FC869145

Overview
NameFC869145
Unique NameFC869145
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LACLS (50S ribosomal protein L5 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rplE PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45
Identity = 86/168 (51.19%), Postives = 123/168 (73.21%), Query Frame = 1
Query:  175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            T RLK  Y  ++VP L E+F+YT+I  VPK++KIV+N G+GDA  N+K L+ A+ +LALI+GQ+P+ T+A+ S+A F++REG P+G  VTLRG  M+ FLD+L+ + LPR RDF GV+  +FDG GNY++GVKEQ +FPEI YD + K R   +  +    TD+E+R+
Sbjct:    2 TNRLKEKYTNEVVPALTEQFNYTSIMAVPKVDKIVINMGVGDAVNNSKNLDKAVAELALISGQKPLITKAKKSVAAFRLREGMPIGAKVTLRGERMFEFLDKLVTVSLPRVRDFHGVSNKAFDGRGNYTLGVKEQLIFPEINYDDVDKVRGMDIVIVTTANTDEESRE 169          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LACLM (50S ribosomal protein L5 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rplE PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45
Identity = 86/168 (51.19%), Postives = 123/168 (73.21%), Query Frame = 1
Query:  175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            T RLK  Y  ++VP L E+F+YT+I  VPK++KIV+N G+GDA  N+K L+ A+ +LALI+GQ+P+ T+A+ S+A F++REG P+G  VTLRG  M+ FLD+L+ + LPR RDF GV+  +FDG GNY++GVKEQ +FPEI YD + K R   +  +    TD+E+R+
Sbjct:    2 TNRLKEKYTNEVVPALTEQFNYTSIMAVPKVDKIVINMGVGDAVNNSKNLDKAVAELALISGQKPLITKAKKSVAAFRLREGMPIGAKVTLRGERMFEFLDKLVTVSLPRVRDFHGVSNKAFDGRGNYTLGVKEQLIFPEINYDDVDKVRGMDIVIVTTANTDEESRE 169          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_LACLA (50S ribosomal protein L5 OS=Lactococcus lactis subsp. lactis GN=rplE PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.012e-45
Identity = 86/168 (51.19%), Postives = 123/168 (73.21%), Query Frame = 1
Query:  175 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            T RLK  Y  ++VP L E+F+YT+I  VPK++KIV+N G+GDA  N+K L+ A+ +LALI+GQ+P+ T+A+ S+A F++REG P+G  VTLRG  M+ FLD+L+ + LPR RDF GV+  +FDG GNY++GVKEQ +FPEI YD + K R   +  +    TD+E+R+
Sbjct:    2 TNRLKEKYTNEVVPALTEQFNYTSIMAVPKVDKIVINMGVGDAVNNSKNLDKAVAELALISGQKPLITKAKKSVAAFRLREGMPIGAKVTLRGERMFEFLDKLVTVSLPRVRDFHGVSNKAFDGRGNYTLGVKEQLIFPEINYDDVDKVRGMDIVIVTTANTDEESRE 169          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_PROM2 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplE PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 88/147 (59.86%), Postives = 111/147 (75.51%), Query Frame = 1
Query:  184 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR 624
            LK  Y E I P L +E    NIHQVPK+ K+ VN G+G+AA N+K LEA++N++A ITGQ+ + TRA+ +IA FKIREG P+G  VTLRG+ MYSFL+R INL LPR RDF+GVNP SFDG GNY++GVKEQ +FPEI +D +   R
Sbjct:    3 LKNRYKESIRPKLLKELGLKNIHQVPKVVKVNVNRGLGEAASNSKALEASLNEMATITGQKALVTRAKKAIAGFKIREGMPIGCTVTLRGDRMYSFLERFINLALPRIRDFRGVNPKSFDGRGNYTVGVKEQLIFPEISFDKIDSIR 149          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_CLOBM (50S ribosomal protein L5 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rplE PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 90/166 (54.22%), Postives = 120/166 (72.29%), Query Frame = 1
