FC869199

Overview
NameFC869199
Unique NameFC869199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 65/181 (35.91%), Postives = 90/181 (49.72%), Query Frame = 1
Query:  208 SSPNLVHLDQINEETGP--KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            SS N VH +       P  ++ALNP + I  KL     +SH+  L RF+     + +GL V + +   A + +      K  +R YTP S  +  G FDL++KVY +G          MSQH  SL  G VV+VKGP+  + Y+          P   K + M+AGGTG TP+ QV  AIL
Sbjct:  600 SSNNSVHGNSETTHLAPIREVALNPREKIPCKLLSKTSISHDVRLLRFALPAEDQVMGLPVGNHVFLCATVDE------KLCMRAYTPTSSVDEVGFFDLVVKVYFKGVHPNFPNGGIMSQHLDSLPIGSVVDVKGPLGHIEYTGRGNFLVHGKPRFAKRLTMLAGGTGITPIYQVVQAIL 774          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_YARLI (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica GN=CBR1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  292 FKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQV 669
            F L     +SHNS ++RF    PS  LGL +   +   A +G       K V+R YTP S D   KG+FD+LIK YP+G +S++ + L  GD ++V+GP     Y+  + +  GM+ GGTG TPM Q+
Sbjct:   52 FPLIQKTVLSHNSAIYRFGLPRPSHVLGLPIGQHVSLSANIGG------KEVLRSYTPTSSDLYDKGYFDILIKTYPQGNISKYVSELAIGDTMKVRGPKGNFVYNHGLVESFGMVCGGTGITPMYQI 173          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 71/193 (36.79%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  208 SSPN--------LVHLDQINEETG------PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            SSPN         +HL  INE T         +ALNP + I  KL     +SH+  LFRF      +L GL V   I   A +      + K  +R YTP S  E  G FDLLIKVY +         G MSQ+  SL  G +++VKGP+  + Y+              K + M+AGGTG TP+ QV  AIL
Sbjct:  597 SSPNNSVHGNSEFIHLAPINEITTIPPLPPRSVALNPRQKIPCKLVSKTSISHDVRLFRFEMPSKNQLLGLPVGKHIFLCATI------DGKLCMRAYTPTSSVEEVGFFDLLIKVYFKDVHPKFPNGGLMSQYLESLSIGSMLDVKGPLGHIEYTGRGNFTVNGKSRFAKRLAMLAGGTGITPIYQVAQAIL 783          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R3_RAT (NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus GN=Cyb5r3 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17
Identity = 65/174 (37.36%), Postives = 86/174 (49.43%), Query Frame = 1
Query:  244 EETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK----------------KHIGMIAGGTGYTPMLQVN*AIL 684
            + + P I L NPD     +L D   +SH++  FRF+   P   LGL +   I     L    +GN   V+RPYTP+S  + KG  DL++KVY           GKMSQ+  ++  GD +E +GP   L Y    K                K +GMIAGGTG TPMLQV  A+L
Sbjct:   28 QRSSPAITLENPDIKYPLRLIDKEIISHDTRRFRFALPSPQHILGLPIGQHIY----LSTRIDGNL--VIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVL 195          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA_VOLCA (Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 60/159 (37.74%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKL------RYSPNMK-----KHIGMIAGGTGYTPMLQV 669
            P + LNP + +   L +   ++ N+ +FRF    P  ++GL V   + T A +      N + V+R YTPIS  E  G  D+LIKVY        P+G KMSQHF SL+ GD VE KGP+          Y+ N K      H+  +AGGTG TP   V
Sbjct:  599 PLVVLNPRQKVKLPLIERIELNRNTRIFRFGLPSPQHRIGLPVGKHVFTYATI------NGENVMRAYTPISGDEELGRLDMLIKVYFANEHPAFPDGGKMSQHFESLRIGDTVEFKGPLGHFVYDGRGSYTLNGKLHKHATHMSFVAGGTGITPCYAV 751          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R2_CHICK (NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN=CYB5R2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 76/215 (35.35%), Postives = 98/215 (45.58%), Query Frame = 1
Query:  106 EAFGGQPKSDFNKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PE-GKMSQHFASLKPGDVVEVKGPIEKLRY--------SPNMK--------KHIGMIAGGTGYTPMLQV 669
            EAF G P            A+AAVA  V          L+ L       G  + L +P       L     +SH++  FRF    P   LGL V   +   A +      N   V+R YTP+S  E KG+ DL+IKVY        PE GKMSQ+  S+K GDV++ +GP   L Y         P+ K        KH+G+IAGGTG TPMLQ+
Sbjct:    2 EAFSGTPV---------VVAVAAVAATVLL--------LLLLRGAGRRPGRPVTLRDPQAKYPLPLVGKEEISHDTKKFRFGLPSPDHVLGLPVGQHVYLSAKI------NGNLVIRAYTPVSSDETKGYVDLIIKVYYKNVNPKFPEGGKMSQYLDSMKIGDVIDFRGPNGLLVYKGSGTFMIKPDKKSEAQRKFAKHLGVIAGGTGITPMLQL 193          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: YMI7_YEAST (Uncharacterized oxidoreductase YML087C OS=Saccharomyces cerevisiae GN=YML087C PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 47/140 (33.57%), Postives = 76/140 (54.29%), Query Frame = 1
Query:  253 GPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQV 669
            G   +L  +KW+   L    R+S N+ L+ F    P  +L + +   +  R  +      N + +VR YTP++    +GH +L++K Y  G +S++F  LK    VE KGP+ +L Y  +    +G+IAGG+G TP+LQV
