   P     GET  ++ F +RA  +E+  ++ E+     L K+ E+++
Sbjct:  302 SKLVLVDLAGSERVHKSGSEGHMLEEAKSINLSLSALGKCINAIAENSPHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETTSTILFGQRAMKVENMLKIKEEFDYKSLSKKLEVQL 425          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF19_HUMAN2.916e-2037.80Kinesin-like protein KIF19 OS=Homo sapiens GN=KIF1... [more]
KIF19_MOUSE2.916e-2043.27Kinesin-like protein KIF19 OS=Mus musculus GN=Kif1... [more]
ARK3_ARATH3.972e-2041.46Armadillo repeat-containing kinesin-like protein 3... [more]
KIF1A_ANOGA6.359e-2039.86Kinesin-like protein unc-104 OS=Anopheles gambiae ... [more]
KIF1A_AEDAE6.359e-2039.86Kinesin-like protein unc-104 OS=Aedes aegypti GN=u... [more]
KIF2_DICDI6.775e-2051.02Kinesin-related protein 2 OS=Dictyostelium discoid... [more]
KIF4A_HUMAN8.311e-2050.48Chromosome-associated kinesin KIF4A OS=Homo sapien... [more]
KLPA_EMENI1.509e-1955.79Kinesin-like protein klpA OS=Emericella nidulans G... [more]
KIF1C_MOUSE1.831e-1940.98Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1... [more]
ARK2_ARATH1.971e-1941.94Armadillo repeat-containing kinesin-like protein 2... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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