Homology
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2)
HSP 1 Score: 332.028 bits (850), Expect = 1.854e-90
Identity = 165/193 (85.49%), Postives = 172/193 (89.12%), Query Frame = 3
Query: 135 GRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
GRI+MRK+A+K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAI A QVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPE V+ + RLAM
Sbjct: 25 GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM 217
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1)
HSP 1 Score: 332.028 bits (850), Expect = 1.854e-90
Identity = 165/211 (78.20%), Postives = 180/211 (85.31%), Query Frame = 3
Query: 81 FVGKAVNLAPSGNELGNGGRISMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAI A QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPLGLA DPE V+ + RLAM
Sbjct: 13 FAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAM 223
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1)
HSP 1 Score: 331.257 bits (848), Expect = 3.162e-90
Identity = 166/212 (78.30%), Postives = 182/212 (85.85%), Query Frame = 3
Query: 99 NLAPSGNEL-GNGG-----RISMRK-TASKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
++ P N+L G GG R++MRK T KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAI ACQV+LMGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+ V+ + RLAM
Sbjct: 23 SVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAM 234
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)
HSP 1 Score: 331.257 bits (848), Expect = 3.162e-90
Identity = 166/212 (78.30%), Postives = 182/212 (85.85%), Query Frame = 3
Query: 99 NLAPSGNEL-GNGG-----RISMRK-TASKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
++ P N+L G GG R++MRK T KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAI ACQV+LMGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+ V+ + RLAM
Sbjct: 23 SVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAM 234
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1)
HSP 1 Score: 329.331 bits (843), Expect = 1.202e-89
Identity = 170/207 (82.13%), Postives = 179/207 (86.47%), Query Frame = 3
Query: 87 GKAVNLAPSGNELGNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
G+A+ LAPS ELG G R+SMRKTA K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAI A QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPE L V+ + RLAM
Sbjct: 15 GQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAM 212
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1)
HSP 1 Score: 317.005 bits (811), Expect = 6.171e-86
Identity = 154/196 (78.57%), Postives = 170/196 (86.73%), Query Frame = 3
Query: 123 LGN-GGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
LGN R++MR+T SKS S + WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAI ACQVVLMGAVEGYR+AGGPLGEVTDP+YPGGSFDPLGLADDP+ V+ + RLAM
Sbjct: 29 LGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAM 224
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)
HSP 1 Score: 316.62 bits (810), Expect = 8.060e-86
Identity = 154/184 (83.70%), Postives = 162/184 (88.04%), Query Frame = 3
Query: 156 TASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
T K SS SPW+GPD VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAI A QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+ PE V+ + RLAM
Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAM 184
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2)
HSP 1 Score: 316.235 bits (809), Expect = 1.053e-85
Identity = 149/177 (84.18%), Postives = 160/177 (90.40%), Query Frame = 3
Query: 126 GNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPE 656
GNGGR+SMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSILAI ACQVVLMGAVEGYR+ GGPLGE D LYPGG+FDPLGLA+DPE
Sbjct: 29 GNGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPE 203
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)
HSP 1 Score: 315.079 bits (806), Expect = 2.345e-85
Identity = 151/192 (78.65%), Postives = 167/192 (86.98%), Query Frame = 3
Query: 132 GGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
GGR+SMR+T + +S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAI ACQVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+ V+ + RLAM
Sbjct: 32 GGRVSMRRTVKSAPTS--IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAM 221
BLAST of FC869193 vs. ExPASy Swiss-Prot
Match:
CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)
HSP 1 Score: 311.997 bits (798), Expect = 1.985e-84
Identity = 152/190 (80.00%), Postives = 164/190 (86.32%), Query Frame = 3
Query: 138 RISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAI*ACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPELLLSSSVRN-QEWRLAM 704
R+ M SK+ SGS WYG DR YLGPFSG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDYLGNPSL+HAQSILAI ACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPE V+ + RLAM
Sbjct: 33 RVQMMAPKSKA-PSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 221
The following BLAST results are available for this feature:
BLAST of FC869193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 72
100 200 300 400 500 600 700 Expect = 1.85e-90 / Id = 85.49 Expect = 1.85e-90 / Id = 78.20 Expect = 3.16e-90 / Id = 78.30 Expect = 3.16e-90 / Id = 78.30 Expect = 1.20e-89 / Id = 82.13 Expect = 6.17e-86 / Id = 78.57 Expect = 8.06e-86 / Id = 83.70 Expect = 1.05e-85 / Id = 84.18 Expect = 2.35e-85 / Id = 78.65 Expect = 1.99e-84 / Id = 80.00 Sequence CB22_ORYSJ CB22_ARATH CB2A_PYRPY CB2A_PINSY CB22_SOYBN CB2_PHYPA CB21_PEA CB21_SILPR CB21_GOSHI CB23_POLMU
Match Name E-value Identity Description
CB22_ORYSJ 1.854e-90 85.49 Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB22_ARATH 1.854e-90 78.20 Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB2A_PYRPY 3.162e-90 78.30 Chlorophyll a-b binding protein 1A, chloroplastic ... [more]
CB2A_PINSY 3.162e-90 78.30 Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB22_SOYBN 1.202e-89 82.13 Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB2_PHYPA 6.171e-86 78.57 Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_PEA 8.060e-86 83.70 Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB21_SILPR 1.053e-85 84.18 Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB21_GOSHI 2.345e-85 78.65 Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB23_POLMU 1.985e-84 80.00 Chlorophyll a-b binding protein type 1 member F3, ... [more]
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