FC869145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_SYNP2 (50S ribosomal protein L5 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplE PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.489e-49 Identity = 93/165 (56.36%), Postives = 127/165 (76.97%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 RLKT Y + IVP L E+F Y+N+H+VPK+ KI VN G+G+A+ NAK +E+++ +L+ ITGQRPV TRA+ +IA FKIREG P+G+ VTLR MYSFLDRLI+L LPR RDF+G++P SFDG GNYS+G++EQ +FPEI YD++ + R + + +TD+E R Sbjct: 4 RLKTLYQDSIVPKLTEQFGYSNVHEVPKLVKISVNRGLGEASSNAKAMESSIKELSTITGQRPVITRAKKAIAGFKIREGMPVGVMVTLRSEKMYSFLDRLISLALPRIRDFRGISPKSFDGRGNYSLGIREQLIFPEIDYDSIDQIRGMDISIITTARTDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_ANOFW (50S ribosomal protein L5 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplE PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.489e-49 Identity = 94/166 (56.63%), Postives = 126/166 (75.90%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK YL+++VP L +F+Y ++ QVPKIEKIV+N G+GDA QNAK L+ A+ +LALI+GQ+PV TRA+ SIA F++REG P+G VTLRG MY F D+L+++ LPR RDF+GV+ SFDG GNY++GVKEQ +FPEI YD + K R + + KTD+EAR+ Sbjct: 3 RLKEKYLKEVVPALMSKFNYKSVMQVPKIEKIVINMGVGDAVQNAKALDNAVEELALISGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVNKVRGMDIVIVTTAKTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_ALKOO (50S ribosomal protein L5 OS=Alkaliphilus oremlandii (strain OhILAs) GN=rplE PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.489e-49 Identity = 90/166 (54.22%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK Y ++ P + E+F Y ++ ++PKIEKIVVN G+GD+ N KGLEAA+ +L +ITGQ+PV TRA+ S+A FK+R+G P+G VTLRG MY F DRL+N+ LPR RDF+GVNPN+FDG GNY++G+KEQ +FPEI YD + K + + KTD+E+R+ Sbjct: 3 RLKDMYKSEVAPAMMEKFGYKSVMEIPKIEKIVVNMGLGDSKDNPKGLEAAVKELGIITGQKPVVTRAKKSVANFKLRQGMPIGAKVTLRGEKMYEFADRLLNIALPRVRDFRGVNPNAFDGRGNYALGIKEQLIFPEIEYDKVEKLHGMDIIFVTTAKTDEESRE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_CHAGL (50S ribosomal protein L5, chloroplastic OS=Chaetosphaeridium globosum GN=rpl5 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.781e-49 Identity = 87/148 (58.78%), Postives = 119/148 (80.41%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK+ YL ++P L EE Y N+HQ+P+++KIV+NCGIG+A+QNAK LE + DL++I GQRP+ RA+ +IA+F++R+ P+G++VTLRG+ MY+FLDRLINL LPR RDFQG+N SFDGHGN+ +G+KEQ +FPEI YD + K R Sbjct: 4 RLKSIYLNNVIPKLNEEAKYKNVHQIPRLKKIVINCGIGEASQNAKTLEYTIRDLSIIAGQRPLVKRAKKAIASFQLRKKMPVGVSVTLRGDAMYAFLDRLINLALPRIRDFQGLNRKSFDGHGNFHLGLKEQLMFPEIDYDKIDKLR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_TRIEI (50S ribosomal protein L5 OS=Trichodesmium erythraeum (strain IMS101) GN=rplE PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.668e-48 Identity = 92/164 (56.10%), Postives = 124/164 (75.61%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 LK Y +KIVP L ++F Y NIHQVPK+ K+ +N G+G+A+QNAK L++++ ++A ITGQ+PV TRA+ +IA FKIR+G P+G+ VTLR MY F++RLINL LPR RDF+G+NP SFDG GNYS+GVKEQ +FPEI YD + + R + + KTD+E R Sbjct: 5 LKKYYYKKIVPKLIDQFKYKNIHQVPKLVKVTINRGLGEASQNAKALDSSIKEIATITGQKPVVTRAKKAIAGFKIRQGMPVGVMVTLRSQRMYEFIERLINLALPRIRDFRGINPKSFDGRGNYSLGVKEQLIFPEIEYDKIDQIRGMDISIITTAKTDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_SYNJA (50S ribosomal protein L5 