FC869162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.685e-39 Identity = 80/181 (44.20%), Postives = 109/181 (60.22%), Query Frame = 3 Query: 135 IFSLFVGLLMV-----------GLVSSAKFDDLYQTSWAFNHVQ--YDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFP 638 IFS+FV L + G+ F Y +W +HV + G+ + L +D SG GF SK Y G ++IK+ G++ G VTAFY++S G H+E DFEFLGN G+P +QTN+++NG GNRE+R LWF+PTK +HTY LLWN Q+VF VD PIRV+ N G+ +P Sbjct: 6 IFSVFVVTLWIIRVDARVFGGRGIEKFVTFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGGGHDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKN--ENGVSYP 184 HSP 2 Score: 25.7942 bits (55), Expect = 3.685e-39 Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 2 Query: 629 SLPKGPAMGVYSSIWNADDW 688 S P P M V +S+WN DDW Sbjct: 182 SYPSKP-MQVEASLWNGDDW 200
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.256e-39 Identity = 79/181 (43.65%), Postives = 120/181 (66.30%), Query Frame = 3 Query: 126 MSLIFSLFVGLLMVGLVSSAKFDDLYQTSWAFNHVQY---DGDT--LKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSS-DGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQP 650 +S+ ++ V L ++A F + + A +HV+ DG T + L LD SG+GF SK YLFG+ S+Q+KLVGG+SAGTVT+FY+SS +G H+E D EF+GN +G PY++ TNV+ NG G +E + LWFDPT +FHTY ++WN + ++F VD+ P+R T ++ + +P+ +P Sbjct: 7 LSVAAAVAVSWLAASSAAAAGFYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVR--TFKKYDDLAYPQSKP 185
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.579e-38 Identity = 79/173 (45.66%), Postives = 108/173 (62.43%), Query Frame = 3 Query: 126 MSLIFSLFVGLLMVGLVSSAKFDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFP 638 +S++F +F + FD Y +W +H+ G ++L++D SG+GF SKS Y G ++IKL DSAG VTAFY++S G H+E DFEFLGN G+P +QTNV+ NG G REQ+ WFDPT FHTY +LWN Q+VF VD+ PIRV N++ G+ +P Sbjct: 11 VSVLFLMFTANARARGRGAIDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGDTHDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP 183
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37 Identity = 78/156 (50.00%), Postives = 105/156 (67.31%), Query Frame = 3 Query: 177 SSAKFDDLYQTSWAFNHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFP 638 S FDD Y +W N+V G ++L+LD+ SG+GF SK+ Y G I+IK+ D++G VTAFY++S G H+E DFEFLGN G+ VQTNV+ NG GNREQ+L LWFDP+K+FHTY++LWN Q+V VD P+RV N +G+ +P Sbjct: 35 SKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGNTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP 189
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 6.297e-32 Identity = 71/169 (42.01%), Postives = 102/169 (60.36%), Query Frame = 3 Query: 174 VSSAKFDDLYQTSWAFNHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN---HNEFDFEFLGNTTGEPYLVQTNVYVNGVGNR-----EQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQPWV 656 V ++ FD ++T W H + + D + L LD +G+GF S Y G IKL G +AG T+ Y+S++ + H+E D EFLG T G+PY +QTNV+V G G+R E + LWFDPT++FH Y++LWN Q+VF VD+ PIR + N +++ I FP WV Sbjct: 34 VPTSPFDREFRTLWGSQHQRREQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTY-NRKNEAI-FPTRPMWV 200 HSP 2 Score: 25.7942 bits (55), Expect = 6.297e-32 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 650 MGVYSSIWNADDW 688 M VY SIW+A DW Sbjct: 198 MWVYGSIWDASDW 210
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.295e-30 Identity = 77/181 (42.54%), Postives = 103/181 (56.91%), Query Frame = 3 Query: 117 MVKMSLIFSLFVGLLMVGLVSSAKFDDLYQTSWAFNH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGN--REQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFP 638 +V MSL SL G + L +FD+ Y + + V DG +++L LD +G+GF S YL G S IKL SAG V AFY+S+ NH+E DFEFLGN G + +QTN+Y NG + RE+R +LWFDPT++FH YS+LW+ ++F VD PIR G FP Sbjct: 8 LVFMSLFTSLVSGFALQKL-PLIQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFP 187 HSP 2 Score: 21.557 bits (44), Expect = 4.295e-30 Identity = 6/13 (46.15%), Postives = 9/13 (69.23%), Query Frame = 2 Query: 650 MGVYSSIWNADDW 688 M +YS+IW+ W Sbjct: 191 MSLYSTIWDGSKW 203
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.853e-30 Identity = 75/181 (41.44%), Postives = 102/181 (56.35%), Query Frame = 3 Query: 117 MVKMSLIFSLFVGLLMVGLVSSAKFDDLYQTSWAFNH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYLVQTNVYVNGV--GNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFP 638 +V MSL L G + L ++ F++ Y + + V DG +++L LD +G+GF S YL G S IKL +AG V AFYMS+ NH+E DFEFLGN + + VQTN+Y NG RE+R +LWFDPT++FH YS+LW+ ++F VD PIR G FP Sbjct: 8 LVFMSLFSGLVSGFALQNLPITS-FEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP 187
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.898e-29 Identity = 64/150 (42.67%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 174 VSSAKFDDLYQTSWAFNHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN---HNEFDFEFLGNTTGEPYLVQTNVYVNGVGN-----REQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIR 599 V S F ++ W H + D + L + LD SG+GF S + G IKL G +AG +T+ Y+S++ + H+E D EFLG T G+PY +QTNVY+ G G+ RE + LWFDPTK+FH Y++LW+ R+++FLVD+ PIR Sbjct: 38 VGSLNFYKGFRNLWGPQHQRMDQNALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIR 187
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.927e-28 Identity = 71/180 (39.44%), Postives = 101/180 (56.11%), Query Frame = 3 Query: 144 LFVGLLMVGLVSSAKFDDLYQTSWAFNHVQYDGD----------TLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNR--EQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFP 638 +F+ +L + L SS+ F +L S+ + GD +++L LD Y+G+GF S + Y G S IKL +AG V AFY S+ H+E D EFLGN G+P+ QTN+Y NG +R E+R LWFDP+KEFH YS+LW +++F VD+ PIR + G +P Sbjct: 9 IFILILCLCLRSSSAFTNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYP 188 HSP 2 Score: 24.6386 bits (52), Expect = 2.927e-28 Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 650 MGVYSSIWNADDW 688 M +Y++IW+A DW Sbjct: 192 MALYATIWDASDW 204
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28 Identity = 65/140 (46.43%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 237 DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNR--EQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPK 641 D +++L LD Y+G+GF S S Y G S IKL G +AG V AFY S+ +H+E D EFLGN G+P+ QTN+Y NG NR E+R LWFDP+KEFH YS+LW +++F VD+ PIR E +P+ Sbjct: 58 DDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQ 197 The following BLAST results are available for this feature:
BLAST of FC869162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869162 ID=FC869162; Name=FC869162; organism=Citrus clementina; type=EST; length=689bpback to top |