FC869145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_DESHY (50S ribosomal protein L5 OS=Desulfitobacterium hafniense (strain Y51) GN=rplE PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.081e-47 Identity = 88/166 (53.01%), Postives = 125/166 (75.30%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK + +I P L+++F+Y N+ Q+PK+EK+V+N G+G+A QN+K ++AA+ DL+ ITGQ+PV TRA+ SIA FK+R G P+G VTLRG+ MY F+DRL+N+ LPR RDF GV+ +FDG GNY++G+KEQ +FPEI YD + K R + + KTD+EAR+ Sbjct: 3 RLKDKFSNEIAPALQQKFNYKNVMQIPKLEKVVINVGVGEAIQNSKAIDAAVGDLSKITGQKPVVTRAKKSIAAFKLRTGMPIGTKVTLRGDRMYEFVDRLMNVALPRVRDFHGVSDKAFDGRGNYTLGIKEQLIFPEIEYDKIDKVRGMDIIFVTTAKTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_DESHD (50S ribosomal protein L5 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rplE PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.081e-47 Identity = 88/166 (53.01%), Postives = 125/166 (75.30%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK + +I P L+++F+Y N+ Q+PK+EK+V+N G+G+A QN+K ++AA+ DL+ ITGQ+PV TRA+ SIA FK+R G P+G VTLRG+ MY F+DRL+N+ LPR RDF GV+ +FDG GNY++G+KEQ +FPEI YD + K R + + KTD+EAR+ Sbjct: 3 RLKDKFSSEIAPALQQKFNYKNVMQIPKLEKVVINVGVGEAIQNSKAIDAAVGDLSKITGQKPVVTRAKKSIAAFKLRTGMPIGTKVTLRGDRMYEFVDRLMNVALPRVRDFHGVSDKAFDGRGNYTLGIKEQLIFPEIEYDKIDKVRGMDIIFVTTAKTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_BREBN (50S ribosomal protein L5 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplE PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.081e-47 Identity = 90/166 (54.22%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK Y +IVP L +F+YT+I QVPK+EKI++N G+G+A NAK L+ A+ DL +I GQ+PV T+A+ SIA FK+REG P+G VTLRG MY FLD+L+N+ LPR RDF+G++ +FDG GNY++G+KEQ +FPEI YD + K R + + + KTD+EAR+ Sbjct: 4 RLKEKYTSEIVPSLMSKFNYTSIMQVPKVEKIIINMGVGEAVANAKSLDTAIEDLQIIAGQKPVVTKAKKSIAGFKLREGMPIGAKVTLRGERMYHFLDKLMNVSLPRVRDFRGISSKAFDGRGNYTLGLKEQLIFPEIEYDKIDKVRGMDIVVVTSAKTDEEARE 169
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_GEOSW (50S ribosomal protein L5 OS=Geobacillus sp. (strain WCH70) GN=rplE PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.845e-47 Identity = 92/166 (55.42%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK YL+++ P L +F+Y +I QVPKIEKIV+N G+GDA QN K L++A+ +L LI GQ+PV TRA+ SIA F++R G P+G VTLRG MY FLD+LI++ LPR RDF+GV+ SFDG GNY++G+KEQ +FPEI YD + K R + + KTD+EAR+ Sbjct: 3 RLKEKYLKEVTPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQKPVVTRAKKSIAGFRLRAGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTAKTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_BACST (50S ribosomal protein L5 OS=Bacillus stearothermophilus GN=rplE PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47 Identity = 91/166 (54.82%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK Y++++VP L +F+Y +I QVPKIEKIV+N G+GDA QN K L++A+ +L LI GQRPV TRA+ SIA F++R+G P+G VTLRG MY FLD+LI++ LPR RDF+GV+ +FDG GNY++G+KEQ +FPEI YD + K R + + TD+EAR+ Sbjct: 3 RLKEKYVKEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKKAFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTANTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_EUBR3 (50S ribosomal protein L5 OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=rplE PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.146e-47 Identity = 92/166 (55.42%), Postives = 122/166 (73.49%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RL+ Y +I + ++F Y N ++PK++KIVVN G+G+A +NAK LEAA+ D+ ITGQ+ V T+A+N+IA FKIREG P+G VTLRG MY F DRLINL LPR RDF+GVNPN+FDG GNY++G+KEQ +FPEI YD + K R + + KTD+EAR+ Sbjct: 3 RLREQYENEIKDAMIKKFGYKNAMEIPKLDKIVVNMGVGEAKENAKVLEAAVKDMEAITGQKAVTTKAKNAIANFKIREGMPIGCKVTLRGEKMYEFADRLINLALPRVRDFRGVNPNAFDGRGNYALGIKEQIIFPEIEYDKVDKVRGMDIIFVTTAKTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CHLSY (50S ribosomal protein L5 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplE PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.146e-47 Identity = 90/150 (60.00%), Postives = 118/150 (78.67%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 T RL+ Y +++VP L EEF + +I QVP++ KIVVN G+G+A QNAK +EAA+NDLA ITGQ+PV TRA+ S+A+FK+R G P+G VTLRG+ MY FLDRL +L LPR RDF+GV+ +SFDG GNYS+G++EQ VFP+I YD + K R Sbjct: 2 TVRLREKYQKEVVPALMEEFKFKSIMQVPRLVKIVVNVGVGEAVQNAKAIEAAVNDLATITGQKPVVTRAKKSVASFKLRAGMPIGAMVTLRGDRMYDFLDRLCSLALPRIRDFRGVSRSSFDGRGNYSLGLREQIVFPDIDYDKIDKIR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CHLAA (50S ribosomal protein L5 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplE PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.146e-47 Identity = 90/150 (60.00%), Postives = 118/150 (78.67%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 T RL+ Y +++VP L EEF + +I QVP++ KIVVN G+G+A QNAK +EAA+NDLA ITGQ+PV TRA+ S+A+FK+R G P+G VTLRG+ MY FLDRL +L LPR RDF+GV+ +SFDG GNYS+G++EQ VFP+I YD + K R Sbjct: 2 TVRLREKYQKEVVPALMEEFKFKSIMQVPRLVKIVVNVGVGEAVQNAKAIEAAVNDLATITGQKPVVTRAKKSVASFKLRAGMPIGAMVTLRGDRMYDFLDRLCSLALPRIRDFRGVSRSSFDGRGNYSLGLREQIVFPDIDYDKIDKIR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_GEOTN (50S ribosomal protein L5 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplE PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.109e-47 Identity = 91/166 (54.82%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK Y +++VP L +F+Y +I QVPKIEKIV+N G+GDA QN K L++A+ +L LI GQRPV TRA+ SIA F++R+G P+G VTLRG MY FLD+LI++ LPR RDF+GV+ +FDG GNY++G+KEQ +FPEI YD + K R + + TD+EAR+ Sbjct: 3 RLKEKYTKEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKKAFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTANTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_PSEAK (50S ribosomal protein L5, chloroplastic OS=Pseudendoclonium akinetum GN=rpl5 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.367e-47 Identity = 92/150 (61.33%), Postives = 117/150 (78.00%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 T RLK + EKI P L E+ Y N HQVP IEKIV+N G+G+A+QN K LE+++N+L LI GQR V TR++ +IA FK+RE P+G+AVTLRG+ MY+FLDRLINL LPR RDFQG+NP SFDG GNYS+G++EQ +FPEI YD + + R Sbjct: 2 TERLKVVFQEKIAPKLIEKNRYKNKHQVPVIEKIVINRGLGNASQNTKILESSLNELTLIAGQRGVLTRSKKAIAAFKLREKTPVGVAVTLRGDRMYAFLDRLINLALPRIRDFQGINPKSFDGLGNYSLGLEEQLMFPEIDYDKIDQIR 151 The following BLAST results are available for this feature:
BLAST of FC869145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869145 ID=FC869145; Name=FC869145; organism=Citrus clementina; type=EST; length=685bpback to top |