Sbjct:   62 GTDKSLYRNKWVALPLSKKTRISRNTSLYCFKLKYPFERLHIPMGYHLAVRVTI------NGERLVRYYTPVNVPNTEGHLELVVKTYKHGVVSKYFDKLKIRQYVEFKGPLGELEYDQDTATELGIIAGGSGITPVLQV 195          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 69/192 (35.94%), Postives = 95/192 (49.48%), Query Frame = 1
Query:  202 YFSSPNL-VH--------LDQINEETGPK-IAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            Y SSPN+ VH        L  I E T  K IAL NP + I  +L +   +SH+   FRF+      +LGL V   +   A +      N K  +R YTP S  +A GH DL++KVY +         G MSQH  SL  G ++++KGP+  + Y           P   K + M+AGGTG TP+ Q+  +IL
Sbjct:  624 YDSSPNVSVHGASNFGPLLAPIKELTPQKNIALVNPREKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVCANI------NDKLCLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKGPLGHIEYKGKGNFLVSGKPKFAKKLAMLAGGTGITPIYQIIQSIL 809          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R3_MOUSE (NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=Cyb5r3 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16
Identity = 65/174 (37.36%), Postives = 86/174 (49.43%), Query Frame = 1
Query:  244 EETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK----------------KHIGMIAGGTGYTPMLQVN*AIL 684
            + + P I L NPD     +L D   +S ++  FRF+   P   LGL +   I     L    +GN   V+RPYTP+S  + KG  DL++KVY           GKMSQ+  ++K GD +E +GP   L Y    K                K +GMIAGGTG TPMLQV  A+L
Sbjct:   28 QRSTPAITLENPDIKYPLRLIDKEVISPDTRRFRFALPSPQHILGLPIGQHIY----LSTRIDGNL--VIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMKIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVL 195          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA2_SOYBN (Inducible nitrate reductase [NADH] 2 OS=Glycine max GN=INR2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 67/181 (37.02%), Postives = 89/181 (49.17%), Query Frame = 1
Query:  211 SPNLVHLDQINEETGP--KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL--GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            S + + L  I E   P   +ALNP + I  KL     +SH+  LFRF+  PS  L  GL V   I   A + +      K  +R YTP S     G+FDL++KVY +G          MSQH  SL  G V++VKGP+  + Y+          P     + M+AGGTG TP+ QV  AIL
Sbjct:  610 SSDTIPLTPIKEVITPMRSVALNPREKIPCKLISKTSISHDVRLFRFAL-PSDDLLMGLPVGKHIFLCATVDE------KLCMRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPTGGIMSQHLDSLPIGSVLDVKGPLGHIVYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVRAIL 783          
The following BLAST results are available for this feature:
BLAST of FC869199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
NIA1_PHAVU1.989e-1735.91Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NCB5R_YARLI1.989e-1739.84NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolyt... [more]
NIA2_PHAVU2.598e-1736.79Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
NB5R3_RAT2.598e-1737.36NADH-cytochrome b5 reductase 3 OS=Rattus norvegicu... [more]
NIA_VOLCA4.431e-1737.74Nitrate reductase [NADH] OS=Volvox carteri GN=NITA... [more]
NB5R2_CHICK5.787e-1735.35NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN... [more]
YMI7_YEAST1.289e-1633.57Uncharacterized oxidoreductase YML087C OS=Saccharo... [more]
NIA1_ARATH1.684e-1635.94Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NB5R3_MOUSE1.684e-1637.36NADH-cytochrome b5 reductase 3 OS=Mus musculus GN=... [more]
NIA2_SOYBN2.199e-1637.02Inducible nitrate reductase [NADH] 2 OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionC31009F01EF AbioticL1 Citrus clementina cDNA clone C31009F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869199 ID=FC869199; Name=FC869199; organism=Citrus clementina; type=EST; length=684bp
GAGAGAAAGTGGTATACTTTTCTTTGCTTGCTTCTTCTCCAACATTAGAA
AATGGCTACGACCTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCAT
TCAACGAGGCATTTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGA
TTTCCCTTTGGAGCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTG
TTACTTTTCATCCCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGA
CGGGTCCAAAAATTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTG
CAAGACACTGCAAGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATT
TGATCCATCTGCCAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAA
GGGCTCCATTAGGACAAGATGCTGAAGGAAATACAAAATATGTTGTACGG
CCGTATACTCCTATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTT
AATTAAGGTTTATCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAA
AACCAGGGGATGTAGTTGAAGTGAAAGGACCCATCGAAAAGCTCCGATAC
TCTCCCAATATGAAGAAACACATCGGCATGATAGCTGGTGGCACAGGGTA
TACTCCTATGCTTCAGGTAAATTGAGCTATACTG
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