FC869145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_OLTVI (50S ribosomal protein L5, chloroplastic OS=Oltmannsiellopsis viridis GN=rpl5 PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.367e-47 Identity = 89/148 (60.14%), Postives = 120/148 (81.08%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 R K YL+ IVP L++EF Y N HQVP+I+KIV+N G+GDA+QNAK L++++N+L++I GQR V TR++ +IA FK+R+ +GI+VTLRG+ MYSFLDRLINL LPR RDFQG++P SFDG GNYS+G++EQ +FPEI YD + + R Sbjct: 4 RFKELYLQTIVPKLKDEFGYKNSHQVPEIKKIVINRGLGDASQNAKILDSSLNELSIIAGQRGVVTRSKKAIAGFKLRDKMAVGISVTLRGDRMYSFLDRLINLALPRIRDFQGISPKSFDGCGNYSLGLEEQLMFPEIDYDKIDQVR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_DICT6 (50S ribosomal protein L5 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplE PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.009e-47 Identity = 92/165 (55.76%), Postives = 121/165 (73.33%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 LK Y++++VP + ++F Y N VPKIEKIVVN G+ +A QN +EAA DLA+ITGQRP+ +AR SIA F +R+G P+G+ VTLRG MY+FL +LINL LPR RDF GV+PNSFDG GNYS+G+KEQ VFPEI YD + + R + + KTD+EA++ Sbjct: 4 LKQKYIQEVVPAMMKKFGYKNPMAVPKIEKIVVNIGVSEAVQNPGAIEAAARDLAIITGQRPIVRKARKSIANFHLRKGMPIGVKVTLRGERMYAFLYKLINLALPRVRDFSGVSPNSFDGRGNYSLGLKEQLVFPEIEYDKIDRIRGMDITIVTTAKTDEEAKE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CLOAB (50S ribosomal protein L5 OS=Clostridium acetobutylicum GN=rplE PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.009e-47 Identity = 88/166 (53.01%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK Y ++++P L E+F Y NI +VPK+EKIV+N G+G+A +N K LE+A+ D+ LI+GQ+P+ TRA+ S+A FKIRE P+G VTLR N M+ F D+L+N+ LPR RDF+GV+ SFDG GNY++G+KEQ +FPE+ YD + K R + + N KTD+EAR+ Sbjct: 4 RLKEKYEKEVIPALMEKFQYKNIMEVPKLEKIVINMGVGEAKENQKVLESAVADMQLISGQKPILTRAKKSVANFKIRENMPIGCKVTLRKNKMFEFADKLMNVALPRVRDFRGVSSKSFDGRGNYALGIKEQLIFPEVEYDKIDKVRGMDVIFVTNAKTDEEARE 169
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_RHDSA (50S ribosomal protein L5, chloroplastic OS=Rhodomonas salina GN=rpl5 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.009e-47 Identity = 87/147 (59.18%), Postives = 118/147 (80.27%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 LKT Y EK+VPLL E F Y NIH+VPKI KI +N G+G+A++N K LE+++ +LA+I+GQ+PV T+A+ S+A FKIR+G P+GIAVTLR MMY+FL+RLI+L LPR RDF+G++ FDG GNY++G+KEQ +FPEI YD + + R Sbjct: 5 LKTYYKEKVVPLLMETFEYKNIHEVPKITKITINRGLGEASKNNKALESSVQELAIISGQQPVITKAKKSVAGFKIRDGMPVGIAVTLRSKMMYAFLERLIHLSLPRIRDFKGISVQLFDGRGNYNLGLKEQLIFPEIEYDRIDQIR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_NEPOL (50S ribosomal protein L5, chloroplastic OS=Nephroselmis olivacea GN=rpl5 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.009e-47 Identity = 89/148 (60.14%), Postives = 116/148 (78.38%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLKT YL +VP LR++F + NIH+VP I+KIV+N G+GDA+QNAK L+ ++ +L I GQR V TR++ +IA FKIR+ P+GI+VTLRG MY+FLDRLINL LPR RDFQG++ SFDG GNYS+G+ EQ +FPEI YDA+ + R Sbjct: 4 RLKTFYLNSVVPKLRQQFHHRNIHEVPSIKKIVINRGLGDASQNAKLLDGSLQELTTIAGQRGVITRSKQAIAAFKIRQDMPVGISVTLRGERMYAFLDRLINLALPRIRDFQGMSTKSFDGQGNYSLGLNEQLMFPEINYDAIDQMR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_ROSS1 (50S ribosomal protein L5 OS=Roseiflexus sp. (strain RS-1) GN=rplE PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.154e-47 Identity = 92/148 (62.16%), Postives = 115/148 (77.70%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK Y ++VP L +EF Y ++ QVP+IEKIV+N G+G+A QN+K L+AA DLA I GQ+PV TRAR SIA FK+R+G P+G+ VTLRG M+SFLDRL+NL LPR RDF+GV+ SFDG GNYSIG++EQ VFPEI YD + K R Sbjct: 4 RLKEKYQTEVVPALMQEFRYRSVMQVPRIEKIVLNIGLGEAIQNSKALDAATADLAAIAGQKPVITRARKSIAAFKVRQGMPIGVMVTLRGPRMWSFLDRLMNLVLPRLRDFRGVSRRSFDGRGNYSIGLREQIVFPEIDYDKVDKLR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_MOOTA (50S ribosomal protein L5 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplE PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.196e-46 Identity = 89/166 (53.61%), Postives = 122/166 (73.49%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK YL++I L+ +F Y NI ++PK+EKIV+N G+ +A QN K ++ A+ DL ITGQ+PV T+A+ SIA FK+R+G +G VTLRG+ MY FLDRLIN+ LPR RDF GV+PNSFDG GNY++G++EQ +FPEI YD + K R + + K+D+EAR+ Sbjct: 3 RLKEKYLQEIRKALQAKFGYKNIMEIPKLEKIVINMGVSEATQNPKAIDNAVQDLMTITGQKPVVTKAKKSIAAFKLRQGTSIGCKVTLRGDRMYEFLDRLINVALPRVRDFHGVSPNSFDGRGNYTLGIREQLIFPEIEYDKIDKVRGMDIVMVTTAKSDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CLOPH (50S ribosomal protein L5 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=rplE PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.196e-46 Identity = 91/166 (54.82%), Postives = 121/166 (72.89%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK Y +I+ ++++F Y N Q+PK++KIV+N G+G+A NAK LEAA+ D+ +I GQ+ V T+AR S+A FK+REG +G VTLRG MY F DRLINL LPR RDF+GVNPN+FDG GNY++GVKEQ +FPEI YD + K R + + KTD+EAR+ Sbjct: 3 RLKEIYKNEIMAGMQKKFGYKNEMQIPKLDKIVINMGVGEAKDNAKALEAAVKDMEIIAGQKAVITKARKSVANFKLREGVAIGCKVTLRGEKMYEFADRLINLALPRVRDFRGVNPNAFDGRGNYALGVKEQLIFPEIEYDKVDKVRGMDVIFVTTAKTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_BACHD (50S ribosomal protein L5 OS=Bacillus halodurans GN=rplE PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.196e-46 Identity = 91/166 (54.82%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK Y ++IVP L E+F+Y+++ VPK+EKIVVN G+GDA QNAK L+ A+ +L ITGQ+P+ T+A+ SIA FK+REG P+G VTLRG MY FLD+LI++ LPR RDF+G++ +FDG GNY++GVKEQ +FPEI YD + K R + + TD+EAR+ Sbjct: 3 RLKEKYQKEIVPSLTEKFNYSSVMAVPKLEKIVVNMGVGDAVQNAKALDKAVEELTEITGQKPIITKAKKSIAGFKLREGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGISKKAFDGRGNYTLGVKEQLIFPEIDYDKVDKVRGMDVVIVTTASTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LYSSC (50S ribosomal protein L5 OS=Lysinibacillus sphaericus (strain C3-41) GN=rplE PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46 Identity = 88/166 (53.01%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK YL ++ P L +F Y ++ Q+PK+EKIV+N G+GDA QN+K L+AA+ +L +ITGQ+PV T+A+ SIA F++REG P+G VTLRG MY FLD+LI++ LPR RDF+GV+ +FDG GNY++GVKEQ +FPEI YD + K R + + +D+EAR+ Sbjct: 3 RLKEKYLNEVSPALMSKFGYKSVMQLPKVEKIVINMGVGDAVQNSKALDAAVEELTIITGQKPVVTKAKKSIAGFRLREGMPIGAKVTLRGERMYEFLDKLISISLPRVRDFRGVSKKAFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTANSDEEARE 168 The following BLAST results are available for this feature:
BLAST of FC869145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869145 ID=FC869145; Name=FC869145; organism=Citrus clementina; type=EST; length=685bpback to top |