Query:  181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            RL+  Y +++V  L ++F Y NI +VPK+EKIV+N G+G+A +N K LEAA+ DLA ITGQ+P+ T+A+ S+A FKIRE  PLG  VTLR   MY F D+LIN+ LPR RDF GV+  SFDG GNY+IG+KEQ +FPEI +D + K R   +  +   KTD+EAR+
Sbjct:    4 RLQEKYEKEVVSALMDKFGYKNIMEVPKLEKIVINMGVGEAKENQKALEAAVEDLAKITGQKPILTKAKKSVANFKIRENMPLGCKVTLRKQNMYEFADKLINVALPRVRDFSGVSSKSFDGRGNYAIGIKEQLIFPEIEFDKIDKIRGMDIIFVTTAKTDEEARE 169          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_BACHK (50S ribosomal protein L5 OS=Bacillus thuringiensis subsp. konkukian GN=rplE PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 89/166 (53.61%), Postives = 121/166 (72.89%), Query Frame = 1
Query:  181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            RLK  + ++I P L  +F+Y ++ QVPKIEKIV+N G+GDA  N+K L+ A+ +L  ITGQ+PV TRA+ SIA F++REG P+G  VTLRG  MY F D+L+++ LPR RDF+GV+  SFDG GNY++GVKEQ +FPEI YD + K R   +  +   KTD+EAR+
Sbjct:    3 RLKEKFQKEITPALVSKFNYKSVMQVPKIEKIVINTGVGDAVSNSKALDNAVEELTQITGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTAKTDEEARE 168          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_BACCZ (50S ribosomal protein L5 OS=Bacillus cereus (strain ZK / E33L) GN=rplE PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 89/166 (53.61%), Postives = 121/166 (72.89%), Query Frame = 1
Query:  181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            RLK  + ++I P L  +F+Y ++ QVPKIEKIV+N G+GDA  N+K L+ A+ +L  ITGQ+PV TRA+ SIA F++REG P+G  VTLRG  MY F D+L+++ LPR RDF+GV+  SFDG GNY++GVKEQ +FPEI YD + K R   +  +   KTD+EAR+
Sbjct:    3 RLKEKFQKEITPALVSKFNYKSVMQVPKIEKIVINTGVGDAVSNSKALDNAVEELTQITGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTAKTDEEARE 168          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_BACCR (50S ribosomal protein L5 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplE PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 89/166 (53.61%), Postives = 121/166 (72.89%), Query Frame = 1
Query:  181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            RLK  + ++I P L  +F+Y ++ QVPKIEKIV+N G+GDA  N+K L+ A+ +L  ITGQ+PV TRA+ SIA F++REG P+G  VTLRG  MY F D+L+++ LPR RDF+GV+  SFDG GNY++GVKEQ +FPEI YD + K R   +  +   KTD+EAR+
Sbjct:    3 RLKEKFQKEITPALVSKFNYKSVMQVPKIEKIVINTGVGDAVSNSKALDNAVEELTQITGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTAKTDEEARE 168          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_BACC4 (50S ribosomal protein L5 OS=Bacillus cereus (strain B4264) GN=rplE PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 89/166 (53.61%), Postives = 121/166 (72.89%), Query Frame = 1
