FC869199

Overview
NameFC869199
Unique NameFC869199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_SCHPO (NADH-cytochrome b5 reductase 1 OS=Schizosaccharomyces pombe GN=cbr1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 62/144 (43.06%), Postives = 84/144 (58.33%), Query Frame = 1
Query:  277 DKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQ------DAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            DK   F+L D A ++HN+ ++RF   P A   LGL          P+GQ      D +G  K   R YTP+S    KG+FDLL+K YP GK+S+ F+ LK GD + V+GP    ++   + +H GMIAGGTG TPMLQ+  A+L
Sbjct:   59 DKIQQFELSDKAVLNHNTAIYRFRL-PRANDVLGL----------PIGQHLKVFVDVDG--KEYSRSYTPLSSDADKGYFDLLVKSYPNGKVSKKFSELKIGDTIGVRGPKGNWKHRTGLARHFGMIAGGTGITPMLQIIRAVL 189          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_VANPO (NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = 1
Query:  280 KWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQV 669
            +++ F L    +++ NS ++RF        LGL +   I  +A +      +   VVR YTPIS D+EAKG+F+LLIK Y +GK+S+ F SLK GD ++V+GP     Y+    KH+ MIAGG+G TPM Q+
Sbjct:   42 EYMQFPLVSIKKLNRNSAIYRFKLPTDEHVLGLPIGQHITIKAHI------DGSEVVRSYTPISLDSEAKGYFELLIKSYEQGKISKMFTSLKIGDTIDVQGPKGFYEYTDRSSKHLAMIAGGSGLTPMYQI 167          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_MORAP (NADH-cytochrome b5 reductase 1 OS=Mortierella alpina GN=CBR1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  268 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKLGLDVASCILTRAPLGQD----AEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            ++P ++  FKL D    S N+ +++F+      L            P+GQ     A  N K + R YTP S ++  GHF L IK YP+G +S+ F+ L  GD +  +GP  +  Y+PNM + IGMIAGGTG TPMLQ+  AI+
Sbjct:   53 MDPKEYRKFKLVDKVHCSPNTAMYKFALPHEDDL---------LNLPIGQHISIMANINGKDISRSYTPTSSSDDVGHFVLCIKSYPQGNISKMFSELSIGDSINARGPKGQFSYTPNMCRAIGMIAGGTGLTPMLQIIRAIV 186          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R1_RAT (NADH-cytochrome b5 reductase 1 OS=Rattus norvegicus GN=Cyb5r1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 71/171 (41.52%), Postives = 94/171 (54.97%), Query Frame = 1
Query:  256 PKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGYTPMLQVN*AIL 684
            P++ L +PD+    +L D   VSHN+  FRF+  P+A   LGL V   +   A +      +   V+RPYTP++  E +G+ DL+IKVY +         GKMSQ+  SLK GDVVE +GP   L Y+        PN K        K +GMIAGGTG TPMLQ+  AIL
Sbjct:   36 PQVTLQDPDEKYLLRLLDKTTVSHNTRRFRFAL-PTAHHILGLPVGKHVYLSARI------DGSQVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFSEGGKMSQYLDSLKIGDVVEFRGPSGLLSYAGKGNFNIQPNKKSPPELRVAKKLGMIAGGTGITPMLQLIRAIL 199          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R1_MOUSE (NADH-cytochrome b5 reductase 1 OS=Mus musculus GN=Cyb5r1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 72/171 (42.11%), Postives = 95/171 (55.56%), Query Frame = 1
Query:  256 PKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PE-GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGYTPMLQVN*AIL 684
            P++ L +PD+    +L D   VSHN+  FRF+  P+A   LGL V   +   A +      +   V+RPYTP++  E +G+ DL+IKVY        PE GKMSQ+  SLK GD+VE +GP   L Y+        PN K        K +GMIAGGTG TPMLQ+  AIL
Sbjct:   36 PQVTLQDPDEKYLLRLLDKTTVSHNTRRFRFAL-PTAHHILGLPVGKHVYLSARI------DGSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKIGDMVEFRGPSGLLSYAGKGNFNIQPNKKSPPELRVAKKLGMIAGGTGITPMLQLIRAIL 199          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: MCR1_ASHGO (NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 65/179 (36.31%), Postives = 87/179 (48.60%), Query Frame = 1
Query:  151 FPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIA---LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQV 669
            F  G  A  A G  Y    S  NL       + TG   A       +W   K+    +VSH++  F F+      + GL  AS +L +   P G +       V+RPYTP+SD  A+G F L+IK Y  GK + H   LK  D VE KGPI+K R+ PNM   I ++  GTG TP+ Q+
Sbjct:   14 FALGTTAVAAAGYLYAQ--SRGNLSTSLNKGDVTGQAAAQTFTGDGQWHALKIAKIEQVSHDTRRFTFALPSQDHVTGLTTASALLAKYVTPKGSN-------VIRPYTPVSDNMARGMFQLVIKHYDGGKFTTHLFGLKENDTVEFKGPIQKWRWDPNMFDSIVLMGAGTGITPLFQM 183          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R1_BOVIN (NADH-cytochrome b5 reductase 1 OS=Bos taurus GN=CYB5R1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19
Identity = 70/170 (41.18%), Postives = 94/170 (55.29%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PE-GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGYTPMLQVN*AIL 684
