FC869199

Overview
NameFC869199
Unique NameFC869199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 60/161 (37.27%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  262 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +ALNP   I  KL +   +SH+   FRF      + LGL V   I   A +      + K  +R YTP S  +  G+FDL++KVY +         G MSQH  SL  G +V+VKGP+  + Y           P   K + MI+GGTG TP+ QV  AIL
Sbjct:  665 VALNPRVKIPCKLIEKVSLSHDVRRFRFGLPSEDQVLGLPVGKHIFLCANV------DDKLCMRAYTPSSTIDVVGYFDLVVKVYFKDVHPRFPNGGVMSQHLDSLSLGSIVDVKGPLGHIEYLGKGNFTVHGKPKFAKKLAMISGGTGITPIYQVMQAIL 819          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R2_MOUSE (NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=Cyb5r2 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 1
Query:  271 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKV--------YPE-GKMSQHFASLKPGDVVEVKGPIEKLRYS--------------PNMK--KHIGMIAGGTGYTPMLQV 669
            +P+      L +  ++SHN+  FRF    P   LGL V + +   A +      N + V+R YTP+S  + +G  DL+IK+        YPE GKM+Q+  ++K GD +  +GP  +L Y+              P  K   H+GMIAGGTG TPMLQ+
Sbjct:   13 DPEAKYPLPLIEKEQISHNTRRFRFGLPSPDHVLGLPVGNYVHLLAQI------NNELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGTLLIKANKTSEPEKKLVHHLGMIAGGTGITPMLQL 165          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA7_HORVU (Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=NAR-7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 56/158 (35.44%), Postives = 77/158 (48.73%), Query Frame = 1
Query:  271 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            NP + +  +L D   +SHN  LFRF+   P  KLGL V   +   A  G       K  +R YTP S  E  GH +LLIK+Y           G MSQ+  +L  G  V++KGP+  + Y+              + + M+AGGTG TP+ QV  A+L
Sbjct:  628 NPREKVRCRLVDKKSMSHNVRLFRFALPSPDQKLGLPVGKHVYVCASTGG------KLCMRAYTPTSSVEEVGHVELLIKIYFKDEDPKFPAGGLMSQYLDALPLGAPVDIKGPVGHIEYAGRGAFTVGGERRFARRLAMVAGGTGITPVYQVIQAVL 779          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R2_RAT (NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus GN=Cyb5r2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 55/159 (34.59%), Postives = 82/159 (51.57%), Query Frame = 1
Query:  271 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKV--------YPE-GKMSQHFASLKPGDVVEVKGPIEKLRYS--------------PNMK--KHIGMIAGGTGYTPMLQV 669
            +P+      L +  +++HN+  FRF    P   LGL V + +   A +      N + V+R YTP+S  + +G  DL+IK+        YPE GKM+Q+  ++K GD +  +GP  +L Y+              P  K   H+GMIAGGTG TPMLQ+
Sbjct:   13 DPEAKYPLPLIEKEQINHNTRRFRFGLPSPDHVLGLPVGNYVHLLAQI------NNELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGTLLIKTDKTSEPEKKLVHHLGMIAGGTGITPMLQL 165          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 69/192 (35.94%), Postives = 91/192 (47.40%), Query Frame = 1
Query:  202 YFSSPNL-VH--------LDQINEETGPK-IAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            Y SSPN+ VH        L  I E    K IAL NP + +   L +   +SH+   FRF+      +LGL V   I   A +      N K  +R YTP S  +A GH DL++KVY +         G MSQH  SL  G V+ +KGP+  + Y           P   K + M+AGG G TP+ QV  +IL
Sbjct:  618 YDSSPNVSVHGGSTAVSLLAPIKELAPSKNIALVNPREKVPVTLIEKTSISHDVRRFRFALPSEDQQLGLPVGKHIFLCANI------NDKLCLRAYTPTSTVDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSVLNIKGPLGHIEYLGKGNFMVTGKPKFAKKLAMLAGGPGITPIYQVIQSIL 803          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 59/178 (33.15%), Postives = 87/178 (48.88%), Query Frame = 1
Query:  217 NLVHLDQINEE-TGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD--PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            N  HL  I E     ++AL P++ I  KL     +SH+  +FRF+        LGL V   I   A +      + K  +R YTP S  +  G F+L++KVY +G          MSQ+  S++ G  ++VKGP+  + Y+          P   + + M+AGGTG TP+ QV  AIL
Sbjct:  640 NFSHLAPIREAPVSRRVALAPNEKIPCKLISKTSISHDVRVFRFALPGGQDQALGLPVGKHIFICATV------DGKLCMRAYTPTSSIDEMGFFELVVKVYFKGVHPKFPNGGIMSQYLDSMEVGSTLDVKGPLGHIEYTGRGNFMVHGKPRFARRLAMLAGGTGITPIYQVVQAIL 811          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R2_DANRE (NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=cyb5r2 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 56/164 (34.15%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGYTPMLQV 669