Query:  181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            RLK  + ++I P L  +F+Y ++ QVPKIEKIV+N G+GDA  N+K L+ A+ +L  ITGQ+PV TRA+ SIA F++REG P+G  VTLRG  MY F D+L+++ LPR RDF+GV+  SFDG GNY++GVKEQ +FPEI YD + K R   +  +   KTD+EAR+
Sbjct:    3 RLKEKFQKEITPALVSKFNYKSVMQVPKIEKIVINTGVGDAVSNSKALDNAVEELTQITGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTAKTDEEARE 168          
BLAST of FC869145 vs. ExPASy Swiss-Prot
Match: RL5_BACC3 (50S ribosomal protein L5 OS=Bacillus cereus (strain 03BB102) GN=rplE PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45
Identity = 89/166 (53.61%), Postives = 121/166 (72.89%), Query Frame = 1
Query:  181 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPR-E*MFALHNRKTDKEARD 675
            RLK  + ++I P L  +F+Y ++ QVPKIEKIV+N G+GDA  N+K L+ A+ +L  ITGQ+PV TRA+ SIA F++REG P+G  VTLRG  MY F D+L+++ LPR RDF+GV+  SFDG GNY++GVKEQ +FPEI YD + K R   +  +   KTD+EAR+
Sbjct:    3 RLKEKFQKEITPALVSKFNYKSVMQVPKIEKIVINTGVGDAVSNSKALDNAVEELTQITGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTAKTDEEARE 168          
The following BLAST results are available for this feature:
BLAST of FC869145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL5_LACLS1.012e-4551.1950S ribosomal protein L5 OS=Lactococcus lactis sub... [more]
RL5_LACLM1.012e-4551.1950S ribosomal protein L5 OS=Lactococcus lactis sub... [more]
RL5_LACLA1.012e-4551.1950S ribosomal protein L5 OS=Lactococcus lactis sub... [more]
RL5_PROM21.322e-4559.8650S ribosomal protein L5 OS=Prochlorococcus marinu... [more]
RL5_CLOBM1.322e-4554.2250S ribosomal protein L5 OS=Clostridium botulinum ... [more]
RL5_BACHK1.322e-4553.6150S ribosomal protein L5 OS=Bacillus thuringiensis... [more]
RL5_BACCZ1.322e-4553.6150S ribosomal protein L5 OS=Bacillus cereus (strai... [more]
RL5_BACCR1.322e-4553.6150S ribosomal protein L5 OS=Bacillus cereus (strai... [more]
RL5_BACC41.322e-4553.6150S ribosomal protein L5 OS=Bacillus cereus (strai... [more]
RL5_BACC31.322e-4553.6150S ribosomal protein L5 OS=Bacillus cereus (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31009A05EF AbioticL1 Citrus clementina cDNA clone C31009A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869145 ID=FC869145; Name=FC869145; organism=Citrus clementina; type=EST; length=685bp
TGTCCTTCGCTGTTACACTCCTCTGCGTCGTCGTTTCACGGCCGATTCCC
CGCTCTCTCATCTTCATCATATGTACGGCCCACATATCCAAACCCTATAA
ATGTGAATGGGGTGGTCTCGGTGAAGGCGGCGGCTGGAGGCATTGTGTTG
GTGGAGAAATCCGAAGCAGAGAAGACCGGACGGCTCAAAACCACGTATCT
CGAAAAGATTGTTCCTTTGCTCAGAGAAGAGTTTTCCTATACTAACATTC
ACCAGGTTCCGAAGATTGAGAAGATTGTTGTGAATTGTGGTATTGGAGAT
GCTGCTCAGAATGCAAAAGGCCTGGAGGCGGCAATGAATGACTTGGCACT
CATTACAGGTCAGAGACCTGTAAAGACGCGAGCAAGGAATTCCATTGCCA
CCTTCAAGATCAGGGAAGGCGAACCACTTGGAATTGCTGTCACACTCAGA
GGAAATATGATGTACTCATTTCTAGACCGTCTTATTAATTTGGGGCTTCC
TAGAACAAGGGATTTCCAAGGTGTGAATCCCAATAGCTTTGATGGACATG
GGAATTACAGCATTGGTGTTAAAGAACAGAGTGTTTTCCCGGAGATCAGG
TATGATGCTCTTGGCAAGCCCAGGGAATAGATGTTTGCATTACACAACCG
CAAAACTGATAAAGAAGCCAGAGACTTTTGGCTCT
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