FC869162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 8.762e-48 Identity = 90/187 (48.13%), Postives = 119/187 (63.64%), Query Frame = 3 Query: 117 MVKMSLIFSLFVGLLMVGLVSSAKFDDLYQTSWAFNH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSD---GPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIP----FPKDQP 650 M + L + + + + F+D + W+ NH DG+ L+LDN +G GF +K Y FG S+++KLVGGDSAG VTA+YM S+ GP +E DFEFLGN TG+PY++QTNVY NG GNRE R LWFDPTK++HTYS+LWN Q+VF VD PIRV+ N + +P FP +P Sbjct: 1 MTALFLFMTALMASSSIAATPTQSFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDK--VPNNDFFPNQKP 185 HSP 2 Score: 29.6462 bits (65), Expect = 8.762e-48 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 635 PKGPAMGVYSSIWNADDW 688 P M ++SSIWNADDW Sbjct: 181 PNQKPMYLFSSIWNADDW 198
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.143e-47 Identity = 86/171 (50.29%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 147 FVGLLMVGL-VSSAKFDDLYQTSWAFNH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 F LL+ VS+A F+ +W + +G L L+LD SG+GF SK++YLFGK+ +QIKLV G+SAGTVT FY+ S+G +E DFEFLGN +G+PY + TNVY G G++EQ+ LWFDPT FHTYS+LWN ++++ VD+TPIR N E G+ FPK++P Sbjct: 9 FTTLLVAAFSVSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKP 179 HSP 2 Score: 32.3426 bits (72), Expect = 1.143e-47 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 635 PKGPAMGVYSSIWNADDW 688 PK M +Y+S+WNADDW Sbjct: 175 PKNKPMRMYASLWNADDW 192
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.687e-46 Identity = 91/181 (50.28%), Postives = 123/181 (67.96%), Query Frame = 3 Query: 114 SMVKMSLIFSLFVGLLMVGLVSSAKFDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 +M+ S I + M+ VS A F + +W Q +GD L L+LD SG+GF SK++YLFGK+ +QIKLV G+SAGTVTA+Y+ S G +E DFEFLGN +G+PY + TNV+ G G+REQ+ LWFDPT +FHTYS+LWN ++++F VD TPIR N+E +G FPK+QP Sbjct: 2 AMISYSTIVVALLASFMICSVS-ANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQP 181
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.576e-46 Identity = 84/179 (46.93%), Postives = 114/179 (63.69%), Query Frame = 3 Query: 123 KMSLIFSLFVGL-LMVGLVSSAKFDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 K L+ SL + + V S+ F + + +W +G L LD SG+GF SK +YLFGK+ +++KLV G+SAGTVTA+Y+SS G +E DFEFLGN TG PY + TNV+ G G+RE + LWFDPT +FHTY++ WN ++FLVD PIRV N E G+ +PK+QP Sbjct: 7 KQPLLLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQP 185 HSP 2 Score: 31.9574 bits (71), Expect = 3.576e-46 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 635 PKGPAMGVYSSIWNADDW 688 PK M +YSS+W ADDW Sbjct: 181 PKNQPMRIYSSLWEADDW 198
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 5.985e-46 Identity = 87/175 (49.71%), Postives = 126/175 (72.00%), Query Frame = 3 Query: 135 IFSLFVGLLMVGLVSSAKFDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 IF+L + + A F + ++ +W+ +H++ DG ++L LD +G GFASK KYLFG+VS++IKL+ GDSAGTVTAFYM+SD +E DFEFLGN +G+PY VQTN++ +G G+REQR++LWFDP+ ++HTY++LW+ + +VF VD+ PIR + N E K I +P QP Sbjct: 17 IFTLLTLMFIRVSARPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQP 191
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.497e-43 Identity = 75/137 (54.74%), Postives = 100/137 (72.99%), Query Frame = 3 Query: 240 GDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 G+ L L+LD +SG+GF S ++L+GKV +Q+KLV G+SAGTVT FY+ S G +E DFEFLGN +G PY + TNVY G G++EQ+ LWFDPT +FHTY ++WN ++V+F +D PIR N E G+PFPK QP Sbjct: 49 GNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQP 185 HSP 2 Score: 25.0238 bits (53), Expect = 3.497e-43 Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 635 PKGPAMGVYSSIWNADDW 688 PK M +Y+S+W A+ W Sbjct: 181 PKHQPMRLYASLWEAEHW 198
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.313e-42 Identity = 82/174 (47.13%), Postives = 110/174 (63.22%), Query Frame = 3 Query: 129 SLIFSLFVGLLMVGLVS-SAKFDDLYQTSWAFNHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQ 647 +L+F L L +G A F + +W +H+ +G L+L LD +G+ SK +LFG V + IKLV G+SAGTV A+Y+SS G H+E DFEFLGN TG+PY + TN+Y G GNREQ+ WF+PT FH Y++ WN +VV+ VD TPIRV N E +GI +P Q Sbjct: 8 TLMFVLAAALATLGRTFVEADFSKNFIVTWGKDHMFMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQ 181 HSP 2 Score: 28.1054 bits (61), Expect = 1.313e-42 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 635 PKGPAMGVYSSIWNADDW 688 P M V++S+WNA+DW Sbjct: 178 PNKQGMKVFASLWNAEDW 195
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.183e-40 Identity = 73/137 (53.28%), Postives = 95/137 (69.34%), Query Frame = 3 Query: 240 GDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 G L L+LD SG+GF S ++L+GK +Q+KLV G+SAGTVT FY+ S G +E DFEFLGN +G PY + TNVY G G++EQ+ LWFDPT FHTY + WN ++++F VD PIR N E +G+PFP QP Sbjct: 44 GKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQP 180 HSP 2 Score: 22.7126 bits (47), Expect = 1.183e-40 Identity = 7/18 (38.89%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 635 PKGPAMGVYSSIWNADDW 688 P M +Y+S+W A+ W Sbjct: 176 PTKQPMRLYASLWEAEHW 193
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.540e-40 Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 3 Query: 237 DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 DG L L+LD SG+GF S ++L+GK +Q+KLV G+SAGTVT FY+ S G +E DFEFLGN +G PY + TNVY G G++EQ+ LWFDPT FHTY + WN ++++F VD PIR N E G+PFP QP Sbjct: 48 DGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQP 185 HSP 2 Score: 22.7126 bits (47), Expect = 1.540e-40 Identity = 7/18 (38.89%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 635 PKGPAMGVYSSIWNADDW 688 P M +Y+S+W A+ W Sbjct: 181 PTKQPMRLYASLWEAEHW 198
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.007e-40 Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 3 Query: 237 DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 DG L L+LD SG+GF S ++L+GK +Q+KLV G+SAGTVT FY+ S G +E DFEFLGN +G PY + TNVY G G++EQ+ LWFDPT FHTY + WN ++++F VD PIR N E G+PFP QP Sbjct: 48 DGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQP 185 HSP 2 Score: 22.7126 bits (47), Expect = 2.007e-40 Identity = 7/18 (38.89%), Postives = 11/18 (61.11%), Query Frame = 2 Query: 635 PKGPAMGVYSSIWNADDW 688 P M +Y+S+W A+ W Sbjct: 181 PTRQPMRLYASLWEAEHW 198 The following BLAST results are available for this feature:
BLAST of FC869162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869162 ID=FC869162; Name=FC869162; organism=Citrus clementina; type=EST; length=689bpback to top |