FC869199

Overview
NameFC869199
Unique NameFC869199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13
Identity = 56/161 (34.78%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  262 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +AL P + I  KL D   +SH+   FRF+     + LGL V   I   A +      + K  +R YTP S  +  G+F+L++K+Y +         G+MSQ+  SL  G  V+VKGP+  + Y               K + M+AGGTG TP+ QV  AIL
Sbjct:  647 VALIPREKIPCKLVDKKSISHDVRKFRFALPSEDQVLGLPVGKHIFLCAII------DDKLCMRAYTPTSTVDEVGYFELVVKIYFKGIVPKFPNGGQMSQYLDSLPLGAFVDVKGPLGHIEYQGRGNFLVHGKRKFAKKLAMLAGGTGITPVYQVMQAIL 801          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13
Identity = 55/161 (34.16%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  262 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +AL P + I  KL D   +SH+   FRF+     + LGL V   I   A +      + K  +R YTP S  +  G+F+L++K+Y +         G+MSQ+  S+  G  ++VKGP+  + Y               K + MIAGGTG TP+ QV  AIL
Sbjct:  642 VALIPREKIPCKLIDKQSISHDVRKFRFALPSEDQVLGLPVGKHIFLCAVI------DDKLCMRAYTPTSTIDEVGYFELVVKIYFKGIHPKFPNGGQMSQYLDSMPLGSFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQAIL 796          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13
Identity = 55/161 (34.16%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  262 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +AL P + I  KL D   +SH+   F+F+     + LGL V   I   A +      + K  +R YTP S  +  G F+L++K+Y +         G+MSQH  SL  G  ++VKGP+  + Y               K + MIAGGTG TP+ QV  +IL
Sbjct:  649 VALIPREKIPCKLVDKQSISHDVRKFKFALPSEDQVLGLPVGKHIFLCATV------DDKLCMRAYTPTSTVDEVGFFELVVKIYFKGVHPKFPNGGQMSQHLDSLPIGAFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQSIL 803          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: MCR1B_VANPO (NADH-cytochrome b5 reductase 2-B OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=MCR1B PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 48/162 (29.63%), Postives = 75/162 (46.30%), Query Frame = 1
Query:  202 YFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            YFS+ + +  + ++ +T          W+   L     +SH++  F F       + G+   S +L R        G     +RPYTP+S  E +G  + +IK  P G MS H  SLKP D V   GPI K  +  N    + ++  G+G TP+ Q+  +IL
Sbjct:   28 YFSTGSRLANEALHNKTFKGFKGPASTWVDLPLVKFEDLSHDTRKFTFKLPNDDDVSGISPLSFLLARPHGTWSLRG-----IRPYTPVSLPETQGVIEFVIKHVPNGGMSSHMFSLKPNDTVSFTGPIVKYEWKQNKFDSVTLLGAGSGITPLYQLMGSIL 184          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 63/181 (34.81%), Postives = 91/181 (50.28%), Query Frame = 1
Query:  217 NLVHLDQINEET---GPKIALN-PDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY-----PE----GKMSQHFASLKPG-DVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +L HL  I E T   G  IAL+ P + +  +L D   +SH+  LFRF+   S + LGL V   I   A +      + K  +R YTP S  +  G F+LL+KVY     P+    G M+Q+  SL+ G   ++VKGP+  + Y+              + + MI GG+G TPM QV  A+L
Sbjct:  630 SLSHLAPIREATKVAGAPIALSSPREKVPCRLVDKKELSHDVRLFRFALPSSDQVLGLPVGKHIFVCATI------DGKLCMRAYTPTSMVDEIGQFELLVKVYFRDEHPKFPNGGLMTQYLESLQVGSSYIDVKGPLGHVEYTGRGNFVINGKQRRARRLAMICGGSGITPMYQVIQAVL 804          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA2_ARATH (Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana GN=NIA2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 51/159 (32.08%), Postives = 75/159 (47.17%), Query Frame = 1
Query:  268 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +NP   +  +L +   +SH+   FRF+       LGL V   I   A +      N K  +R YTP S  +  G+F+L++K+Y           G MSQ+  SL  G  +E+KGP+  + Y           P     + M+AGGTG TP+ Q+  AIL
Sbjct:  657 VNPRAKVPVQLVEKTSISHDVRKFRFALPVEDMVLGLPVGKHIFLCATI------NDKLCLRAYTPSSTVDVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEYLGKGSFTVHGKPKFADKLAMLAGGTGITPVYQIIQAIL 809          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 55/161 (34.16%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  262 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +AL P + I  KL D   +S +   FRF+     + LGL V   I   A +      + K  +R YTP S  +  G+F+L++K+Y +         G+MSQ+  SL+ G  ++VKGP+  + Y               K + MIAGGTG TP+ QV  AIL