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplE PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.668e-48 Identity = 93/165 (56.36%), Postives = 129/165 (78.18%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPRE*MFAL-HNRKTDKEAR 672 RL+ Y IVP L++E YTNIHQVP++EKIV+N G+GDA+QNAK LE+++ +++ ITGQRPV TRA+ +IA+FKIR+G P+G+ VTLR MY+FLDRLIN+ LPR RDF+GV+P SFDG GNY++G++EQ +FPEI YD++ + R ++ +TD+E R Sbjct: 4 RLQILYNTVIVPKLQKELGYTNIHQVPRLEKIVINRGLGDASQNAKALESSIAEISAITGQRPVITRAKKAIASFKIRKGMPVGLMVTLRRERMYAFLDRLINIALPRIRDFRGVSPKSFDGRGNYTLGIREQLIFPEINYDSVDQIRGMDISIVTTAETDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CYAP8 (50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 8801) GN=rplE PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.717e-48 Identity = 93/165 (56.36%), Postives = 126/165 (76.36%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEAR 672 RLK Y + IVP L E+FSY N H+VPK+ KI VN G+G+A+QNAK LE+++N+L+ ITGQ+PV TRA+ +IA FKIR+G P+G+ VTLR + MY+FLDRLINL LPR RDF+G++ SFDG GNYS+G++EQ +FPEI YD + + R + + +TD+E R Sbjct: 4 RLKQVYQDTIVPKLTEQFSYKNPHEVPKVVKITVNRGLGEASQNAKALESSINELSTITGQKPVVTRAKKAIAGFKIRQGMPVGVMVTLRSDRMYAFLDRLINLALPRIRDFRGISAKSFDGRGNYSLGIREQLIFPEIDYDTIDQIRGMDVSIITTAQTDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_SYNJB (50S ribosomal protein L5 OS=Synechococcus sp. GN=rplE PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.854e-48 Identity = 92/165 (55.76%), Postives = 129/165 (78.18%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPRE*MFAL-HNRKTDKEAR 672 RL+ Y IVP L++E YTNIHQVP++EKIV+N G+G+A+QNAK LE+++ +++ ITGQRPV TRA+ +IA+FKIR+G P+G+ VTLR MY+FLDRLIN+ LPR RDF+GV+P +FDG GNY++G++EQ +FPEI YD++ + R ++ KTD+E R Sbjct: 4 RLQILYNTVIVPKLQKELGYTNIHQVPRLEKIVINRGLGEASQNAKALESSIAEISAITGQRPVITRAKKAIASFKIRKGMPVGLMVTLRRERMYAFLDRLINVALPRIRDFRGVSPKAFDGRGNYTLGIREQLIFPEINYDSVDQLRGMDISIVTTAKTDEEGR 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CHLAD (50S ribosomal protein L5 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplE PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.854e-48 Identity = 91/150 (60.67%), Postives = 119/150 (79.33%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 T RL+ Y +++VP L EEF + +I QVP++ KIVVN G+G+A QNAK +EAA+ND+A ITGQ+PV TRA+ S+A+FK+R G P+G+ VTLRG+ MY FLDRL +L LPR RDF+GV+ +SFDG GNYSIG+KEQ VFP+I YD + K R Sbjct: 2 TVRLREKYYKEVVPALMEEFKFKSIMQVPRLVKIVVNVGVGEAVQNAKAIEAAVNDVAAITGQKPVVTRAKKSVASFKLRAGMPIGVMVTLRGDRMYDFLDRLCSLALPRIRDFRGVSRSSFDGRGNYSIGLKEQIVFPDIDYDKIDKIR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_GEOKA (50S ribosomal protein L5 OS=Geobacillus kaustophilus GN=rplE PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.340e-48 Identity = 93/166 (56.02%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK YL ++VP L +F+Y +I QVPKIEKIV+N G+GDA QN K L++A+ +L LI GQRPV TRA+ SIA F++R+G P+G VTLRG MY FLD+LI++ LPR RDF+GV+ SFDG GNY++G+KEQ +FPEI YD + K R + + TD+EAR+ Sbjct: 3 RLKEKYLNEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTANTDEEARE 168 The following BLAST results are available for this feature:
BLAST of FC869145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869145 ID=FC869145; Name=FC869145; organism=Citrus clementina; type=EST; length=685bpback to top |