FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF4B_HUMAN (Chromosome-associated kinesin KIF4B OS=Homo sapiens GN=KIF4B PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.377e-19
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR--RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIES 527
            SKL +VDL GSER  KT A G  L EG  IN  L  L +VI+AL   +K   VPYR+SKLT++L+DSLG  S  LM+   SP + ++ ET+ +L +A RAR I++
Sbjct:  234 SKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKKGSFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLSTLRYADRARKIKN 338          

HSP 2 Score: 26.5646 bits (57), Expect = 2.377e-19
Identity = 16/54 (29.63%), Postives = 25/54 (46.30%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYLA 162
            D K  ++I GLTE  +           +G   R+ + T +N  SSRSH    ++
Sbjct:  166 DPKEGIKIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTIS 219          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF4_MOUSE (Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.377e-19
Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALR--RKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            SKL +VDL GSER  KT A G  L EG  IN  L  L +VI+AL   +K   VPYR+SKLT++L+DSLG  S  LM+   SP + ++ ET+ +L +A RAR I++   ++ D
Sbjct:  235 SKLHLVDLAGSERQKKTKAEGDRLREGININRGLLCLGNVISALGDDKKGNFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIINID 346          

HSP 2 Score: 27.335 bits (59), Expect = 2.377e-19
Identity = 16/54 (29.63%), Postives = 26/54 (48.15%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYLA 162
            D K  ++I GLTE  +   +       +G   R+ + T +N  SSRSH    ++
Sbjct:  167 DPKEGIKIVGLTEKTVLVASDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTIS 220          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1C_HUMAN (Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1C PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 2.381e-19
Identity = 50/122 (40.98%), Postives = 73/122 (59.84%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKKR 560
            +VSK+ +VDL GSER   +GA G  L EG  IN SL+ L  VI+AL      +RK   +PYR+S LT +L+++LG  S+  M+   SP + +  ET+ +L +A R + I  N  ++ED   R
Sbjct:  240 KVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADMQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAIINEDPNAR 361          

HSP 2 Score: 28.8758 bits (63), Expect = 2.381e-19
Identity = 12/41 (29.27%), Postives = 24/41 (58.54%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++ L+++ +  +       + G + R+ + TN+NE SSRSH
Sbjct:  178 VQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSH 218          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: ARK2_ORYSJ (Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.363e-19
Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            SKL +VDL GSER+ K+G+ G TL+E ++INLSLSAL   I AL     HVP R+SKLT++L+DS G  ++  ++V   P     GET  ++ F +RA  +E+  +L E+
Sbjct:  300 SKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSPHVPVRDSKLTRLLKDSFGGTARTSLVVTIGPSPRHRGETTSTIMFGQRAMKVENMVKLKEE 409          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF15_STRPU (Kinesin-like protein KIF15 OS=Strongylocentrotus purpuratus GN=KIF15 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.006e-19
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL----RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            VS+L +VDL GSER   T A G  L E  +IN SLS L +VI AL      K+ HVPYR+SKL+ +LRDSLG  +K  ++ +  P  +  GET+ +L FA+RA+ I++   ++ED
Sbjct:  249 VSQLHLVDLAGSERQKDTKAIGVRLKEAGSINKSLSILGNVIMALVDIAHGKQRHVPYRDSKLSFLLRDSLGGNAKTYIIANVHPDAKCFGETLSTLKFARRAKMIKNRAVVNED 363          

HSP 2 Score: 25.0238 bits (53), Expect = 4.006e-19
Identity = 15/46 (32.61%), Postives = 23/46 (50.00%), Query Frame = 1
Query:    7 KGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            K  V ++GL E  +   ++A      G   R  + T++N  SSRSH
Sbjct:  183 KKGVFVDGLIERAVASASEAYGVLQAGWHNRRVAATSMNRESSRSH 228          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF6_HUMAN (Kinesin-like protein KIF6 OS=Homo sapiens GN=KIF6 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 4.050e-19
Identity = 53/119 (44.54%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRK-RGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKKRXEIR 572
            +KL +VDL GSERV KTG  G  L E + INLSL  L  VI AL  K R H+PYRNS +T +LRDSLG      M+   S  + ++ E+I +  FA+R   I++   L+E++  R  I+
Sbjct:  244 AKLHLVDLAGSERVAKTGVGGHLLTEAKYINLSLHYLEQVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDESISTCRFAQRVALIKNEAVLNEEINPRLVIK 362          

HSP 2 Score: 23.0978 bits (48), Expect = 4.050e-19
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1
Query:   97 RSTSWTNVNEASSRSHC 147
            R  + T +N+AS+RSHC
Sbjct:  209 RMIAETPMNQASTRSHC 225          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF1C_RAT (Kinesin-like protein KIF1C OS=Rattus norvegicus GN=Kif1c PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.810e-19
Identity = 49/122 (40.16%), Postives = 73/122 (59.84%), Query Frame = 3
Query:  213 EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLKKR 560
            +VSK+ +V+L GSER   +GA G  L EG  IN SL+ L  VI+AL      +RK   +PYR+S LT +L+++LG  S+  M+   SP + +  ET+ +L +A R + I  N  ++ED   R
Sbjct:  239 KVSKISLVNLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNAR 360          

