FC869201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: TPSD2_PICAB (Isopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-ISO PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13 Identity = 45/124 (36.29%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 275 VNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNN---DLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKG---LLCLYEASYLRVQGENILEEACEFSRKHLKSLL 628 V+ ++RLG+ +HF+ EIK+AL +Y SH + + + N D+ A+ R+LR HGY VS+D+ K FRDE GEF L +G +L + S++ GE I++EA + ++L++ L Sbjct: 358 VDTVERLGIDHHFKEEIKDALDYVY-SHWDER-GIGWARENPIPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMQEAKLCTERYLRNAL 479
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: TPSD1_GINBI (Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-13 Identity = 46/124 (37.10%), Postives = 70/124 (56.45%), Query Frame = 2 Query: 275 VNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNN---DLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGL---LCLYEASYLRVQGENILEEACEFSRKHLKSLL 628 V+ ++RLG+ +F+ EIKE+L +Y + + V + N D+ A+ R+LR HGY VS+D+ + FRDEKG+F G+ L LY S + GE I+EEA F+ HL++ L Sbjct: 362 VDTVERLGIDRYFKKEIKESLDYVY-RYWDAERGVGWARCNPIPDVDDTAMGLRILRLHGYNVSSDVLENFRDEKGDFFCFAGQTQIGVTDNLNLYRCSQVCFPGEKIMEEAKTFTTNHLQNAL 484
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: KSA_PEA (Ent-copalyl diphosphate synthase, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.784e-12 Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 254 LEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHV---NGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGE---FKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLK 619 L E + +V++L+RLG++ F +EIK+ + Y S + G C + D+ A+ FRLLR HG++VSA +FK F + GE F T G+ L+ AS + GE ILE A FS K LK Sbjct: 324 LFEHIWVVDRLERLGISRFFRHEIKDCMN--YVSKIWSEKGICWARNSNVQDIDDTAMAFRLLRLHGHQVSAHVFKHF-ERNGEFFCFAGQCTQAVTGMYNLFRASQVLFPGEKILEHAKHFSAKVLK 448 The following BLAST results are available for this feature:
BLAST of FC869201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869201 ID=FC869201; Name=FC869201; organism=Citrus clementina; type=EST; length=630bpback to top |