FC869145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LISW6 (50S ribosomal protein L5 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplE PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46 Identity = 86/148 (58.11%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD + K R Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVR 150
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LISMO (50S ribosomal protein L5 OS=Listeria monocytogenes GN=rplE PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46 Identity = 86/148 (58.11%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD + K R Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVR 150
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LISMH (50S ribosomal protein L5 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=rplE PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46 Identity = 86/148 (58.11%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD + K R Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVR 150
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LISMF (50S ribosomal protein L5 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplE PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46 Identity = 86/148 (58.11%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD + K R Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVR 150
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LISMC (50S ribosomal protein L5 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplE PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46 Identity = 86/148 (58.11%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD + K R Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVR 150
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LISIN (50S ribosomal protein L5 OS=Listeria innocua GN=rplE PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46 Identity = 86/148 (58.11%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD + K R Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVR 150
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RK5_SCEOB (50S ribosomal protein L5, chloroplastic OS=Scenedesmus obliquus GN=rpl5 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46 Identity = 89/150 (59.33%), Postives = 117/150 (78.00%), Query Frame = 1 Query: 175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624 T RLK Y EKIVP ++F Y NIH+VP ++KIV+N GIGDA+QNAK LE + +L++I GQ+ V TR++ SIA FKIR+ P+G++VTLRG+ MY FLDRLI+L LPR RDFQG+NP SFD +GNYS+G++EQ +FPEI YD + + R Sbjct: 2 TQRLKKLYTEKIVPKFYKDFQYKNIHEVPSLKKIVINRGIGDASQNAKILETFLKELSIIAGQKGVITRSKKSIAGFKIRDKMPVGVSVTLRGDRMYGFLDRLIHLALPRVRDFQGINPKSFDKNGNYSLGLEEQLMFPEIEYDKIDQIR 151
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_SYNPX (50S ribosomal protein L5 OS=Synechococcus sp. (strain WH8102) GN=rplE PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.039e-46 Identity = 88/143 (61.54%), Postives = 115/143 (80.42%), Query Frame = 1 Query: 184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDAL 612 LK Y E I P L+++ S TNIH+VPK+ K+ VN G+G+AA NAK LEA++N+LA ITGQ+ V TRA+ +IA FKIR+G P+G AVTLRG+ MY+FL+RLINL LPR RDF+GV+P SFDG GNY++GV+EQ +FPEI +D + Sbjct: 3 LKKRYRETIQPKLQKDLSLTNIHEVPKVVKVTVNRGLGEAAANAKSLEASVNELAQITGQKVVVTRAKKAIAAFKIRQGMPIGCAVTLRGDRMYAFLERLINLALPRIRDFRGVSPKSFDGRGNYTLGVREQIIFPEISFDKI 145
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_DESRM (50S ribosomal protein L5 OS=Desulfotomaculum reducens (strain MI-1) GN=rplE PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.039e-46 Identity = 88/166 (53.01%), Postives = 121/166 (72.89%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK YL ++ P L ++F Y NI QVPK+EK+++N G+G+A QN+K ++AA+ DL ITGQRP+ T+A+ SIA FK+R G +G VTLRG MY F+DRL N+ LPR RDF+G++ SFDG GNY++G+KEQ +FPEI YD + K R + + KTD+EAR+ Sbjct: 3 RLKDKYLNEVQPNLMQKFGYKNIMQVPKLEKVIINIGLGEAVQNSKAVDAAVGDLMAITGQRPITTKAKKSIAAFKLRAGMTIGTKVTLRGERMYEFVDRLFNVALPRVRDFRGISDKSFDGRGNYTMGLKEQLIFPEIEYDKIDKVRGMDITFVTTAKTDEEARE 168
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_MACCJ (50S ribosomal protein L5 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplE PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.664e-46 Identity = 89/166 (53.61%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675 RLK +L +I P + ++F Y++I +VPKIEKIVVN GIGDA QN+K L++A+ +L ITGQ+P+ T+A+ SIATF++REG P+G VTLRG MY F D+L+N+ LPR RDF+G++ +FDG GNY++GVKEQ +FPEI YD + K R + + TD+EAR+ Sbjct: 3 RLKEKFLNEITPEMMKKFEYSSIMEVPKIEKIVVNMGIGDAVQNSKVLDSAVEELQAITGQKPMVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFFDKLVNVSLPRVRDFRGISNKAFDGRGNYTLGVKEQLIFPEIDYDKVSKTRGMDIVIVTTANTDEEARE 168 The following BLAST results are available for this feature:
BLAST of FC869145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869145 ID=FC869145; Name=FC869145; organism=Citrus clementina; type=EST; length=685bpback to top |