HSP 2 Score: 28.8758 bits (63), Expect = 6.810e-19
Identity = 12/41 (29.27%), Postives = 24/41 (58.54%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++ L+++ +  +       + G + R+ + TN+NE SSRSH
Sbjct:  177 VQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSH 217          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: ARK1_ARATH (Armadillo repeat-containing kinesin-like protein 1 OS=Arabidopsis thaliana GN=ARK1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 6.815e-19
Identity = 46/120 (38.33%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  189 GDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            GD    +   SKL +VDL GSER+ K+G  G  ++E + INLSL++L   I AL     H+P R+SKLT++LRDS G  ++  +++   P      ET  ++ F +RA  I +  +L E+
Sbjct:  331 GDKAIPRVRKSKLLIVDLAGSERINKSGTDGHMIEEAKFINLSLTSLGKCINALAEGSSHIPTRDSKLTRLLRDSFGGSARTSLIITIGPSARYHAETTSTIMFGQRAMKIVNMVKLKEE 450          

HSP 2 Score: 28.1054 bits (61), Expect = 6.815e-19
Identity = 19/52 (36.54%), Postives = 23/52 (44.23%), Query Frame = 1
Query:    1 DAK-GTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            DAK G V + G T V I D          G   R  + T +N  SSRSH  +
Sbjct:  259 DAKTGEVSVPGATVVNIQDLDHFLQVLQVGETNRHAANTKMNTESSRSHAIL 310          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI18A_MOUSE (Kinesin-like protein KIF18A OS=Mus musculus GN=Kif18a PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.837e-19
Identity = 47/115 (40.87%), Postives = 71/115 (61.74%), Query Frame = 3
Query:  195 ALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESN 530
            ++     ++K+ ++DL GSER   +GA G    EG  IN SL AL +VI AL   +R+  H+PYRNSKLT++L+DSLG   + +M+   SP      +T  +L +A RA+ I+S+
Sbjct:  244 SINQNVRIAKMSLIDLAGSERASVSGAKGSRFVEGTNINKSLLALGNVINALANTKRRNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSLFYDDTYNTLKYANRAKEIKSS 358          

HSP 2 Score: 26.9498 bits (58), Expect = 6.837e-19
Identity = 19/55 (34.55%), Postives = 28/55 (50.91%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCF--IYL 159
            D++  V ++GLT  Q     +     + G + R+   T+VN  SSRSH    IYL
Sbjct:  182 DSQKGVVVQGLTLHQPKSSEEILQLLDNGNKNRTQHPTDVNAVSSRSHAVFQIYL 236          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF4_DICDI (Kinesin-related protein 4 OS=Dictyostelium discoideum GN=kif4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.491e-19
Identity = 60/141 (42.55%), Postives = 84/141 (59.57%), Query Frame = 3
Query:  141 TLFHISSLMRITIFRHGDALEAKT----EVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRG--HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSE 545
            T+ + SS    TIFR       K     ++S L +VDL GSERV  TGA G  L EG  IN SL  L+ VI+ L  ++   HVPYR+SKLT+IL+ SLG  SK  +L   +P      E+I +L FAKRA+ +++N ++++
Sbjct:  211 TMMNDSSSRSHTIFRMQIQSTCKQNGTIQMSTLTLVDLAGSERVSSTGAEGVRLKEGTHINKSLMTLSKVISKLSEEKTQQHVPYRDSKLTRILQPSLGGNSKTAILCTITPATTHQEESISTLQFAKRAKRVKTNYKINQ 351          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF4B_HUMAN2.377e-1949.52Chromosome-associated kinesin KIF4B OS=Homo sapien... [more]
KIF4_MOUSE2.377e-1947.32Chromosome-associated kinesin KIF4 OS=Mus musculus... [more]
KIF1C_HUMAN2.381e-1940.98Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1... [more]
ARK2_ORYSJ3.363e-1945.45Armadillo repeat-containing kinesin-like protein 2... [more]
KIF15_STRPU4.006e-1946.09Kinesin-like protein KIF15 OS=Strongylocentrotus p... [more]
KIF6_HUMAN4.050e-1944.54Kinesin-like protein KIF6 OS=Homo sapiens GN=KIF6 ... [more]
KIF1C_RAT6.810e-1940.16Kinesin-like protein KIF1C OS=Rattus norvegicus GN... [more]
ARK1_ARATH6.815e-1938.33Armadillo repeat-containing kinesin-like protein 1... [more]
KI18A_MOUSE6.837e-1940.87Kinesin-like protein KIF18A OS=Mus musculus GN=Kif... [more]
KIF4_DICDI7.491e-1942.55Kinesin-related protein 4 OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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