FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KI18A_HUMAN (Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF18A PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 8.888e-19
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 3
Query:  195 ALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL---RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESN 530
            ++     ++K+ ++DL GSER   +GA G    EG  IN SL AL +VI AL   +RK  H+PYRNSKLT++L+DSLG   + +M+   SP      +T  +L +A RA+ I+S+
Sbjct:  244 SINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDIKSS 358          

HSP 2 Score: 24.6386 bits (52), Expect = 8.888e-19
Identity = 18/55 (32.73%), Postives = 26/55 (47.27%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCF--IYL 159
            D +  V + GLT  Q     +     + G + R+   T++N  SSRSH    IYL
Sbjct:  182 DTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYL 236          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3C_PONAB (Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3C PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.158e-18
Identity = 57/160 (35.62%), Postives = 80/160 (50.00%), Query Frame = 3
Query:  150 HISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTG------------------------ATGQTLDEGRAINLSLSALADVIAALRRKRG-HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            H   ++ +     G   +    V KL +VDL GSER  K G                        A G+   E   INLSLSAL +VIAAL   R  H+PYR+SKLT++L+DSLG  +K +M+    P      E++ +L FA RA+ I++   ++ED K
Sbjct:  217 HAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGASTPSSGGSGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPK 376          

HSP 2 Score: 26.9498 bits (58), Expect = 1.158e-18
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSHCFIYL 159
            N G + R+   T++NE SSRSH    +
Sbjct:  196 NLGNQTRAVGSTHMNEVSSRSHAIFII 222          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3C_HUMAN (Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3C PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.158e-18
Identity = 57/160 (35.62%), Postives = 80/160 (50.00%), Query Frame = 3
Query:  150 HISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTG------------------------ATGQTLDEGRAINLSLSALADVIAALRRKRG-HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            H   ++ +     G   +    V KL +VDL GSER  K G                        A G+   E   INLSLSAL +VIAAL   R  H+PYR+SKLT++L+DSLG  +K +M+    P      E++ +L FA RA+ I++   ++ED K
Sbjct:  217 HAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPK 376          

HSP 2 Score: 26.9498 bits (58), Expect = 1.158e-18
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSHCFIYL 159
            N G + R+   T++NE SSRSH    +
Sbjct:  196 NLGNQTRAVGSTHMNEVSSRSHAIFII 222          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: UN104_CAEEL (Kinesin-like protein unc-104 OS=Caenorhabditis elegans GN=unc-104 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 1.487e-18
Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL--------RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSED 548
            SK+ +VDL GSER   TGA GQ L EG  IN SL+ L  VI+ L        +  +G +PYR+S LT +LR++LG  SK  ML   SP + +  ET+ +L +A RA+ I     ++ED
Sbjct:  239 SKISLVDLAGSERANSTGAEGQRLKEGANINKSLTTLGLVISKLAEESTKKKKSNKGVIPYRDSVLTWLLRENLGGNSKTAMLAALSPADINFDETLSTLRYADRAKQIVCQAVVNED 356          

HSP 2 Score: 27.7202 bits (60), Expect = 1.487e-18
Identity = 12/41 (29.27%), Postives = 24/41 (58.54%), Query Frame = 1
Query:   22 IEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSH 144
            ++ LT++ +  +       ++G + R+ + TN+N  SSRSH
Sbjct:  175 VDDLTKMAVCSYHDICNLMDEGNKARTVAATNMNSTSSRSH 215          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: CTK2_XENLA (Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.669e-18
Identity = 52/117 (44.44%), Postives = 75/117 (64.10%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKR 509
            S+ ++ I       + KT  S + ++DL GSER+ ++ +TG  L E + IN SLS L  VI +L  K  H+PYRNSKLT +L++SLG  +KVLM V+ SP EE+  E++ SL FA +
Sbjct:  514 SVFQLKIEGENKQRDLKTS-SMISLIDLAGSERLDRSLSTGDRLKETQCINTSLSTLGMVITSLCNKDSHIPYRNSKLTYLLQNSLGGNAKVLMFVNISPLEENFAESLNSLRFASK 629          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: ARK1_ORYSJ (Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0152900 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.952e-18
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 3
Query:  219 SKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDL 551
            SKL +VDL GSER+ K+G+ G  ++E + INLSL++L   I AL     H+P R+SKLT+ILRDS G  ++  ++V   P      ET  ++ F +RA  I +   + E++
Sbjct:  299 SKLLIVDLAGSERIDKSGSEGHMIEEAKFINLSLTSLGKCINALAENSPHIPTRDSKLTRILRDSFGGTARTSLIVTIGPSSRHFSETSSTIMFGQRAMKIVNTIRIKEEV 409          

