FC869206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.253e-43 Identity = 80/99 (80.81%), Postives = 91/99 (91.92%), Query Frame = 2 Query: 146 TDKIIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF 442 +D+IIAEYIWIG SG+D+RSK+RT+ PV DPS+LPKWNYDGSSTGQAPGEDSEVILYPQAIF+DPFR GNNILV+CD +TPAGEPIPTNKR AA+IF Sbjct: 74 SDRIIAEYIWIGGSGIDLRSKSRTIEKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTWTPAGEPIPTNKRAKAAEIF 172
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLN13_ORYSJ (Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 5.020e-43 Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 2 Query: 146 TDKIIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF 442 TDK+IAEYIW+G +GMD+RSKARTL GPV DPSKLPKWN+DGSSTGQA G+DSEVIL+PQAIF+DPFR+G NILVMCD Y P GEPIPTN R+ AA+IF Sbjct: 18 TDKVIAEYIWVGGTGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIF 116
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 5.550e-42 Identity = 81/99 (81.82%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 146 TDKIIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF 442 TDK IAEYIWI G +RSKARTL GPV DP+KLPKWN+DGSSTGQ PG+DSEVI+YPQAIFKDPFRRGN+ILVMCD YTPAGEPIPTNKR AAKIF Sbjct: 16 TDKFIAEYIWIDAVG-GLRSKARTLSGPVDDPTKLPKWNFDGSSTGQGPGDDSEVIIYPQAIFKDPFRRGNHILVMCDTYTPAGEPIPTNKRCNAAKIF 113
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA_PINSY (Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.367e-40 Identity = 78/99 (78.79%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 146 TDKIIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF 442 T+K+IAEYIWIG SGMDMRSKAR+L GPVS +LPKWNYDGSSTGQA G DSEVILYPQAIF+DPFRRG +ILV+CDAY+P G IP+NKR AAAKIF Sbjct: 17 TEKVIAEYIWIGGSGMDMRSKARSLSGPVSSVKELPKWNYDGSSTGQAQGHDSEVILYPQAIFRDPFRRGKHILVICDAYSPNGTAIPSNKRAAAAKIF 115
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 4.126e-29 Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = 2 Query: 152 KIIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTP----------AGEPIPTNKRHAAAKI 439 KI AEY+WIG S D+RSK+RTL + P LP WNYDGSSTGQAPG DSEV L P++IFKDPFR G+NILVMCD Y P A +PIPTN R A A++ Sbjct: 37 KICAEYVWIGGSMHDVRSKSRTLSTIPTKPEDLPHWNYDGSSTGQAPGHDSEVYLIPRSIFKDPFRGGDNILVMCDCYEPPKVNPDGTLAAPKPIPTNTRFACAEV 142
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA_ASHGO (Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.816e-24 Identity = 52/96 (54.17%), Postives = 67/96 (69.79%), Query Frame = 2 Query: 155 IIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF 442 +IAEYIW+ +G +RSK RTL V +LP+WN+DGSSTGQAPG DS+V L P A + DPFRRG+NI+V+ + + G P N RH AAK+F Sbjct: 23 VIAEYIWVDSAG-HLRSKGRTLQRRVESVDELPEWNFDGSSTGQAPGHDSDVYLKPVAFYPDPFRRGDNIIVLAECWNNDGTPNKYNHRHEAAKLF 117
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 8.902e-24 Identity = 52/93 (55.91%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 161 AEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKI 439 A Y+WI +G D+R K RTL P +LP WNYDGSS QA G +S+ LYP AI+KDPFRRGNNILVMCD Y G P TNKR ++ Sbjct: 34 ATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEV 126
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23 Identity = 52/96 (54.17%), Postives = 66/96 (68.75%), Query Frame = 2 Query: 155 IIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF 442 IIAEY+WI G +RSK RTL V+ LP+WN+DGSSTGQAPG DS++ L P A + DPFRRG+NI+V+ + + G P N RH AAK+F Sbjct: 26 IIAEYVWIDSEG-GLRSKGRTLNKKVTSVDSLPEWNFDGSSTGQAPGHDSDIYLKPVAFYPDPFRRGDNIVVLAECWNNDGTPNKFNHRHEAAKLF 120
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA_YEAST (Glutamine synthetase OS=Saccharomyces cerevisiae GN=GLN1 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.590e-23 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 152 KIIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF 442 +IIAEY+WI +G ++RSK RTL ++ +LP+WN+DGSST QAPG DS++ L P A + DPFRRG+NI+V+ Y G P N RH AAK+F Sbjct: 23 RIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLF 118
BLAST of FC869206 vs. ExPASy Swiss-Prot
Match: GLNA_CANGA (Glutamine synthetase OS=Candida glabrata GN=GLN1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 7.536e-23 Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 152 KIIAEYIWIGRSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF 442 K+IAEY+W+ +G ++RSKARTL ++ +LP+WN+DGSST QAPG DS++ L P A + DPFRRG+NI V+ + + G P N RH A K+F Sbjct: 23 KVIAEYVWVDGTG-NLRSKARTLNKVITSIEQLPEWNFDGSSTNQAPGYDSDIYLKPVAFYPDPFRRGDNITVLAECFNSDGTPNKFNHRHEANKLF 118 The following BLAST results are available for this feature:
BLAST of FC869206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869206 ID=FC869206; Name=FC869206; organism=Citrus clementina; type=EST; length=443bpback to top |