FC869145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_PROM9 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplE PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.945e-45 Identity = 87/147 (59.18%), Postives = 111/147 (75.51%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 LK Y E I P L ++ NIHQVPK+ K+ VN G+G+AA N+K LEA++N++A ITGQ+ + TRA+ +IA FKIREG P+G VTLRG+ MYSFL+R INL LPR RDF+GVNP SFDG GNY++GVKEQ +FPEI +D + R Sbjct: 3 LKNRYKESIRPKLLKDLGLKNIHQVPKVVKVNVNRGLGEAASNSKSLEASLNEMATITGQKALVTRAKKAIAGFKIREGMPIGCTVTLRGDRMYSFLERFINLALPRIRDFRGVNPKSFDGRGNYTVGVKEQLIFPEISFDKIDSIR 149
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_PROM3 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplE PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.945e-45 Identity = 87/143 (60.84%), Postives = 113/143 (79.02%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDAL 612 LK Y E I P L ++ S +NIH+VPK+ KI VN G+G+AAQNAK LEA++ +LA ITGQ+ V TRA+ +IA FKIR+G P+G AVTLRG MY+FL+RLINL LPR RDF+GV+P SFDG GNY++GV+EQ +FPE+ +D + Sbjct: 3 LKQRYRETIQPKLLKDLSLSNIHEVPKVLKITVNRGLGEAAQNAKSLEASITELATITGQKVVVTRAKKAIAGFKIRQGMPIGCAVTLRGERMYAFLERLINLALPRIRDFRGVSPKSFDGRGNYTLGVREQLIFPEVSFDKI 145
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_PROM0 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplE PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.945e-45 Identity = 87/147 (59.18%), Postives = 111/147 (75.51%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 LK Y E I P L ++ NIHQVPK+ K+ VN G+G+AA N+K LEA++N++A ITGQ+ + TRA+ +IA FKIREG P+G VTLRG+ MYSFL+R INL LPR RDF+GVNP SFDG GNY++GVKEQ +FPEI +D + R Sbjct: 3 LKNRYKESIRPKLLKDLGLKNIHQVPKVVKVNVNRGLGEAASNSKALEASLNEMATITGQKALVTRAKKAIAGFKIREGMPIGCTVTLRGDRMYSFLERFINLALPRIRDFRGVNPKSFDGRGNYTVGVKEQLIFPEISFDKIDSIR 149
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CLOTE (50S ribosomal protein L5 OS=Clostridium tetani GN=rplE PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.945e-45 Identity = 88/166 (53.01%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RL+ Y ++++P L E+F Y NI +VPK+EKIV+N G+G+A +N K LE+A++DL++I GQ+P+ T+A+ S+A FKIRE P+G VTLR MY F D+L+N+ LPR RDF+GV+ SFDG GNYS+GVKEQ +FPEI YD + K R + + KTD+EAR+ Sbjct: 4 RLQEKYEKEVIPALIEKFGYKNIMEVPKLEKIVINMGVGEAKENQKMLESAVSDLSIIAGQKPIVTKAKKSVANFKIRENMPIGCKVTLRKVKMYEFADKLMNVALPRVRDFRGVSSKSFDGRGNYSLGVKEQLMFPEIEYDKVDKVRGMDIIFVTTAKTDEEARE 169
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_GEOUR (50S ribosomal protein L5 OS=Geobacter uraniireducens (strain Rf4) GN=rplE PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.846e-45 Identity = 82/146 (56.16%), Postives = 118/146 (80.82%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGK 618 RL Y +++VP L ++F+Y N+ +VPK+EKIVVN G+G+A QN K L++A++++A+ITGQ+P+ T+A+ SIA FK+R+G P+G AVTLR + MY FLDRL+N+ LPR RDF+G++ +FDG+GNYS+GVKEQ +FPEI YD + K Sbjct: 3 RLNELYNKEMVPQLMKDFNYRNVMEVPKLEKIVVNMGLGEAIQNVKILDSAVDEMAVITGQKPIITKAKKSIAGFKLRQGMPIGCAVTLRKDKMYEFLDRLVNVSLPRVRDFKGISGKAFDGNGNYSLGVKEQLIFPEINYDKIDK 148
