FC869185

Overview
NameFC869185
Unique NameFC869185
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP3_ARATH (FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplastic OS=Arabidopsis thaliana GN=FKBP13 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12
Identity = 41/97 (42.27%), Postives = 50/97 (51.55%), Query Frame = 3
Query:  249 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWD------IGIKTMKKGENAVFTIPPELAYGE-----SGSPPTIPPNATLQFDVELL 506
            G  ++ HY G L +G  FDSS +R  P  F +G G VIKGWD       GI  M  G      IPPELAYG+      G    IPP + L FD+E +
Sbjct:  109 GQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 205          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBA_BUCAP (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fkpA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12
Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 3
Query:  255 EVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 506
            E+ VHY G+L++GT+FDSS  R  P   TL   +VI GW  G+K +KKG      IPP L YG S     IP N+ L FD+ELL
Sbjct:  167 EITVHYKGSLINGTEFDSSYKRGKP--ITLMLKDVILGWQEGLKYIKKGGKIKLIIPPNLGYG-SNRINEIPANSILIFDIELL 247          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP3_CANGA (FK506-binding protein 3 OS=Candida glabrata GN=FPR3 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.307e-12
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 3
Query:  243 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 509
            + GD V + Y G L +G  FD +     PF F LG+G VIKGWD+G+  M  G      IP   AYG+  + P IP N+ L FDV+L+S
Sbjct:  349 KKGDRVGMRYIGKLKNGKVFDKNTS-GKPFVFKLGRGEVIKGWDVGVAGMSVGSERRIIIPAPYAYGKQ-ALPGIPANSELTFDVKLVS 435          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP4_YEAST (FK506-binding protein 4 OS=Saccharomyces cerevisiae GN=FPR4 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.013e-12
Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 3
Query:  243 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 509
            + G  V + Y G L +G  FD +  +  PF F LGQG VIKGWDIG+  M  G      IP   AYG+  + P IP N+ L FDV+L+S
Sbjct:  304 KKGTRVGMRYVGKLKNGKVFDKNT-KGKPFVFKLGQGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQ-ALPGIPANSELTFDVKLVS 390          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP6_DICDI (FK506-binding protein 6 OS=Dictyostelium discoideum GN=fkbp6 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 3
Query:  258 VEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 512
            V VHY G L +   FDSS  R++PF F +G  +VI   ++ I TMK G+ A        A+G+ G PP IPPN ++ + ++LLS+
Sbjct:  126 VTVHYEGYLSNQVLFDSSVQRNSPFTFQMGTKSVIDAIELSISTMKVGQEAEIVTTQRYAFGKLGLPPFIPPNVSVIYKIKLLSY 210          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP_STRCH (FK506-binding protein OS=Streptomyces chrysomallus GN=fkbP PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12
Identity = 39/89 (43.82%), Postives = 50/89 (56.18%), Query Frame = 3
Query:  249 GDEVEVHYTGTLLD-GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGS-PPTIPPNATLQFDVELLS 509
            G  V VHY G     G +FD+S +R TP +F LG G VI GWD G++ MK G      IP  LAYG+ G+    I P  TL F  +L++
Sbjct:   35 GQTVSVHYVGVAFSTGEEFDASWNRGTPLQFQLGAGQVISGWDQGVQGMKVGGRRELIIPAHLAYGDRGAGGGKIAPGETLIFVCDLVA 123          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBA_BUCAI (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fkpA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 3
Query:  255 EVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 506
            ++ VHY GTL++G +FD+S  R  P    L   +VI GW  G+K +KKG      IPP LAYG +     IP N+TL FD+ELL
Sbjct:  155 KITVHYKGTLINGLEFDNSYKRGRPVSLRLK--DVILGWKEGLKYIKKGGKIKLVIPPNLAYG-TEEVNGIPANSTLIFDIELL 235          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKB12_VICFA (Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 3
Query:  240 PENGDEVEVHYTGTLLDGT---QFDSSRDRS-TPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPP-TIPPNATLQFDVELL 506
            P  G  V VH TG   +G    +F S++D    PF F +GQG+VIKGWD G+  M+ GE A     P+ AYG  G P   I PN+ L+F++E+L
Sbjct:   16 PSRGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVLGMQLGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVL 109          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP3_KLULA (FK506-binding protein 3 OS=Kluyveromyces lactis GN=FPR3 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.767e-12
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 3
Query:  243 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 509
            + G +V + Y G L +G  FD +     PF F LG+G VIKGWDIG+  M  G      IP   AYG+  + P IP N+ L FDV+L+S
Sbjct:  330 KKGSKVGMRYIGKLKNGKVFDKNTS-GKPFVFNLGRGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQ-ALPGIPANSELTFDVKLVS 416          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP3_DICDI (FK506-binding protein 3 OS=Dictyostelium discoideum GN=fkbp3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11
Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 3
Query:  237 TPENGDEVEVHYTGTLLDGTQFDSSRDRST-PFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 509
            T   GD + + Y G   DGT FDSS       F FT+G+  VI G +IG   + +GE     IP +LAYGE+G    IPP   + FD+E++S
Sbjct:   40 TASIGDYISLKYVGKFEDGTVFDSSEIHGGFSFNFTIGERKVIPGLEIGTINICEGEKRSIKIPYQLAYGENGIENAIPPRTDIYFDLEVVS 131          
The following BLAST results are available for this feature:
BLAST of FC869185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKBP3_ARATH1.766e-1242.27FKBP-type peptidyl-prolyl cis-trans isomerase 3, c... [more]
FKBA_BUCAP1.766e-1248.81FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBP3_CANGA2.307e-1243.82FK506-binding protein 3 OS=Candida glabrata GN=FPR... [more]
FKBP4_YEAST3.013e-1244.94FK506-binding protein 4 OS=Saccharomyces cerevisia... [more]
FKBP6_DICDI5.140e-1241.18FK506-binding protein 6 OS=Dictyostelium discoideu... [more]
FKBP_STRCH6.712e-1243.82FK506-binding protein OS=Streptomyces chrysomallus... [more]
FKBA_BUCAI6.712e-1246.43FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKB12_VICFA6.712e-1243.62Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=... [more]
FKBP3_KLULA8.767e-1243.82FK506-binding protein 3 OS=Kluyveromyces lactis GN... [more]
FKBP3_DICDI1.145e-1141.30FK506-binding protein 3 OS=Dictyostelium discoideu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31009D11EF AbioticL1 Citrus clementina cDNA clone C31009D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869185 ID=FC869185; Name=FC869185; organism=Citrus clementina; type=EST; length=654bp
TCGCCGGGGGCACGCATTTAGCATTTCCTCAATCAGCAGCTCTCTCTCTC
TCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGATTTTGA
TATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGACGATG
CTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAGGTTTG
AAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAAAATGG
CGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTACTCAGT
TTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTGGTCAA
GGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAGAAAGG
TGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGAATCTG
GTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATGTTGAA
TTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGGATTAT
TAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAAATCCCAGGACCTTG
ATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGTTGTT
GGAA
back to top