            PK   +P       L +   ++H++  FRF    S+  LGL +   I   A +      N   VVR YTP+S  + +G+ DL++KVY +         GKMSQ+  ++K GD ++ +GP   L Y+        P+ K        KH+ MIAGGTG TPMLQ+
Sbjct:   41 PKALQDPSVKYPLPLIEKEEINHDTKRFRFGLPSSSHVLGLPIGQHIYLSAKV------NGSLVVRAYTPVSSDQDQGYVDLVVKVYYKNTHPSYPDGGKMSQYLDNMKIGDTIDFRGPNGLLVYNGKGKFAIRPDKKSEAEVRKFKHVAMIAGGTGITPMLQL 198          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 62/176 (35.23%), Postives = 82/176 (46.59%), Query Frame = 1
Query:  223 VHLDQINEETGP--KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            + L  I E   P   +AL P + I  KL     +SH+  LFRF       L GL V   I     + +      K  +R YTP S     G+FDL++KVY +G          MSQH  SL  G V++VKGP+  + Y+          P     + M+AGGTG TP+ QV  AIL
Sbjct:  610 IPLTPIKEVITPMRSVALIPREKIPCKLISKTSISHDVRLFRFGLPSDGLLMGLAVGKHIFLCVTVDE------KLCMRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPNGGIMSQHLDSLPIGSVLDVKGPLGHIEYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVQAIL 779          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R5_MOUSE (NADH-cytochrome b5 reductase-like OS=Mus musculus GN=Cyb5rl PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 43/134 (32.09%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  268 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQV 669
            L+P+ ++ F +    +V+ +++L RF+   +++LGL     ++ R  +      +   + R YTPIS   A+G+FD+LIK Y  G MSQ+  S + GD    +GP     Y P     + M+A GTG  PM+ +
Sbjct:   73 LSPETFLAFHISTMEKVTKDTYLVRFTLPGNSRLGLRPGQHLILRGVV------DGLEIQRAYTPISPVTAEGYFDVLIKCYRTGLMSQYVESWRTGDTAFWRGPFGSFLYEPKKYGELLMLAAGTGLAPMVPI 200          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NB5R2_HUMAN (NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=CYB5R2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 1
Query:  271 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKLRY----------------SPNMKKHIGMIAGGTGYTPMLQV 669
            +P+      L +  ++SHN+  FRF    P   LGL V + +   A +      + + VVR YTP+S  + +G  DL+IK+Y        PEG KM+Q+  ++K G+ +  +GP  +L Y                   +  H+GMIAGGTG TPMLQ+
Sbjct:   13 DPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKI------DNELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQL 165          
The following BLAST results are available for this feature:
BLAST of FC869199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
NIA_SPIOL6.399e-1637.27Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NB5R2_MOUSE1.425e-1535.22NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=... [more]
NIA7_HORVU1.862e-1535.44Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=... [more]
NB5R2_RAT3.176e-1534.59NADH-cytochrome b5 reductase 2 OS=Rattus norvegicu... [more]
NIA2_BRANA5.417e-1535.94Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA_CUCMA7.075e-1533.15Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NB5R2_DANRE7.075e-1534.15NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=c... [more]
NIA1_SOYBN9.240e-1535.23Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]
NB5R5_MOUSE9.240e-1532.09NADH-cytochrome b5 reductase-like OS=Mus musculus ... [more]
NB5R2_HUMAN1.207e-1433.33NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31009F01EF AbioticL1 Citrus clementina cDNA clone C31009F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869199 ID=FC869199; Name=FC869199; organism=Citrus clementina; type=EST; length=684bp
GAGAGAAAGTGGTATACTTTTCTTTGCTTGCTTCTTCTCCAACATTAGAA
AATGGCTACGACCTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCAT
TCAACGAGGCATTTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGA
TTTCCCTTTGGAGCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTG
TTACTTTTCATCCCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGA
CGGGTCCAAAAATTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTG
CAAGACACTGCAAGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATT
TGATCCATCTGCCAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAA
GGGCTCCATTAGGACAAGATGCTGAAGGAAATACAAAATATGTTGTACGG
CCGTATACTCCTATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTT
AATTAAGGTTTATCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAA
AACCAGGGGATGTAGTTGAAGTGAAAGGACCCATCGAAAAGCTCCGATAC
TCTCCCAATATGAAGAAACACATCGGCATGATAGCTGGTGGCACAGGGTA
TACTCCTATGCTTCAGGTAAATTGAGCTATACTG
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