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_DEIGD (50S ribosomal protein L5 OS=Deinococcus geothermalis (strain DSM 11300) GN=rplE PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.846e-45 Identity = 87/164 (53.05%), Postives = 123/164 (75.00%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 LK Y E++ P L ++F Y++I VP+IEKIV+N G+G + ++K ++ A +LALIT Q+PV T+A+ SI+ FK+R+G P+G+ VTLRG MY FL++LIN+GLPR RDF+G+NPNSFDG GNY++G+KEQ +FPEI YD + K R + + KTD+EAR Sbjct: 4 LKAKYNEQVRPALMQQFGYSSIMAVPRIEKIVINEGLGSSKDDSKAIDKAAKELALITLQKPVITKAKKSISNFKLRQGMPVGVKVTLRGERMYVFLEKLINIGLPRIRDFRGINPNSFDGRGNYNLGIKEQLIFPEITYDMVDKVRGMDITIVTTAKTDEEAR 167
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_ALKMQ (50S ribosomal protein L5 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplE PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.846e-45 Identity = 82/166 (49.40%), Postives = 118/166 (71.08%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 R+K Y ++ P + E+F Y ++ Q+P++EKI++N G+G A +N K LE A+ +L +I GQ+P+ T+A+ S+A FK+REG +G TLRG MY F DRLIN+ LPR RDF+GVNPNSFDG GNY++GVKEQ +FPEI YD + K R + + +D+E+R+ Sbjct: 3 RIKDKYRNEVAPAMMEKFGYKSVMQIPRLEKIIINMGLGQAKENQKELEIAVKELGIIAGQKPITTKAKKSVANFKVREGMAVGAKTTLRGEKMYEFADRLINIALPRVRDFRGVNPNSFDGRGNYALGVKEQLIFPEIEYDKVDKVRGMDIILVTTANSDEESRE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LEPIN (50S ribosomal protein L5 OS=Leptospira interrogans GN=rplE PE=3 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 5.023e-45 Identity = 86/144 (59.72%), Postives = 114/144 (79.17%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDAL 612 RL+T Y ++IVP L ++F +++I QVP++EKIV+N G+G+A N K LEAA+ +LALITGQRPVKT+A+ SIA FKIREG LG VTLRG+ MY FLDRL+N+ LPR RDF+GV+ FDG GNY++ +KEQ +FPEI+ D + Sbjct: 4 RLRTKYKKEIVPELNKKFKFSSIMQVPRLEKIVLNVGMGEAHTNPKALEAAVEELALITGQRPVKTKAKKSIAGFKIREGMSLGCMVTLRGDYMYEFLDRLVNVALPRVRDFKGVSEKGFDGRGNYNMSIKEQIIFPEIKVDKI 147
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LEPIC (50S ribosomal protein L5 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rplE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.023e-45 Identity = 86/144 (59.72%), Postives = 114/144 (79.17%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDAL 612 RL+T Y ++IVP L ++F +++I QVP++EKIV+N G+G+A N K LEAA+ +LALITGQRPVKT+A+ SIA FKIREG LG VTLRG+ MY FLDRL+N+ LPR RDF+GV+ FDG GNY++ +KEQ +FPEI+ D + Sbjct: 4 RLRTKYKKEIVPELNKKFKFSSIMQVPRLEKIVLNVGMGEAHTNPKALEAAVEELALITGQRPVKTKAKKSIAGFKIREGMSLGCMVTLRGDYMYEFLDRLVNVALPRVRDFKGVSEKGFDGRGNYNMSIKEQIIFPEIKVDKI 147
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_DESAA (50S ribosomal protein L5 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rplE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.023e-45 Identity = 82/164 (50.00%), Postives = 121/164 (73.78%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPRE*MFAL-HNRKTDKEAR 672 L+T YLE + P L+EEF Y+N Q+P++ K+V+N G+G+A QN K LE A+++L LI+GQ+PV T+A+ SIA FK+REG P+G+ TLR + MY FL++L+N+ LPR RDF+G++P +FDG GNY++G++EQ +FPEI YD + K + + K D+E R Sbjct: 4 LRTEYLENVAPKLQEEFGYSNAMQIPRLSKVVLNMGLGEAIQNNKILEGAVDELTLISGQKPVVTKAKKSIAAFKLREGMPIGVTATLRRDRMYDFLNKLVNVTLPRVRDFRGISPKAFDGRGNYTLGIREQIIFPEINYDRIDKVKGLNITIVTTAKNDEEGR 167 The following BLAST results are available for this feature:
BLAST of FC869145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869145 ID=FC869145; Name=FC869145; organism=Citrus clementina; type=EST; length=685bpback to top |