FC869163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22 Identity = 58/135 (42.96%), Postives = 77/135 (57.04%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAV-IAEIVLVGGAEYYRITNG 680 WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH WAMLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A++VL+G E YR+ G Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGG 179
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 680 W+GPD +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+ WAMLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YRI G Sbjct: 12 WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 142
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 59/135 (43.70%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 680 WYG DR FL E P YL GE GDYG+D GLS P+ F++ + E+IHA WAMLGA G + PE K G G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+ G Sbjct: 52 WYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 182
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 58/135 (42.96%), Postives = 79/135 (58.52%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 680 WYG DR ++L G S P YL+GE PGDYG+D GLS P+ F+K + E+IH+ WAMLGA G + PE K G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ G Sbjct: 49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21 Identity = 58/135 (42.96%), Postives = 77/135 (57.04%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 680 WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH WAMLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G Sbjct: 21 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGG 151
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 60/138 (43.48%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNG 680 WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH WAMLGA G + PE +K G G EAVWFK G+ + L+Y G NLV A ++A ++VL+G E YR+ G Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNP---NLVHAQSILAIWACQVVLMGFVEGYRVGGG 179
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 59/135 (43.70%), Postives = 77/135 (57.04%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 680 WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH WAMLGA G + PE +K G G EAVWFK G+ + L+Y G I + AV A ++VL+G E YR+ G Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGG 179
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.389e-21 Identity = 57/132 (43.18%), Postives = 76/132 (57.58%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRI 671 WYGP+R +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH WAMLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR+ Sbjct: 51 WYGPNRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 178
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.389e-21 Identity = 62/136 (45.59%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 680 WYGPDR P+ L SE P YLTGE PGDYG+D +S P+ F+K + E+IH WAMLGA G + PE K G G EAVWFK GA + L+Y G I + A+ A ++VL+G E YR+ G Sbjct: 50 WYGPDR----PKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFG-EAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGG 180
BLAST of FC869163 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 59/136 (43.38%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 285 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHAGWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL 683 WYGPDR +L ++ P YL GE PGDYG+D GLS P+ F+K +A E+IH WAMLGA G I PE K+ E VWFK G+ + L+Y G + + AV+ ++VL+G E +RI NGL Sbjct: 47 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI-NGL 178 The following BLAST results are available for this feature:
BLAST of FC869163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869163 ID=FC869163; Name=FC869163; organism=Citrus clementina; type=EST; length=705bpback to top |