FC869145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_CHLAT (50S ribosomal protein L5, chloroplastic OS=Chlorokybus atmophyticus GN=rpl5 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.328e-50 Identity = 89/148 (60.14%), Postives = 120/148 (81.08%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK YLEK P LRE F Y N+HQ+P+IEKI++NCG+G+A+QNAK L++AM +L++I GQ+ V TRA+ +IA FK+R+ P+GI++TLRGN MY+FLDRLINL LPR +DFQGV+ FDGHGNY++G+KEQ +FPEI +D + + R Sbjct: 4 RLKAIYLEKAAPRLREMFEYKNVHQIPRIEKIIINCGLGEASQNAKSLDSAMKELSIIAGQKGVITRAKKAIANFKLRKDMPVGISITLRGNSMYAFLDRLINLALPRIKDFQGVSSKGFDGHGNYNLGLKEQLMFPEINFDQIDQIR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_ACAM1 (50S ribosomal protein L5 OS=Acaryochloris marina (strain MBIC 11017) GN=rplE PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.040e-50 Identity = 94/167 (56.29%), Postives = 129/167 (77.25%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 T RLKT YL+ VP L+E+F Y N H++PK+ K+ VN G+G+A+QNAK LE ++ +LA+ITGQRPV TRA+ +IA FKIR+G P+G+ VTLRG MY+FLDRL+NL LPR RDF+GV+P SFDG GNY++G++EQ +FPE+ YD++ + R + + KTD+E R Sbjct: 2 TVRLKTLYLDTAVPKLQEQFKYKNAHEIPKVTKVSVNRGLGEASQNAKALERSLEELAVITGQRPVVTRAKKAIAGFKIRQGMPVGVMVTLRGERMYAFLDRLVNLALPRIRDFRGVSPKSFDGRGNYTLGLREQLIFPEVDYDSIDQIRGMDISIITTAKTDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_MESVI (50S ribosomal protein L5, chloroplastic OS=Mesostigma viride GN=rpl5 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.040e-50 Identity = 98/163 (60.12%), Postives = 126/163 (77.30%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKE 666 RLKT YLE V L+E F Y N HQ+P+I+KIV+NCG+ +A+QN+K LE+AM +L++I GQ+ V TRA+ +IA FKIREG P+GI +TLRG+ MY+FLDRLINL LPR RDFQGV+ SFDGHGNY++G+KEQ +FPEI YD + K R + + N KTD E Sbjct: 4 RLKTLYLESAVLKLQETFGYKNPHQIPRIKKIVINCGLSEASQNSKSLESAMKELSIIAGQKGVITRAKKAIAGFKIREGLPIGICITLRGDSMYAFLDRLINLALPRIRDFQGVSSKSFDGHGNYNLGLKEQLMFPEIDYDQIDKIRGMDICIVTNAKTDSE 166
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_NOSP7 (50S ribosomal protein L5 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplE PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.971e-50 Identity = 94/167 (56.29%), Postives = 128/167 (76.65%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 T RLK+ Y E IVP L +F YTN+HQVPK+ K+ +N G+G+AAQNAK LEA++N++AL+TGQ+PV TRA+ +IA FKIR+G P+GI VTLR MY+F DRL++L LPR RDF+GV+P SFDG GNY++GV+EQ +FPE+ YD++ + R + + K D+E R Sbjct: 3 TTRLKSLYQETIVPKLINQFQYTNVHQVPKLVKVTINRGLGEAAQNAKSLEASINEIALVTGQKPVVTRAKKAIAGFKIRQGMPVGIMVTLRAERMYAFFDRLVSLSLPRIRDFRGVSPKSFDGRGNYTLGVREQLIFPEVEYDSVDQVRGMDISIITTAKNDEEGR 169
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_THEPX (50S ribosomal protein L5 OS=Thermoanaerobacter sp. (strain X514) GN=rplE PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.186e-50 Identity = 93/165 (56.36%), Postives = 125/165 (75.76%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 RL+ Y +++VP L E F Y NI QVPK+EK+V+N G+G+A +N K LEAA++DL +I GQ+PV TRA+ SIA FKIR+G P+G+ VTLRG MY F+D+L N+ LPR RDF+GV+PNSFDG GNY++G+KEQ +FPEI YD + K R + + KTD+EA+ Sbjct: 3 RLREKYEKEVVPALMERFGYKNIMQVPKVEKVVINIGVGEAKENPKALEAAVDDLTMIAGQKPVITRAKRSIANFKIRKGMPIGVKVTLRGERMYEFMDKLFNIALPRVRDFKGVSPNSFDGRGNYALGIKEQLIFPEIDYDKIDKIRGMDIIIVTTAKTDEEAK 167