HSP 2 Score: 26.9498 bits (58), Expect = 1.952e-18
Identity = 15/50 (30.00%), Postives = 22/50 (44.00%), Query Frame = 1
Query:   10 GTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYL 159
            G V + G  +V+I D          G   R  + T +N  SSRSH  + +
Sbjct:  216 GEVSLPGAAKVEIRDLEHVFQLLQIGEMNRHAANTKMNTESSRSHAILII 265          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3C_RAT (Kinesin-like protein KIF3C OS=Rattus norvegicus GN=Kif3c PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.958e-18
Identity = 56/162 (34.57%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  150 HISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLK--------------------------TGATGQTLDEGRAINLSLSALADVIAALRRKRG-HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            H   ++ +     G   +    V KL +VDL GSER  K                          +G++G+   E   INLSLSAL +VIAAL   R  H+PYR+SKLT++L+DSLG  +K +M+    P      E++ +L FA RA+ I++   ++ED K
Sbjct:  217 HAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTPGGPATQSTAGGGGGGGGTSGSGSSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPK 378          

HSP 2 Score: 26.9498 bits (58), Expect = 1.958e-18
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSHCFIYL 159
            N G + R+   T++NE SSRSH    +
Sbjct:  196 NLGNQARAVGSTHMNEVSSRSHAIFVI 222          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3C_BOVIN (Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.958e-18
Identity = 56/158 (35.44%), Postives = 79/158 (50.00%), Query Frame = 3
Query:  150 HISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGAT----------------------GQTLDEGRAINLSLSALADVIAALRRKRG-HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            H   ++ +     G   +    V KL +VDL GSER  K G                        G+   E   INLSLSAL +VIAAL   R  H+PYR+SKLT++L+DSLG  +K +M+    P      E++ +L FA RA+ I++   ++ED K
Sbjct:  217 HAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTTGGTATQPTGGGGGGGGGGGGGERPKEASKINLSLSALGNVIAALSGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPK 374          

HSP 2 Score: 26.9498 bits (58), Expect = 1.958e-18
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSHCFIYL 159
            N G + R+   T++NE SSRSH    +
Sbjct:  196 NLGNQTRAVGSTHMNEVSSRSHAIFVI 222          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3C_MOUSE (Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.546e-18
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 3
Query:  150 HISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTG--------------------------ATGQTLDEGRAINLSLSALADVIAALRRKRG-HVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            H   ++ +     G   +    V KL +VDL GSER  K G                          ++G+   E   INLSLSAL +VIAAL   R  H+PYR+SKLT++L+DSLG  +K +M+    P      E++ +L FA RA+ I++   ++ED K
Sbjct:  217 HAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPK 378          

HSP 2 Score: 26.9498 bits (58), Expect = 2.546e-18
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSHCFIYL 159
            N G + R+   T++NE SSRSH    +
Sbjct:  196 NLGNQARAVGSTHMNEVSSRSHAIFVI 222          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF22_MOUSE (Kinesin-like protein KIF22 OS=Mus musculus GN=Kif22 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.617e-18
Identity = 47/139 (33.81%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  138 VTLFHISSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            V L  +    R+T FR  +         KL+++DL GSE   +TG  G  L E  AIN SL  L  V+ AL +    +PYR+SKLT++L+DSLG  +  +++ + +P      +TI +L+F  R++ + +    +E L+
Sbjct:  244 VLLVKVDQRERLTPFRQREG--------KLYLIDLAGSEDNRRTGNQGIRLKESGAINTSLFVLGKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYQDTISALNFTARSKEVINRPFTNESLQ 374          

HSP 2 Score: 33.8834 bits (76), Expect = 5.617e-18
Identity = 17/51 (33.33%), Postives = 26/51 (50.98%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            D +G + I GLT+  I  F+     +    R R+   T +N+ SSRSH  +
Sbjct:  195 DCRGNILIPGLTQKPITSFSDFEQHFLPASRNRAVGATRLNQRSSRSHAVL 245          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KI18A_HUMAN8.888e-1941.74Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF... [more]
KIF3C_PONAB1.158e-1835.63Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3... [more]
KIF3C_HUMAN1.158e-1835.63Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3... [more]
UN104_CAEEL1.487e-1843.22Kinesin-like protein unc-104 OS=Caenorhabditis ele... [more]
CTK2_XENLA1.669e-1844.44Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 ... [more]
ARK1_ORYSJ1.952e-1840.54Armadillo repeat-containing kinesin-like protein 1... [more]
KIF3C_RAT1.958e-1834.57Kinesin-like protein KIF3C OS=Rattus norvegicus GN... [more]
KIF3C_BOVIN1.958e-1835.44Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C ... [more]
KIF3C_MOUSE2.546e-1834.57Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3... [more]
KIF22_MOUSE5.617e-1833.81Kinesin-like protein KIF22 OS=Mus musculus GN=Kif2... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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