Sbjct:  642 VALIPREKIPCKLIDKQSISPDVRKFRFALPSEDQVLGLPVGKHIFLCAVI------DDKLCMRAYTPTSTIDEVGYFELVVKIYFKGIHPKFPNGGQMSQYLDSLQLGSFLDVKGPLGHIEYQGKGNFLVHGKQKFAKKLAMIAGGTGITPVYQVMQAIL 796          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 48/143 (33.57%), Postives = 68/143 (47.55%), Query Frame = 1
Query:  295 KLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPML 663
            KL     VSH+  LFRF+   P   LGL V   +   A +      + K  +R YTP S  +  G+F+LL+K+Y +         G MSQH  S++ G  +E+KGP+  + Y               + + M AGGTG TP L
Sbjct:  669 KLISKTSVSHDVRLFRFALPSPDQVLGLPVGKHVFVCATI------DDKLCMRAYTPTSTIDEVGYFELLVKIYFKGVEPKFPNGGLMSQHLESMELGSSIEIKGPLGHIEYMGRGTFSVHGKQKFARKLAMFAGGTGITPDL 805          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA2_HORVU (Nitrate reductase [NADH] (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 62/181 (34.25%), Postives = 90/181 (49.72%), Query Frame = 1
Query:  217 NLVHLDQINEET---GPKIALN-PDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY-----PE----GKMSQHFASLKPG-DVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +L HL  I E T   G  IAL+ P + +  +L D   +SH+  LFRF+   S + LGL V   I   A +      + K  +R YTP S  +  G F+LL+KVY     P+    G M+Q+  SL+ G   ++VKGP+  + Y+              + + MI G +G TPM QV  A+L
Sbjct:  627 SLSHLAPIREATKVAGAPIALSSPREKVPCRLVDKKELSHDVRLFRFALPSSDQVLGLPVGKHIFVCATI------DGKLCMRAYTPTSMVDEIGQFELLVKVYFRDEHPKFPNGGLMTQYLESLQVGSSSIDVKGPLGHVEYTGRGNFVINGKQRRARRLAMICGSSGITPMYQVIQAVL 801          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 1
Query:  268 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRA--PLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            L+   W    L    +VS ++ +FRF  D +++ LGL     ++ R   P+ ++A      ++R YTPIS    +G  D+LIK+Y +      GKM++   S+  G  V++KGPI K  Y          +    + + MI GG+G TP+ QV  AIL
Sbjct:  638 LDSRTWSKALLSSKTKVSWDTRIFRFKLDHASQTLGLPTGQHLMIRLRDPVTREA------IIRSYTPISQISEQGFCDVLIKIYADAPGREGGKMTKALDSIPCGHWVDMKGPIGKFEYLGKGVCSINGNERRVRSMKMICGGSGITPIYQVLRAIL 789          
The following BLAST results are available for this feature:
BLAST of FC869199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
NIA_PETHY1.743e-1334.78Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA2_TOBAC2.276e-1334.16Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA_SOLLC2.972e-1334.16Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
MCR1B_VANPO3.882e-1329.63NADH-cytochrome b5 reductase 2-B OS=Vanderwaltozym... [more]
NIA1_HORVU6.622e-1334.81Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
NIA2_ARATH1.129e-1232.08Nitrate reductase [NADH] 2 OS=Arabidopsis thaliana... [more]
NIA1_TOBAC1.129e-1234.16Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA_CICIN3.286e-1233.57Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
NIA2_HORVU4.292e-1234.25Nitrate reductase [NADH] (Fragment) OS=Hordeum vul... [more]
NIA_LEPMC1.249e-1132.28Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]

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Properties
Property NameValue
Genbank descriptionC31009F01EF AbioticL1 Citrus clementina cDNA clone C31009F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869199 ID=FC869199; Name=FC869199; organism=Citrus clementina; type=EST; length=684bp
GAGAGAAAGTGGTATACTTTTCTTTGCTTGCTTCTTCTCCAACATTAGAA
AATGGCTACGACCTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCAT
TCAACGAGGCATTTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGA
TTTCCCTTTGGAGCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTG
TTACTTTTCATCCCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGA
CGGGTCCAAAAATTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTG
CAAGACACTGCAAGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATT
TGATCCATCTGCCAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAA
GGGCTCCATTAGGACAAGATGCTGAAGGAAATACAAAATATGTTGTACGG
CCGTATACTCCTATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTT
AATTAAGGTTTATCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAA
AACCAGGGGATGTAGTTGAAGTGAAAGGACCCATCGAAAAGCTCCGATAC
TCTCCCAATATGAAGAAACACATCGGCATGATAGCTGGTGGCACAGGGTA
TACTCCTATGCTTCAGGTAAATTGAGCTATACTG
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