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_THEP3 (50S ribosomal protein L5 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplE PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.186e-50 Identity = 93/165 (56.36%), Postives = 125/165 (75.76%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 RL+ Y +++VP L E F Y NI QVPK+EK+V+N G+G+A +N K LEAA++DL +I GQ+PV TRA+ SIA FKIR+G P+G+ VTLRG MY F+D+L N+ LPR RDF+GV+PNSFDG GNY++G+KEQ +FPEI YD + K R + + KTD+EA+ Sbjct: 3 RLREKYEKEVVPALMERFGYKNIMQVPKVEKVVINIGVGEAKENPKALEAAVDDLTMIAGQKPVITRAKRSIANFKIRKGMPIGVKVTLRGERMYEFMDKLFNIALPRVRDFKGVSPNSFDGRGNYALGIKEQLIFPEIDYDKIDKIRGMDIIIVTTAKTDEEAK 167
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_THETN (50S ribosomal protein L5 OS=Thermoanaerobacter tengcongensis GN=rplE PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.846e-50 Identity = 94/165 (56.97%), Postives = 125/165 (75.76%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 RL+ Y +++VP L E F Y NI QVPK+EK+V+N G+G+A +N K LEAAMNDL +I+GQ+PV TRA+ SI+ FKIR+G P+G+ VTLR MY FLD+L N+ LPR RDF+GV+PNSFDG GNY++GV+EQ +FPEI YD + K R + + KTD+EA+ Sbjct: 3 RLREKYEKEVVPALMERFGYKNIMQVPKLEKVVINIGVGEAKENPKALEAAMNDLMMISGQKPVITRAKKSISNFKIRKGMPIGVKVTLRRERMYEFLDKLFNIALPRVRDFKGVSPNSFDGRGNYALGVREQLIFPEIDYDKIDKVRGMDIIIVTTAKTDEEAK 167
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_DESAP (50S ribosomal protein L5 OS=Desulforudis audaxviator (strain MP104C) GN=rplE PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.574e-49 Identity = 90/166 (54.22%), Postives = 129/166 (77.71%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARDF 678 LK Y+E+++P + ++F Y N+ +VP++EK+V+N G+G+A QNAK ++AAM DL ITGQ+PV TRA+ S+A FKIREG +G+ VTLRG+ MY F+DRLIN+ LPR RDF+GV+P +FDG GNY++G+KEQ +FPEI YD + K R + + + K+D+EAR+F Sbjct: 4 LKQKYIEEVIPAMMDKFKYRNVMEVPRLEKVVINIGMGEAVQNAKAIDAAMQDLRTITGQQPVVTRAKKSVAAFKIREGMRIGLKVTLRGSRMYDFVDRLINVALPRVRDFRGVSPKAFDGRGNYTLGLKEQLIFPEIDYDKIDKVRGMDITFVTSAKSDEEAREF 169
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_ZYGCR (50S ribosomal protein L5, chloroplastic OS=Zygnema circumcarinatum GN=rpl5 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.362e-49 Identity = 91/150 (60.67%), Postives = 118/150 (78.67%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 T RLKT YL +VP LR++ Y NIHQVP++ KIV+NCG+G+A+QNAK LE+ + DL+ ITGQ+P+ TRA+ SIA F+IR +G+ VTLR + MY+FLDRLI+L LPR RDFQG+N NSFDGHGN+ +G+KEQ +FPEI YD + K R Sbjct: 2 TQRLKTFYLNTVVPKLRKQLEYQNIHQVPQVTKIVINCGLGEASQNAKSLESTLRDLSFITGQKPIVTRAKKSIAGFQIRAQMSVGVCVTLRADAMYAFLDRLIHLALPRIRDFQGLNSNSFDGHGNFHLGLKEQLMFPEIDYDKIEKLR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_THEEB (50S ribosomal protein L5 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplE PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.734e-49 Identity = 95/165 (57.58%), Postives = 124/165 (75.15%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 RLK Y + +VP L ++F Y NIHQVPKI K+ VN G+G+AAQNAK LEA + ++A ITGQ+PV TRA+ +IA FKIR+G P+G+AVTLR MY+FLDRLINL LPR RDF+GVNP SFDG GNY++G++EQ +FPE+ YD + + R + + TD+E R Sbjct: 4 RLKDHYNKTVVPQLMQQFQYKNIHQVPKIVKVTVNRGLGEAAQNAKALEATLAEIATITGQKPVVTRAKKAIAGFKIRKGMPVGVAVTLRSERMYAFLDRLINLALPRIRDFRGVNPKSFDGRGNYTLGLREQLIFPEVNYDDIDQIRGMDVSIITTANTDEEGR 168 The following BLAST results are available for this feature:
BLAST of FC869145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869145 ID=FC869145; Name=FC869145; organism=Citrus clementina; type=EST; length=685bpback to top |