FC869150
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_SERMA (Ribulose-phosphate 3-epimerase OS=Serratia marcescens GN=rpe PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31 Identity = 69/136 (50.74%), Postives = 95/136 (69.85%), Query Frame = 3 Query: 288 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 +++PSILSA+FA+LGE V AG D +H DVMD +VPN+TIGP+V +ALR P+DVHLM+ ++ VPDF KAGA +S H E S H+ RT+ IK+ G KAG+V NPAT LS ++ V+D +D++L+ Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAPIDVHLMVKPVDRIVPDFAKAGASYISFHPEASE--HVDRTIQLIKEHGCKAGLVFNPATPLSYLDYVMDKIDVILL 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_BUCAI (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpe PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.556e-30 Identity = 64/135 (47.41%), Postives = 97/135 (71.85%), Query Frame = 3 Query: 291 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 ++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+++++LR P+DVHLM+ + +P F KAGA ++ H E +T+H+ RTLN IK+ G KAG+ NPAT L+ ++ +L+ +DL+L+ Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPIDVHLMVKPVDNLIPQFAKAGATFITFHPE--ATLHIERTLNLIKENGCKAGLAFNPATPLNFLDYILEKLDLILL 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_SHIFL (Ribulose-phosphate 3-epimerase OS=Shigella flexneri GN=rpe PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30 Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3 Query: 288 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+ Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILL 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_ECOLI (Ribulose-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=rpe PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30 Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3 Query: 288 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+ Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILL 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_ECOL6 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O6 GN=rpe PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30 Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3 Query: 288 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+ Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILL 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_ECO57 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O157:H7 GN=rpe PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30 Identity = 67/136 (49.26%), Postives = 94/136 (69.12%), Query Frame = 3 Query: 288 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D +D++L+ Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILL 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_HAEIN (Ribulose-phosphate 3-epimerase OS=Haemophilus influenzae GN=rpe PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.931e-29 Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = 3 Query: 288 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 +++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP V ALR P+DVHLM+ ++ +PDF KAGA+ ++ H E S H+ R+L I+D G K+G+V NPA LS ++ VLD VD+VL+ Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSE--HIDRSLQLIRDCGCKSGLVFNPAMPLSYLDYVLDKVDVVLL 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_TREPA (Ribulose-phosphate 3-epimerase OS=Treponema pallidum GN=rpe PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.677e-28 Identity = 60/134 (44.78%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 291 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 ++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G V+ LR T LP DVHLM+ P + DF++AGAD ++ H E + +H HR ++ I+ G K G+ L P+T ++A+ VL VDLVL+ Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFDVHLMVSRPADLIEDFVQAGADFLTFHIE--AEVHAHRLIHAIRGRGVKVGISLVPSTPVAALSEVLPFVDLVLV 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_RHORU (Ribulose-phosphate 3-epimerase OS=Rhodospirillum rubrum GN=cbbE PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.265e-27 Identity = 64/136 (47.06%), Postives = 91/136 (66.91%), Query Frame = 3 Query: 285 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPLV ALRP T LP+DVHLM + + F +AGAD+++ H E S H+HR++ I+ G KAGV LNPA+ LS ++ +L+ +DLVLI Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASD--HVHRSVQMIRKRGLKAGVALNPASPLSLLDHILEDLDLVLI 138
BLAST of FC869150 vs. ExPASy Swiss-Prot
Match: RPE_STRCO (Ribulose-phosphate 3-epimerase OS=Streptomyces coelicolor GN=rpe PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.398e-26 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 3 Query: 291 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLI 692 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G VV++L TD PLD HLMI P++ P +++AGA V+ H E ++ R +I+ GA+A + L PAT + E +L +D++LI Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAA--PVRLAREIRAKGARASMALKPATPVEPYEDLLPELDMLLI 134 The following BLAST results are available for this feature:
BLAST of FC869150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869150 ID=FC869150; Name=FC869150; organism=Citrus clementina; type=EST; length=693bpback to top |