            P   L+P++    +L D   V+HN+  FRF+  P+A   LGL V   +   A +      +   V+RPYTP++  E +G+ DL+IKVY        PE GKMSQ+  SLK GDVVE +GP   L Y+        PN K        +++GMIAGGTG TPMLQ+  AIL
Sbjct:   37 PVTLLDPNEKYQLRLLDKTTVNHNTKRFRFAL-PTAHHVLGLPVGKHVYLSARI------DGSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKIGDVVEFRGPSGLLTYAGKGKFNIQPNKKAPPEARVARNLGMIAGGTGITPMLQLIRAIL 199          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R1_HUMAN (NADH-cytochrome b5 reductase 1 OS=Homo sapiens GN=CYB5R1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19
Identity = 71/166 (42.77%), Postives = 92/166 (55.42%), Query Frame = 1
Query:  268 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKLRYS----------------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            L+P++    +L D   VSHN+  FRF+  P+A   LGL V   I     L    +G+   V+RPYTP++  E +G+ DL+IKVY        PEG KMSQ+  SLK GDVVE +GP   L Y+                P + K +GMIAGGTG TPMLQ+  AIL
Sbjct:   41 LDPNEKYLLRLLDKTTVSHNTKRFRFAL-PTAHHTLGLPVGKHIY----LSTRIDGSL--VIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAIL 199          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_CANGA (NADH-cytochrome b5 reductase 1 OS=Candida glabrata GN=CBR1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19
Identity = 53/132 (40.15%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  292 FKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AI 681
            F+L +  +++HN+  ++F   D S  LGL +   I  +  +G       K V R YTP S D E  G F+LL+K YPEG +S+H   +K G+ + + GP     Y PN+ KH+ M+AGGTG TPM Q+  AI
Sbjct:   45 FELVEKEQLTHNTAKYKFKLADESHVLGLPIGQHITVKTIIGG------KPVSRSYTPTSLDEECVGFFELLVKSYPEGNISKHIGDMKIGEKINISGPRGFYEYVPNVHKHLAMVAGGTGITPMFQIMKAI 170          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAST (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae GN=CBR1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19
Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  238 INEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AI 681
            I  +T P +    + +  F L +   ++HN+ +++F   P A   LGL +   I+ +A +      N K + R YTP S D + KG+F+LL+K YP G +S+    LK GD +++KGP     Y  N + H+GMIAGGTG  PM Q+  AI
Sbjct:   25 IGPKTKPVLDPKRNDFQSFPLVEKTILTHNTSMYKFGL-PHADDVLGLPIGQHIVIKANI------NGKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAI 168          
The following BLAST results are available for this feature:
BLAST of FC869199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
NCB5R_SCHPO5.058e-2143.06NADH-cytochrome b5 reductase 1 OS=Schizosaccharomy... [more]
NCB5R_VANPO9.540e-2041.67NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma ... [more]
NCB5R_MORAP9.540e-2039.16NADH-cytochrome b5 reductase 1 OS=Mortierella alpi... [more]
NB5R1_RAT9.540e-2041.52NADH-cytochrome b5 reductase 1 OS=Rattus norvegicu... [more]
NB5R1_MOUSE9.540e-2042.11NADH-cytochrome b5 reductase 1 OS=Mus musculus GN=... [more]
MCR1_ASHGO9.540e-2036.31NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii ... [more]
NB5R1_BOVIN1.246e-1941.18NADH-cytochrome b5 reductase 1 OS=Bos taurus GN=CY... [more]
NB5R1_HUMAN1.627e-1942.77NADH-cytochrome b5 reductase 1 OS=Homo sapiens GN=... [more]
NCB5R_CANGA2.125e-1940.15NADH-cytochrome b5 reductase 1 OS=Candida glabrata... [more]
NCB5R_YEAST3.625e-1937.09NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionC31009F01EF AbioticL1 Citrus clementina cDNA clone C31009F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869199 ID=FC869199; Name=FC869199; organism=Citrus clementina; type=EST; length=684bp
GAGAGAAAGTGGTATACTTTTCTTTGCTTGCTTCTTCTCCAACATTAGAA
AATGGCTACGACCTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCAT
TCAACGAGGCATTTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGA
TTTCCCTTTGGAGCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTG
TTACTTTTCATCCCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGA
CGGGTCCAAAAATTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTG
CAAGACACTGCAAGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATT
TGATCCATCTGCCAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAA
GGGCTCCATTAGGACAAGATGCTGAAGGAAATACAAAATATGTTGTACGG
CCGTATACTCCTATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTT
AATTAAGGTTTATCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAA
AACCAGGGGATGTAGTTGAAGTGAAAGGACCCATCGAAAAGCTCCGATAC
TCTCCCAATATGAAGAAACACATCGGCATGATAGCTGGTGGCACAGGGTA
TACTCCTATGCTTCAGGTAAATTGAGCTATACTG
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