FC869162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.638e-27 Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 3 Query: 249 LKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHT 608 L+L LD SG+GF S+ Y G +++IK S G +T+FY+ S H+E F+ LG G PYL+ TN+Y+ G G ++QR LWFDPTK++H+YS LWN Q+VF VD+TPIRV++ Sbjct: 45 LQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRSSRHDELCFQILGKN-GPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYS 163
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26 Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 177 SSAKFDDLYQTSWAFNHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGP---NHNEFDFEFLGNTTGEPYLVQTNVYVNGVGN--REQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTN 611 S ++ + + +++Q +G KL LD SGAG SK+KY +G S ++KL G ++G V AFY+S+ +H+E D E LG + + + +QTNVY NG RE++ WFDPT+ FH Y+L+WN VFLVD P+R N Sbjct: 39 SKIAIENGFSRRFGAHNIQVNGSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPN 188
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12 Identity = 43/141 (30.50%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 195 DLYQTSWAFNHVQYDGDTLKLNLDN----YSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYM---SSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPI 596 +++ W N+ +++ LKL +D Y+ + +K+ Y +G + +K + + G V++F+ SDG +E D EFLG T + VQ N Y NG G+ E L FD ++ FHTY W + + + VD T + Sbjct: 59 EMFNCRWTPNNDKFENGKLKLTIDRDGSGYTCGEYRTKNYYGYGMFQVNMKPI--KNPGVVSSFFTYTGPSDGTKWDEIDIEFLGYDTTK---VQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAV 194
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.787e-11 Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 198 LYQTSWAFNHVQYDGD-TLKLNL-----DNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNH----NEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVD 584 ++ +W N+V + D LKL+L + + + S + Y +G + +K + G V++F+ + GP+H +E D EFLG T + VQ N Y NGVG E+ ++L FD + FHTY+ W + + VD Sbjct: 53 MFNCTWRANNVNFTNDGKLKLSLTSPANNKFDCGEYRSTNNYGYGLYEVSMK--PAKNTGIVSSFFTYT-GPSHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKIINLGFDASTSFHTYAFDWQPGYIKWYVD 185
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 198 LYQTSWAFNHVQYDGD-TLKLNL-----DNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNH----NEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVD 584 ++ +W N+V + D LKL L + + A + S + Y +G + +K + G V++F+ + GP H +E D EFLG T + VQ N Y NGVG E+ + L FD +K FHTY+ W + + VD Sbjct: 52 VFNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMK--PAKNTGIVSSFFTYT-GPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVD 184
BLAST of FC869162 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 44/138 (31.88%), Postives = 66/138 (47.83%), Query Frame = 3 Query: 198 LYQTSWAFNHVQYDGDTLKLNLDNYSGAGFASKS-----KYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHN----EFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVD 584 ++ W + V + + L LD G + KS K FG ++++ + G V++F+ + GP+ N E D EFLG T + VQ N Y NGVG E +L FD +++FHTY W + F VD Sbjct: 59 VFNCVWKPSQVTFSNGKMILTLDREYGGSYPYKSGEYRTKSFFGYGYYEVRMKAAKNVGIVSSFFTYT-GPSDNNPWDEIDIEFLGKDTTK---VQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVD 192 The following BLAST results are available for this feature:
BLAST of FC869162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869162 ID=FC869162; Name=FC869162; organism=Citrus clementina; type=EST; length=689bpback to top |